Oreochromis niloticus (Nile tilapia): 100695719
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Entry
100695719 CDS
T06104
Name
(RefSeq) LOW QUALITY PROTEIN: ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100695719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100695719
03009 Ribosome biogenesis [BR:
onl03009
]
100695719
03036 Chromosome and associated proteins [BR:
onl03036
]
100695719
Enzymes [BR:
onl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
100695719
Messenger RNA biogenesis [BR:
onl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
100695719
Ribosome biogenesis [BR:
onl03009
]
Eukaryotic type
90S particles
RNase
100695719
Prokaryotic type
rRNA processing factors
100695719
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
100695719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
Motif
Other DBs
NCBI-GeneID:
100695719
NCBI-ProteinID:
XP_019218542
Ensembl:
ENSONIG00000006578
LinkDB
All DBs
Position
LG9:9528475..9658243
Genome browser
AA seq
1347 aa
AA seq
DB search
MSFHQDRGGPRGGVPPGQHGTNQNYRPTNIRPPPPQPPVPSYRYDSQTAPYMPPHPDFMQ
YPPPVQSQTSNSLNQCPVRPPFSKPPTRQGFPEPPPNFPPPPLPGSAGGPSPRAQVSAQN
AYHPYMMPPVPPPPLPHPQXASPMASQSMNYHAPYSMNYPHPPHPPFPPPTFSSSYTQSN
TQFQADHSIRHGGQYKYEKPMDSRRSPERGYRHDDHRQKCFGYGGHGDRHKMEFPGERKD
RGRSPDRRSRQEGGRYRSEYDRGRTPPRHRSRDRSRERYRHRDSRRSQSPDRHRKRPRSR
STSRDRKRGRWEEERDRRSESSSGLSRERSFSAIRSRDSDEAFSDRDRERERERERERDR
EREKVKEKGDDEKEEEDLLKPAWIRCTHAENYYSNDPMDQVGDSTVVGTSKLRDLYERFE
EELGNRQERAKAARPKWEPPKTKLDEDPDDSSSDSDCESEGEGSTCSSSSDSEVFDVIAE
IKRKKAHPDRLHEELWYNDPGEMNDGPLCKCSAKARRTGIRHSIYPGEEPVKRCRPMNNN
AGKLFHYRITVSPPTNFLTDRPTVIEYDDHEYLFEGFSLFSHTPLTNIPLCRVIRFNIDY
TIHFIEEMAPENYCVRGLELFASYLFRDILELYDWNLTDPESDGEVSGCPRFHFMPRFVR
FLPDGGKEVLSMHQVLLYLLRSSKPLVPEEEIADMLQWEELAWQKYAEECKGMIVTNPGM
KPSSVRIDQLDREQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANS
PKVRQIDKQKMTQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLT
HHIRYHQCLMHLDKLIAYVFKERCLLQLALTHPSHHLNFGMNPDHARNSLSNCGIRQPKY
GDRKVHHMYMRKKGINTLINIMSRLGQDDPSPSRINHNERLEFLGDAVVEFLTSVHLYYL
FPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEAL
MGAVYLEGGLEEARQLFGRLLFNSEDLREVWLNYPPHPLQVQEPQTDRQLIETSPVLQKL
TQFEESIGVLFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFP
DHHEGHLTLLRSSLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLESFIAA
LYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTL
QTVGPSHARIYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERK
YRQELKEMRRERERQEKETEDSEEYRK
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccatcaggatcgtgggggtccccggggaggagtgcctcctggccagcatggt
accaaccagaactacagacccaccaacataaggccgccccctccccagcctccagttcct
tcctaccgttacgattcgcagactgccccctacatgcctccacaccctgacttcatgcag
tatcctcctccagttcaatcccaaacttccaattctcttaaccagtgcccagtgcgccca
cctttctcgaagccccccacccgacaaggcttccctgaaccaccacctaactttccacct
cctcccttacccggctccgcaggtggtccctctccaagggcacaggtatctgctcaaaat
gcctaccacccttacatgatgcctcctgtgcccccaccgccgctaccacacccccaannt
gcctcccccatggcctctcaatcaatgaactaccacgctccgtactccatgaactacccc
catcctcctcaccctccattccctcctcctaccttcagctccagctacacccaaagcaac
acccagtttcaagcagaccacagcatcaggcacggggggcagtacaagtacgagaagccc
atggacagcaggaggtccccagaaagagggtatcggcacgatgatcacaggcagaagtgc
tttggctatggaggccacggcgacaggcacaaaatggaatttcctggagagaggaaggac
cgcgggagaagtccagacaggcgcagcaggcaagagggtgggcggtataggtctgaatac
gacagaggccggactccccccagacacaggagcagggatcgcagcagagagcggtatcgg
cacagagacagtcggagatcccagtcacccgacaggcacagaaagaggcctcgaagccgg
tcaacgagcagagacaggaaacgtggtcgctgggaggaggagagagacaggaggtcagag
agctcctcggggctgagcagagagcgcagcttctccgccataaggagcagagactctgat
gaagccttcagcgacagagaccgagagcgggagagggagagagagagggaacgggacagg
gagcgagaaaaagtgaaggagaagggcgatgacgagaaagaagaggaagacctgctgaaa
cccgcctggattcggtgcacccacgccgagaactactattccaatgaccccatggaccaa
gtgggagactctacagtggtgggaacgagtaaactgcgtgatctgtatgagcgctttgag
gaagagctgggaaacagacaggagcgagccaaggctgctcgacccaagtgggagccgccc
aagaccaaactggacgaggacccagatgacagcagcagcgactcagactgtgagtcagaa
ggcgaaggaagcacctgctccagcagctctgactcagaggtttttgatgtcatcgctgag
atcaaaaggaagaaagctcaccccgaccggctgcacgaggagctgtggtacaatgacccc
ggggagatgaatgatggtcccctgtgtaagtgcagtgccaaggccagacgtacagggatc
cgccacagcatctacccgggggaagagcctgtgaaacggtgccgtccaatgaacaacaac
gctggcaaactgttccactacaggatcactgtgtcacctcccaccaacttcctgaccgac
aggccgacagtgattgagtacgatgaccacgagtacctgtttgaaggcttctctctcttc
tcccacactcctctcactaacattccattgtgccgtgtgatccgcttcaacatagattac
accattcacttcatagaggagatggcaccggagaactactgcgtccgaggcctggagctg
tttgcctcctacctgttccgggatattcttgagctttatgactggaacctgacagatccc
gagtctgatggtgaggtctctggatgcccgcgtttccatttcatgccacgttttgtcaga
tttctgcccgatggcgggaaggaggtcctgtcaatgcatcaggtgctgctctacctacta
cgcagcagcaagcccctggtccccgaggaggagattgcagatatgctgcagtgggaggag
ctggcgtggcagaagtacgccgaggagtgcaagggcatgatcgtcaccaacccgggcatg
aaaccgagctcggtgcgcatcgaccaactggacagggagcagttcaacccagacgtcatc
actttccccatcatcgttcattttgggatacggcccgcgcagttaagctacgctggagac
ccccagtatcagaagctgtggaagagctacgtgaaactacgccacctgctggccaacagc
cccaaggtcaggcagatcgacaagcagaagatgacacagagagaggaagctcttcagaag
atccgtcagaagaacacgatgcgccgagaggtgacagtggagctcagcagtcagggcttc
tggaagactggcatccgctccgacgtctgtcagcacgccatgatgctccccgttctcacc
catcatatccgctaccaccagtgtctcatgcatctggataagctcatcgcctatgtcttc
aaggagcgctgcctccttcagctggccttaactcaccccagccatcacctcaactttggc
atgaatcccgaccacgcccgcaactcgctgtccaactgcggcatccgccagcccaaatat
ggcgacaggaaggtccaccacatgtacatgaggaaaaaaggaatcaacacattgattaac
atcatgtctcgtctgggacaggatgacccctccccttccaggatcaatcacaacgagaga
ctggagttcctcggtgatgctgttgtcgagttcctcaccagtgttcacctgtactacctt
tttcccagtttagaggagggtggcctggccacctacagaacggccatcgtacagaaccag
catttggccatgctagccaagaaactggagctggatcgcttcatgctctacgctcacgga
ccggatctgtgccgggagtcggacttgcggcacgccatggccaactgctttgaggctctg
atgggggctgtgtatttggaaggaggcttggaagaggcacggcagctctttgggagactg
cttttcaactctgaggatctgcgggaggtctggctcaactacccaccacaccccctgcag
gtacaggagccgcagacagacaggcagctgattgagacgtcgccggtcctccaaaaactg
acccaattcgaggagtccatcggagttttgttcacacatgtgcgtctgctggccagagcc
ttcaccttaaggaccgtgggctttaaccacctcaccctgggccacaaccagaggatggag
ttcctgggagactctatcatgcagctggtagccacagaatatctcttcatccactttcct
gaccaccatgaaggacatttaacactcctccgcagctccctggtaaacaaccgcacgcag
gccaaagtggccgaggagctgggaatgcaggagttcgccatcaccaacgacaaaaccaaa
cgtccagtcgcgctgcggaccaagactctggccgacttgttggagtctttcatcgcagct
ctctacattgataaagacctggagtacgtgcacaccttcatgaacgtctgctttttccct
cgactgaaggagttcattctgaaccaggactggaacgaccccaagtctcagctgcagcag
tgttgtttgaccctgagaacggagggcaaggagcctgatatcccactctacaagaccttg
cagacggtggggccgtcgcacgcgcgcatttacaccgtcgccgtgtatttcaaaggagag
cgaatcggctgtggcaaaggcccaagcatccaacaggcagaaatgggagctgcgatggat
gcgctcgaaaaatataacttcccacagatggctcatcagaagcgcttcatcgagcggaaa
tacaggcaggagctgaaggagatgagacgagagcgggagcggcaggagaaggaaaccgaa
gactcggaagagtacaggaagtga
DBGET
integrated database retrieval system
