KEGG   Oreochromis niloticus (Nile tilapia): 100699077
Entry
100699077         CDS       T06104                                 
Symbol
amfr
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl04137  Mitophagy - animal
onl04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100699077 (amfr)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    100699077 (amfr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:onl04121]
    100699077 (amfr)
Enzymes [BR:onl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     100699077 (amfr)
Ubiquitin system [BR:onl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100699077 (amfr)
  Multi subunit Ring-finger type E3
   ERAD complex
    100699077 (amfr)
   LMBR1L-GP78-UBAC2 complex
    100699077 (amfr)
SSDB
Motif
Pfam: G2BR zf-RING_2 CUE zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-rbx1 zf-RING_11 zf-RING_UBOX zf-RING_16 zf-RING_5 zf-ANAPC11 Prok-RING_4 zf-C3HC4_4 zf-RING-like
Other DBs
NCBI-GeneID: 100699077
NCBI-ProteinID: XP_013126768
Ensembl: ENSONIG00000002462
LinkDB
Position
LG1:complement(27571993..27582466)
AA seq 619 aa
MPLLFLERFPWPSLQTYTALSVALLAGSIFSAYTTVTDPGFGALETDEAQPPSEVERELL
KNDISNTELATTVLWYLVTDSLFVWVLVNTFCCSLMLIAKMIQYVVFGPLRVSEKQHLKD
KFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSALVFLHLMVQLCKDRFEYLSFSPSTPM
NSHVRVLCLLVSLLLDCCGLAVVCGLLGASHGMHTLSFMAAECLLVTVRTGHVIMRYSIH
LWDLNHPGTWESKGTYVYYTDFIMELAMLFLDLMHHIHMLLFGNIWLSMASLVIFMQLRY
LFHEVQRRVRRHKNYLRVINNMETRFAVATAEELAANDDDCAICWDAMLTARKLPCGHLF
HNSCLRSWLEQDTSCPTCRKSLNISGDGGQARSPQQGGGLEDNIGPVGAPPDARPHINQH
NHFFHFDGSRIASWLPSFSVEVMHTTNILGIAQANNSQLMAMAHQIQEMFPQVPSYLVLQ
DLQLTRSVEVTTDNILEGRIQVPFPTQAIERAPLQVNPAPDEQPGSSGAAEQGESDNLEV
RGGRFSKSAEERQKMLKQRKEEMLQQARRKYLNKNSEDQDEDLPGLEEDVPELDSTVLRR
RTMAAAAERRLQNLQDPAP
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgcctctgctgtttttggagaggtttccttggcccagcctgcagacctacacagcactg
agtgtggctttgcttgctggtagcatcttcagtgcctacaccacagtaactgacccggga
tttggggccttggaaacggatgaggcacagcctccctccgaggtggagcgtgaacttcta
aagaatgatattagtaatacagaactggcaacaactgtcctgtggtatcttgtcacagac
agtctctttgtgtgggtgttagtgaacacattctgctgctcgttgatgttaattgctaaa
atgattcagtacgtggtgtttggcccactcagagtcagtgagaagcagcacctgaaagat
aaattctggaacttcattttctacaagttcatcttcatttttggtgtactgaacgtccag
acagtggaggaggtggtcatgtggtgtctgtggttctccgcactcgtttttctccaccta
atggttcagctctgcaaggatcgctttgaatatctgtctttctccccatccacacctatg
aacagccatgtgcgagtgctctgtctgctggtctccctgcttctggactgttgtggcctg
gctgtggtctgcggcctcctgggagcttctcatggcatgcacacgctctccttcatggca
gcagagtgtctgctggtgactgtgcgcactggacatgtcatcatgcgatactcaattcat
ctctgggatttgaaccatccagggacttgggagagtaaggggacatatgtctactacaca
gacttcataatggagctggccatgctgtttcttgacctaatgcaccatatccatatgctg
cttttcgggaatatctggctgtccatggcaagcttggttatcttcatgcagctgcgatat
cttttccatgaggtgcagcgccgtgtccgccgacataagaactatctgcgtgtcattaat
aacatggagacaagatttgctgttgctactgcagaggagctggcagccaatgatgatgat
tgtgccatttgctgggatgccatgcttacagcacgcaaactgccctgcggtcatctcttc
cacaactcttgtttgcgctcgtggcttgagcaggacacgtcgtgtcccacatgtcggaaa
tccctgaatattagtggggatgggggccaagcaagaagcccgcagcagggtgggggtttg
gaggacaacattggcccagttggagctcccccagatgccagaccacatatcaaccaacac
aatcacttcttccactttgatggatctcgtatcgccagctggctgcccagtttctcagta
gaagtaatgcatactactaacatcttgggcattgctcaagcaaataactcccagcttatg
gctatggctcatcagattcaagagatgtttcctcaggtgccctcctacctggtactgcaa
gacttacagttgacccgctctgtggaagttactactgacaacatcctggagggacgtatc
caggtgcctttccctacgcaggccatagagcgagcccctttacaggttaatcctgcacca
gatgagcagcctgggtccagtggagcagctgagcagggtgaatctgacaacttggaggtt
agaggaggccgcttctctaagtctgcagaggagaggcagaagatgttaaagcagaggaaa
gaagagatgcttcagcaagcacgcaggaagtatctgaacaaaaattcggaggatcaggat
gaagatttgcctggactggaggaggatgtcccagaattggactcaactgtgctgagacgc
agaaccatggcagcagctgcagagagacgtctacaaaacctacaggaccctgcgccctga

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