Oncorhynchus nerka (sockeye salmon): 115144126
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Entry
115144126 CDS
T07952
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04510
Focal adhesion
one04512
ECM-receptor interaction
one04810
Regulation of actin cytoskeleton
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115144126 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115144126 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
115144126 (itgb4)
04810 Regulation of actin cytoskeleton
115144126 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115144126 (itgb4)
04515 Cell adhesion molecules [BR:
one04515
]
115144126 (itgb4)
04090 CD molecules [BR:
one04090
]
115144126 (itgb4)
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
115144126 (itgb4)
Exosomal proteins of bladder cancer cells
115144126 (itgb4)
Cell adhesion molecules [BR:
one04515
]
Integrins
Integrin beta subunits
115144126 (itgb4)
CD molecules [BR:
one04090
]
Proteins
115144126 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Integrin_B_tail
Pur_ac_phosph_N
Calx-beta
PSI_integrin
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
115144126
NCBI-ProteinID:
XP_029540734
EnsemblRapid:
ENSONEG00000037739
LinkDB
All DBs
Position
LG16:complement(15690924..15723126)
Genome browser
AA seq
2029 aa
AA seq
DB search
MREMGRWTLNLLVGVVLLAVLTASCYAEKVNHCLATRASTCSECIQSGKGCAYCPDEIFD
GPRCDLHDNIISRGCNSAVTAKSSMSMERNEQIDMLLKQSQVAPQEMSMTLLPGEEREIE
MEVFEPAKGPLDLYILMDFSNSMEDDLDNLKRMGAELAALVGKLSDDYTIGFGKFVDKVV
EPQTDMRPSKLAKPWPNSDPPFSFRHVITLTPDLRSFTEKLQKERISGNLDAPEGGFDAI
LQAAVCGEKIGWRSHATHLLVFSTESAFHYEADGANVLAGIMPRNDEQCHLDPEGKYTED
TRQDYPSVPTLVRLLGKHNIIPIFAITNHSFTYYQKLYEYFPIAELGLLQEDSANILNIL
EKAFENIRSKISIRAEDRPKAIEAQVLSYSGSVAQAGTFKVKPGQIGKFKVRVKASEMVG
EQHVCSLEQGDKKGKMRVKPTTFSTALNINAEVLCQTCDCEKTPTKNAVRCTGHGDLVCG
KCRCYSGWLGPFCNCSTSASPVAGSSCLGPDAGEPCSGRGDCLCGTCVCYNTDQYEGPLC
QFDKSQCQRYGGFLCNDRGRCFMGQCACAEGWEGPACECPMSNQTCLDTKGGVCNGRGVC
KCGRCECQDSGLAMTPTCEANFQAQLGMCEDKRSCVQCQAWKTGEKKDSDQCDQCQFKVV
MVDELKENKEVIEACSFRDEDDDCTYHYTVDYPEEQTDKELEVQVLKKKDCPPAGFLWLI
PLIMFLMLLLGLLLLCCWKYCACCKACLALLPCCGRGRMVGFKEDQYMLRQSLLTSDHLD
TPLVRTGPPKSTDVVRWKITDNVHRSPNHPLAQVQPNPKETIQFPLSLRLNRLFTEGLSH
PDARDTETLRREVDDNLNEVYKHVPGAQRVQNTKFRLQRNAGKRKDHTIVDTVVSAPRSS
YPDIVKLTEKNVQSGNFQDLKVVPGYYTVATDREAAGAVEFQEGVETVDVRVPLFIKEDD
DDKKQLQVEAVDVPLGIAEIGKRFVNITIIKEHAKSIMSFLQPSYTYSRQDRVANIPISR
EIIEDGHTQVTYRTRDLTAKDKKDYVTVDGELSYGPGETQQTVPVRLLELGEGDGLLKDT
QVKQFVMDLSNPRQGAKLGRYPRTTVTITDQPEPSVMMFMKSTQNFSTADPTYSIPVVRT
RNQEGSATVHWKTRNAKRFELSGPLKFSPGETEKNIVIDPRPHPGPVKPEIFQLELFDPS
TNAAVGERKTTMVTITDGALPEIAQKQQQGKDFINRTAMSPGGRLFSPTNVKAKATGPRN
IRLNWDPLGSPLGYKVKYWIYGDPETDGQVIDVKTTHAELTNLYPFCDYEMKVCGYNALG
NGNYSDMVPCQTLEDVPSEPGRLAFNVISPTVTQVSWAEPAETNGVITNYEVLYTPINDN
TKPMGVAKKVKIDNPKKRMLLIENLQSAQTYCYKVRAKNSVGWGPFREATINLASQPVRP
MSIPIIPDIPIVDAEAGDEYDGYLMYSSEVLRSPTGSKRPSVSDEDQINGRWEQNFLFPG
GNNSMSRSANMSSSSYSQLSPMSTLSSNHRGGAGGSMTTESSTTYLSGQGGNSLSRTQVI
GGGTRTENVVMRKRSENRGYYEYDDNIRDSIVIGDLSSGLSGYTEGKSTYGFSPTQTQYS
YSMSQVLRGRTQSEDVNDALLNLDRVLQDSRLASGVPDTPTRLVFSALGPTALKVSWQEP
HCDRDVLGYCVLYQLLNGGDMKRIDVSSPAENSVVVQDLLPNHSYLFKVKAQSLEGWGPE
REGVITIESAVNPNSPLSPMPGSPFTLSTPSAPGPLVFTALSPEALQLSWDKPRKPNGDI
LGYVVTCEQLHGGGDMRSFQVSGNNAETSLTVPDLSENMPYKFKVQARTTQGFGPEREGI
ITIESQDGGSTSQIGGIGGMSQLGGLGGMSQLGGLGGMSQIQGLGGMSQLGGLGGMSQIE
GLGGMSQIEGLGGMSQIEGLGGMSQYSSQSLTKRDVFQLPTEVSTHSNVTHTMINDPYFS
GDGMMMTSQHTETSGMVTRHVTKEVVQRSMQVAGSSSVTKKVERSFYEA
NT seq
6090 nt
NT seq
+upstream
nt +downstream
nt
atgagggagatggggagatggacattaaatctcttggtgggggttgtacttcttgctgtc
ctcacagccagttgctacgctgaaaaagtgaatcactgtctggctacgagggctagcacc
tgttcagaatgtattcagtcagggaagggctgtgcctactgtccagatgagatctttgat
ggtccccgctgcgaccttcatgacaacatcataagccgtggctgtaatagcgcggtgaca
gccaaaagcagcatgtcgatggaaagaaacgagcagatcgacatgctgttgaagcagtcc
caggtagctcctcaggagatgtctatgactctgctgccaggggaggagagggagatcgag
atggaggtgtttgaaccagctaaaggacctctggacctctacattcttatggacttctcc
aactccatggaggacgacctggacaacctcaagagaatgggtgctgagctggctgcgttg
gtagggaagctgtctgatgattacaccatcggtttcggcaagtttgtggacaaagtggtg
gagcctcagacagacatgagaccatccaaacttgccaagccttggcccaacagcgaccct
cccttctcgttccgtcatgtgatcactttgacccctgacctgcggtccttcaccgagaag
ctgcagaaggagaggatctcagggaacctggacgctccagaggggggcttcgacgccata
ctgcaggctgcagtctgcggggaaaagatcggctggcgtagccatgccacccacctcctg
gtcttctccaccgagtcggccttccactacgaggcggacggtgccaacgtgctggcgggc
atcatgccacgcaacgacgagcagtgccacctggaccccgaggggaaatacacagaggac
accaggcaggactacccctctgtgcccaccctggtccgcctgctgggcaaacacaacatt
atccccatcttcgccatcacaaaccactcctttacctattatcagaagctttatgagtat
ttccccatcgctgagttgggtctgctacaggaagactctgctaacatcctcaatatcctg
gagaaagcctttgagaatatccgctctaagatcagcatccgtgctgaggacaggcctaaa
gctatagaagctcaggtcctatcgtacagtggcagtgttgcgcaggctggaaccttcaaa
gtcaagcctggacaaatagggaagtttaaggtgcgtgtcaaggccagtgagatggttggg
gagcaacatgtgtgcagtctggagcagggtgacaaaaaggggaagatgagagtcaaaccg
acaaccttcagcacagccctgaacatcaacgccgaagtgctctgtcaaacctgcgactgt
gagaagacccccactaaaaatgcagtgcggtgtacaggccacggggacctggtctgtggg
aagtgccggtgctacagtggctggctgggtccgttctgtaactgctcaaccagtgcgtcg
ccggtcgcaggtagttcctgtctgggtcctgacgcgggggagccgtgttctggccgagga
gattgcctgtgtggaacgtgtgtgtgctacaacaccgaccagtacgaggggcccctctgt
cagtttgacaagtcccagtgtcaacgatacggaggcttcctctgcaacgaccgtggtcgt
tgcttcatgggtcagtgtgcgtgtgcagagggctgggagggaccggcctgtgagtgtccc
atgagcaaccagacctgtctggacactaaagggggtgtctgtaacgggcgtggtgtgtgt
aagtgcggtcgctgtgagtgccaggactctggcctggccatgacccccacctgcgaggct
aacttccaggcccagctggggatgtgtgaggacaagaggagctgtgtccagtgtcaggcc
tggaagaccggagagaagaaggacagcgaccagtgtgaccagtgccagttcaaagtggtc
atggtggacgagctcaaggaaaataaagaggtgattgaggcgtgtagtttccgtgacgag
gatgacgattgtacgtaccactacaccgtggactaccctgaggagcagactgacaaggaa
ctggaagtccaggtgcttaaaaagaaagactgtccccctgctggcttcctgtggctgatc
cctctcatcatgttcctcatgctactactgggtctactgctgctctgctgctggaagtac
tgcgcctgctgcaaggcatgtcttgctctgctgccatgctgtggaagaggccgtatggtt
ggctttaaggaggaccagtacatgctccgccaatccctgctcacctctgaccacctggac
acgcccctagtgaggaccggcccgcccaagagcaccgacgtggttcgctggaagatcacc
gacaatgtgcaccgatcgcccaatcacccgctggcgcaggtccagcccaaccccaaagag
accatccagttccctctgtccctgcgtctgaacaggttgttcacagaaggtctgtctcac
cccgacgccagagacacggagacgctgcgcagggaggttgatgacaacctgaatgaagtg
tacaagcatgttcctggagcccagagggttcagaataccaaatttagattacagaggaat
gctggtaaaagaaaagaccacacaattgtagacacagtcgtgtccgctcctcgctccagc
taccccgacatcgtcaaattgactgagaaaaacgtccagtctggaaacttccaagatctc
aaagtggtgccgggctactacacagtggccacagacagagaggcggctggtgccgtggag
ttccaggagggggtggagacggtggatgtgcgcgtgccgctcttcatcaaggaagatgac
gatgataagaagcagctgcaggtggaggcggtggacgttcctctgggcatcgctgagata
gggaaacgcttcgtcaacatcaccatcatcaaagaacacgccaagagtattatgtcgttc
ctgcagccttcctacacctacagccgacaggacagagtggctaacatccccattagcaga
gagatcatagaggacggacacacacaggtcacctaccgcacccgagacctcaccgccaag
gacaagaaggactatgtgacagtggatggggaactatcctacgggccaggggagacccag
cagactgtccctgtgcgcctattggagctgggagagggagacggtctgctgaaggacaca
caggtcaaacaatttgtcatggacctcagtaacccaagacagggagccaagctgggacgc
taccccagaaccacggtcaccatcactgaccaaccagagcccagtgtgatgatgtttatg
aagagcacccagaacttctccacagctgacccaacctactccatccccgtggtccgcaca
cgcaaccaggaggggtccgccaccgtccactggaagacccgcaatgccaagcgcttcgag
ctgtccggtcccctcaagttttctcccggggagactgagaagaacatcgtgatcgaccca
cgccctcaccctggaccggtcaaaccagaaatcttccagctggagttgtttgaccccagt
acgaacgccgcggtcggggagaggaagacgacaatggtcacgattactgatggagcatta
ccagagattgcccagaagcagcagcagggtaaggacttcatcaaccggacagccatgtct
cctggtggtcgtctcttctctcccaccaacgtcaaggctaaagccactggcccacgaaac
atccgtctcaactgggaccccttaggaagccccctgggctacaaggtgaagtattggatc
tatggggaccctgagactgatggccaggtgatagatgtgaagaccacccacgctgagctg
accaacctgtaccccttctgtgactacgagatgaaggtgtgtggctacaacgccctggga
aacggaaactacagcgacatggtgccctgtcagaccctggaggacgtccccagtgagccc
ggtcgtcttgcgttcaacgtcatcagtccaactgtcactcaggtcagctgggcggagcct
gccgagaccaacggtgtcatcaccaactacgaggtcctctacacacccatcaatgacaac
acaaagccgatgggtgtagctaagaaggttaagatagacaaccctaagaagaggatgttg
ctaattgagaacctgcagtcggcccagacctactgctataaggtccgggctaagaacagc
gttggctggggtccattcagagaggcaaccatcaacctggcctcacagcccgtcagaccc
atgtccatccctatcatcccagacatcccaatagtggacgcggaggcgggggatgagtac
gacggctacctgatgtacagcagcgaggtcttgaggtcgccaacaggctccaagagaccc
agcgtctcagacgaagaccaaattaacggcaggtgggaacaaaacttcctgttccccggg
ggaaataattccatgtcgcgcagtgccaatatgtcgtcttccagctatagccagctgtct
cccatgtccaccctcagctccaaccacagaggaggggccggaggttccatgactacggag
tcctccacaacatacctctctggacaaggagggaactcgctctcccgcactcaggtgatc
gggggcgggacgcgcacagagaatgttgtcatgaggaagcggtcagagaaccgaggttac
tatgagtatgacgacaacatccgagattccatcgtcataggagacctgtccagtggattg
tcgggatacacagaaggcaaaagtacttatggcttcagccccactcagacacagtacagc
tacagtatgtctcaggtcttgcggggcaggacccagtctgaggatgtcaacgatgcgcta
ctgaatctggacagggtgctccaggactctcgtttggcctctggggtccctgacaccccc
accaggttggtgttctctgccctgggccccacggccctgaaggtcagctggcaggagccc
cactgtgacagggatgtgctggggtactgtgttctctaccagctactcaatggaggtgat
atgaagcgtatagacgtgtccagcccagcagagaactctgtggtggtgcaggacctgctg
cctaaccactcctacctgttcaaggtgaaggctcagagtctggagggctggggaccagag
agggagggagtcatcaccatagagtcagctgtcaaccccaacagcccactcagtccaatg
ccaggttctcccttcactctcagcacccccagtgctccaggccccctggtattcacagct
ctgtcccccgaggcactgcagctgagctgggacaaaccccgcaaacccaacggagatatc
ctgggctacgtggtcacctgtgaacagctgcacggaggaggtgacatgcgttccttccag
gtgagcggtaacaacgctgagaccagtctgacggttccggacctgagtgagaacatgcca
tacaagttcaaagttcaggccaggacgacgcagggcttcgggcccgagagggagggtatc
atcaccatcgagtctcaggatgggggtagcacatctcaaataggtggaataggtggtatg
tctcaactaggagggctaggtggtatgtctcaactaggaggcctaggtggtatgtcccaa
atacaaggcctaggaggtatgtctcaactaggaggcctaggtggtatgtcccaaatagaa
ggcctaggaggtatgtcccaaatagaaggcctaggaggtatgtcccaaatagaaggccta
ggaggtatgtctcagtacagcagtcagtccttgaccaagagagatgtgttccaactgccg
acagaggtcagcacccacagcaacgtcacacacaccatgatcaacgacccctacttctca
ggggacggtatgatgatgacttcccagcacacagagaccagcggcatggtaacccgtcat
gtgactaaggaggtggtccagaggagcatgcaggtggccggctccagcagcgtcaccaag
aaggtcgagaggtcgttctatgaggcttga
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integrated database retrieval system
