Oncorhynchus nerka (sockeye salmon): 115143265
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Entry
115143265 CDS
T07952
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115143265
03036 Chromosome and associated proteins [BR:
one03036
]
115143265
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115143265
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
115143265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
115143265
NCBI-ProteinID:
XP_029539338
EnsemblRapid:
ENSONEG00000037370
LinkDB
All DBs
Position
LG15:39754382..39877546
Genome browser
AA seq
1303 aa
AA seq
DB search
MSTVNYQQQQREEEEEEDEEQGEKFEFDDSADEKDAVEAMQTANESSMEATSQPQDNAVT
TPLAHSQQNLNAMPPAGQEDNPSQGQDSTASSDVPVSNPPKRVSGPVDLVEPIAAAPSVG
EQPREESQERSGPGDMLPVENQTDSEDHSVETEKKSSSLREHSEGEGVDDDEAEAALQTG
SPEVIYDDVPCEGPLSPDEGDMIYEDVHRDEMPQGAGNGWSSSEFESYDEQSDTESKLPT
RSKQYSPDVRRLRERCARTKREIAMRLGGKSNYDTKVHQLMKAARSGTKDGLDKTKIAFM
RRVSFLHKKDHSEDVEDDAGYLDVAVSEVKQPPAQLSPMPEGLSSQQVVRRHILGSIIQS
ERSYLESLRRILQEYQRPLLEADPRILSPRKIRPIFHRLREITQCHSMFQIALASRVAEW
DSSEKIGDLFVASFSKSMVLDVYSDYVNNFTNAMALIKKACMSKPAFLEFLKKKQASSID
RITLYGLMVKPIQRFPQFILLLQDMLKNTPKGHVDRLPVQLALTELEMLAEKLNEQKRVA
DQIAETQQLARSVSDRLLCKQLNSDQGSLVLCETLIETVYGERGQVLKSKERKVFLFNDI
LICANINIKGPPDISSLVPVGPKYTMKWSAPLLQVQVVEVGQEASQAKDTLFQHGGAKHP
GSACPPGKVILGPPRLYQELQELQHDLSVVEEISLLVGTLQGTYQNLNTTVAQDWCLALQ
RLIRIKEDQIQSANKCRLRLQVPGRPDKSGRPVSFMVVFNTPSPLSKISWVNRLHLAKVA
QREENTPGWLCAEDEDEGKTMAPFWPLLTCRVPVFATKSSDRKLEAALHNPVQCALLGFS
AASTSLPQGYLWVASGGDATQGQVEIFSLNRPTPRPVKSLQVGAPVRCLEYVPEPSTPEE
MEAVALRSPTGVGNTICLGLDDGSILVYGSVDTAAQCLLTLCNPQRCPVLCLKHSINFLF
AGLRDGTMMVYGRSNGGELWEPDTCRTVSVGPEPVRTLLVLEDSVWASCANSVTVIKGSS
LSTQRFEVHPEPMVSVAHMVRAGGGVWMAFSEGSSIRLFHTETLEHLQEINISTRVSLHN
PGQKSMRVTSLLLCQGLLWVGTAQGVIITLPVPKLEGIPKITGKGMTSLNAHCGPVDFLV
ATSSTLSAELLKRDSVGDGPDSACGGEDRSDSSSQESLQQSGCSQGEGRGKGRGVLLQYR
LRSTSGLPGRALTARGDEASDSSLESLEQRLEDGSIYELSDDPEMWVRGRPCERDRGRRD
RVTSAAVISGGRGFQRLREGTAERTGVEASETTLMVWQLPLTV
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgtgaattatcagcagcaacagagggaggaagaggaggaggaagatgaagag
caaggagagaagtttgagtttgatgacagtgctgatgagaaagacgcagtggaagccatg
caaacggcaaacgagtcatctatggaggccacaagccaaccacaggacaatgcagtaaca
acaccccttgcacactcacaacagaacctcaatgcaatgccccctgctggtcaggaggac
aatccctcacagggacaagactccacggcctcttcagatgttccagttagcaacccaccc
aagcgggtctctggcccggtcgacctggttgagcccatcgctgcagcaccttcagttgga
gagcagccccgggaggagtcccaggaaaggtctggtcctggagacatgttaccagtggag
aaccagaccgactccgaggaccatagcgtggagactgagaagaagagctccagcttgaga
gaacactctgaaggtgagggggtggatgatgatgaggccgaagcagcactccagacaggg
agcccggaggtgatctatgatgacgtgccctgtgagggaccactctcccctgacgaaggg
gacatgatctatgaggatgtgcacagagatgaaatgccccagggtgcaggcaatggttgg
agctccagtgagtttgaaagttacgacgagcagtctgataccgagagcaagctaccaacc
cgcagcaagcagtactcccctgacgtgcgtcggctgagggagcgttgtgccaggaccaaa
cgtgaaatagccatgaggctgggtgggaaaagcaactatgacaccaaggttcatcagcta
atgaaggccgctagaagtgggaccaaggatggattggacaagaccaaaatagccttcatg
cggagagtctccttcctgcacaagaaggaccactcagaggatgtggaggatgatgcaggg
tacctggatgtggctgtgtcggaggtgaaacagcctcctgcacagctgagccccatgcct
gaggggctgagcagccagcaggtggtcagacgccacatcctgggttccatcattcagagt
gagcgcagttatcttgagtccctcaggagaatccttcaggagtaccagaggcccttgcta
gaggcggacccacgcatcctgagcccacggaagatccggcccatatttcaccgtctacgg
gagatcactcagtgtcactccatgttccagatcgcactggcatcacgtgtggctgagtgg
gacagcagcgagaagattggggacctatttgtggcctcgttttccaagtccatggtgcta
gatgtttacagcgactatgtcaataacttcaccaatgccatggccctcataaaaaaggca
tgcatgtccaaaccagctttcctggaattcttaaagaagaagcaggcgtccagtattgat
cggatcaccctgtacggcctcatggtgaagcccatccaacgctttccccagttcatccta
ttactgcaggacatgctgaagaacacacctaagggtcatgtagaccgcctgcctgtgcag
ctggctctgactgaactggagatgctggccgagaagctgaatgaacagaaacgtgtggcc
gaccaaatagctgagactcagcagctagcacgcagtgtcagcgaccgcttgctctgcaag
caactgaactcagaccaggggtcactggtgctttgtgagacgttgattgagacggtgtac
ggggagcgtggccaggtcctgaagtctaaggagcgcaaagtcttcctcttcaatgacata
ctcatctgtgccaacatcaacatcaaggggccccctgatatcagcagcctggtccctgtt
gggccaaagtacacgatgaagtggagtgcccccctgctgcaggtccaggtggtggaggtg
ggtcaggaggcctcccaggccaaggataccttgttccagcatggcggtgccaagcaccct
ggcagtgcctgtcccccagggaaggtgatcctgggtcctcctcggctctaccaggagctc
caggagctgcagcacgacctgtctgtggtagaggagatctcactactggtgggaacgcta
caggggacataccagaacctgaacacgaccgtggcccaggactggtgtctagctctccag
agactcatccggatcaaggaggatcagattcagagtgccaacaagtgccgcttacgcctg
caggtgcctggaagaccagacaagtcgggacgtcccgtcagcttcatggtggttttcaac
acccccagtcccctcagcaagatctcctgggtcaaccggctgcacctggccaaggtcgca
cagcgagaggagaacacaccaggatggttgtgtgcagaagatgaagatgaagggaagacc
atggcaccattttggcctttactcacctgccgtgtgcctgtcttcgccaccaaatcctcg
gacaggaagcttgaagctgcccttcacaatccggtgcagtgtgctttgctgggcttctct
gcagcgagcacctcgctacctcaaggctatctctgggtggccagtggaggagatgctacc
caggggcaggtggagatcttctccctgaacaggcccacaccacgcccagtgaagagcctc
caggtgggggccccagtgaggtgtctggagtatgtgcctgaacccagcaccccagaggag
atggaggctgtggccctcaggagccctactggggtggggaacaccatttgtctgggactg
gatgatggaagcatcctggtgtatggcagtgtggacactgcagcccagtgcctgttgacc
ctgtgtaaccctcagcgctgtcctgtcctgtgcctcaaacactccatcaacttcctgttc
gctgggctcagagatggaaccatgatggtgtatggacgaagtaatggtggtgagctgtgg
gagccagacacctgcaggactgtgagtgtgggcccggagcctgtgcgaactcttctggta
ctggaggactctgtgtgggccagctgtgccaactctgtgactgtcatcaagggctccagc
ctttccactcagaggtttgaggtgcacccagaacccatggtgagcgtggcccatatggtg
cgggctggaggaggagtctggatggcctttagtgaaggctcttctattcgcctgttccac
actgagacactggagcatctgcaggaaatcaatatctccacacgagtatctttgcacaac
ccaggccagaagagcatgcgtgtcaccagcctgctcctctgccaggggcttctgtgggtg
gggactgcccagggagtcatcatcaccctgcccgtgcccaaactggagggcattcccaaa
ataacaggaaaggggatgacctctctgaatgcccactgtggtccggtggacttcctggtg
gccacctccagcaccctgtccgcagagctgctgaagagggactctgtgggggatggaccc
gactctgcctgcggaggggaggaccgcagtgactcctcctcccaggagtctctgcagcag
tcaggctgctcccagggggaggggcggggcaaggggcggggtgtgctgctacagtacagg
ctacgctccacgtcggggttgccggggcgagcactgacggcacggggcgacgaggcgtct
gactcctctctggaatctctggaacaaagactggaggacggctccatctatgagctcagt
gacgaccctgagatgtgggtgcgggggcgcccctgtgagcgagatagggggcgtagggac
agggtgacctcggccgcggtcatatctgggggcaggggcttccaaagactgagggaaggg
acagcagagcgcacgggtgtggaggcttcagaaacaaccctgatggtatggcaactgcca
ctaactgtgtga
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