Oreochromis niloticus (Nile tilapia): 100699077
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Entry
100699077 CDS
T06104
Symbol
amfr
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04137
Mitophagy - animal
onl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100699077 (amfr)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100699077 (amfr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
100699077 (amfr)
Enzymes [BR:
onl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
100699077 (amfr)
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100699077 (amfr)
Multi subunit Ring-finger type E3
ERAD complex
100699077 (amfr)
LMBR1L-GP78-UBAC2 complex
100699077 (amfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-RING_16
zf-RING_5
zf-ANAPC11
Prok-RING_4
zf-C3HC4_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
100699077
NCBI-ProteinID:
XP_013126768
Ensembl:
ENSONIG00000002462
LinkDB
All DBs
Position
LG1:complement(27571993..27582466)
Genome browser
AA seq
619 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTALSVALLAGSIFSAYTTVTDPGFGALETDEAQPPSEVERELL
KNDISNTELATTVLWYLVTDSLFVWVLVNTFCCSLMLIAKMIQYVVFGPLRVSEKQHLKD
KFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSALVFLHLMVQLCKDRFEYLSFSPSTPM
NSHVRVLCLLVSLLLDCCGLAVVCGLLGASHGMHTLSFMAAECLLVTVRTGHVIMRYSIH
LWDLNHPGTWESKGTYVYYTDFIMELAMLFLDLMHHIHMLLFGNIWLSMASLVIFMQLRY
LFHEVQRRVRRHKNYLRVINNMETRFAVATAEELAANDDDCAICWDAMLTARKLPCGHLF
HNSCLRSWLEQDTSCPTCRKSLNISGDGGQARSPQQGGGLEDNIGPVGAPPDARPHINQH
NHFFHFDGSRIASWLPSFSVEVMHTTNILGIAQANNSQLMAMAHQIQEMFPQVPSYLVLQ
DLQLTRSVEVTTDNILEGRIQVPFPTQAIERAPLQVNPAPDEQPGSSGAAEQGESDNLEV
RGGRFSKSAEERQKMLKQRKEEMLQQARRKYLNKNSEDQDEDLPGLEEDVPELDSTVLRR
RTMAAAAERRLQNLQDPAP
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgctgtttttggagaggtttccttggcccagcctgcagacctacacagcactg
agtgtggctttgcttgctggtagcatcttcagtgcctacaccacagtaactgacccggga
tttggggccttggaaacggatgaggcacagcctccctccgaggtggagcgtgaacttcta
aagaatgatattagtaatacagaactggcaacaactgtcctgtggtatcttgtcacagac
agtctctttgtgtgggtgttagtgaacacattctgctgctcgttgatgttaattgctaaa
atgattcagtacgtggtgtttggcccactcagagtcagtgagaagcagcacctgaaagat
aaattctggaacttcattttctacaagttcatcttcatttttggtgtactgaacgtccag
acagtggaggaggtggtcatgtggtgtctgtggttctccgcactcgtttttctccaccta
atggttcagctctgcaaggatcgctttgaatatctgtctttctccccatccacacctatg
aacagccatgtgcgagtgctctgtctgctggtctccctgcttctggactgttgtggcctg
gctgtggtctgcggcctcctgggagcttctcatggcatgcacacgctctccttcatggca
gcagagtgtctgctggtgactgtgcgcactggacatgtcatcatgcgatactcaattcat
ctctgggatttgaaccatccagggacttgggagagtaaggggacatatgtctactacaca
gacttcataatggagctggccatgctgtttcttgacctaatgcaccatatccatatgctg
cttttcgggaatatctggctgtccatggcaagcttggttatcttcatgcagctgcgatat
cttttccatgaggtgcagcgccgtgtccgccgacataagaactatctgcgtgtcattaat
aacatggagacaagatttgctgttgctactgcagaggagctggcagccaatgatgatgat
tgtgccatttgctgggatgccatgcttacagcacgcaaactgccctgcggtcatctcttc
cacaactcttgtttgcgctcgtggcttgagcaggacacgtcgtgtcccacatgtcggaaa
tccctgaatattagtggggatgggggccaagcaagaagcccgcagcagggtgggggtttg
gaggacaacattggcccagttggagctcccccagatgccagaccacatatcaaccaacac
aatcacttcttccactttgatggatctcgtatcgccagctggctgcccagtttctcagta
gaagtaatgcatactactaacatcttgggcattgctcaagcaaataactcccagcttatg
gctatggctcatcagattcaagagatgtttcctcaggtgccctcctacctggtactgcaa
gacttacagttgacccgctctgtggaagttactactgacaacatcctggagggacgtatc
caggtgcctttccctacgcaggccatagagcgagcccctttacaggttaatcctgcacca
gatgagcagcctgggtccagtggagcagctgagcagggtgaatctgacaacttggaggtt
agaggaggccgcttctctaagtctgcagaggagaggcagaagatgttaaagcagaggaaa
gaagagatgcttcagcaagcacgcaggaagtatctgaacaaaaattcggaggatcaggat
gaagatttgcctggactggaggaggatgtcccagaattggactcaactgtgctgagacgc
agaaccatggcagcagctgcagagagacgtctacaaaacctacaggaccctgcgccctga
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