Oceanobacillus oncorhynchi: NP440_18640
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Entry
NP440_18640 CDS
T08799
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
oon
Oceanobacillus oncorhynchi
Pathway
oon00190
Oxidative phosphorylation
oon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
NP440_18640
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NP440_18640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oon03019
]
NP440_18640
Enzymes [BR:
oon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
NP440_18640
Messenger RNA biogenesis [BR:
oon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NP440_18640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
Chordopox_E11
DUF2550
Motif
Other DBs
NCBI-ProteinID:
UUI39319
LinkDB
All DBs
Position
3798718..3800793
Genome browser
AA seq
691 aa
AA seq
DB search
MDKQIKNVNSSASYNNRELSWLSFNKRVLEEADDVSNPLLERLRFLSIFSSNLDEFFMVR
VAGLKDQVKAGFNRPDDKSNLTPKQQLSSIASLNHDLVEQQYHLFKQVQEELETQQIRLF
QMSELSAEALYILEQYFDEQIYPILTPMAIDAYRAFPMLLNKSLNLAIQLEDEYEQEQHQ
KKTAIVQVPALLDRFIQIDDAHHYVLLEDVIRFFIHKLFKGYRVISTSTFRITRNADMNI
HEDSAHDLLKEIEKELKKRKFGEAVRLEMNAMEQDPSITSFLLHELEIHEKDLYIVDGPL
DLTCLNDFYDQVKHDFEYLIYETFIPQPAQDIHEDETVLEAVRKRDLFLHHPYESFEPIV
DLMREAADDPEVLAIKQTLYRVSGDSPIIASLKRAAENGKQVTVLVELKARFDEANNVEW
AKQLEIAGCHVIYGMISLKTHSKITLIVRKHENRIERVVHLGTGNYNDQTAKFYTDMSFL
TTKRKYGIDATNFFNYLSGYTEKPDFHHLSMAPFDIRNDLIQLIDQEITFHKEYNNGRII
AKMNSLTDKPLIKKLYEASQAGVQVNLIVRGICCLRPGIPGVSENIRVLSIVGRFLEHSR
IYLFHHNGDINIFLSSADLMTRNMIKRVELMFPIFDPRIKNRIHDILDIMLRDSKKARQQ
ANDGTYSHVPPDDEALNSQLKLFEQAMDVFA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacaaataaaaaacgtcaattcatcagcctcctacaataacagggagctgagc
tggctctcatttaataaacgtgtattagaagaagcagacgatgtaagcaacccgttgctc
gaacggctgcggttcttatccatcttttcatccaacttagatgaattctttatggtccgg
gtagccggattaaaggatcaggtaaaagcaggatttaaccggccggatgacaaatcaaac
ctgactccaaagcagcagctctcttctatcgcatccttaaatcatgacttggtagagcag
cagtatcacctgtttaaacaggtacaggaggaattagaaacacagcagattcgtcttttt
caaatgtcggaattatctgcagaagcattatatatactggagcaatatttcgatgaacaa
atttatccgattcttacaccgatggccatcgatgcctatcgcgcttttccaatgctgtta
aataaatcgttaaatcttgctattcagctggaagacgagtatgaacaagaacagcatcag
aaaaaaacagcgattgtccaagtacctgcattgttagaccggtttatccagattgatgat
gcgcatcactatgtgttgttagaagatgtcattcggttttttatccataaactttttaag
ggatatcgggtaatctcaacaagcacttttcgtattacccgcaatgcagatatgaatatc
catgaggacagcgcgcatgatttattaaaggaaattgaaaaagagctgaagaagcgcaaa
tttggagaggctgtccgtttagagatgaatgccatggagcaggacccttctattacttct
ttcctgctgcatgagctggaaattcatgaaaaggatttgtacattgtagatggaccgctc
gatttaacgtgtttaaatgacttttatgatcaagtaaagcatgactttgagtatcttatt
tatgaaacatttatcccgcagccggcacaggatatccatgaggatgaaacggtattggaa
gctgtcagaaaaagagacctctttcttcatcatccatatgaatcctttgaaccgattgtt
gatttaatgcgtgaagctgcggatgatccggaagtgctggcaattaagcagacactctat
cgtgtcagcggggattcaccgattatcgccagtttaaagcgtgcagcggaaaatggaaaa
caagtaaccgttctggtggaattaaaagcacgattcgatgaggcgaataatgtagagtgg
gcaaaacagctggaaatcgccggctgtcatgttatttacggaatgatttcattgaaaacc
cacagtaaaatcacgctgattgtccgaaagcatgaaaatcggattgaacgggtcgtccac
cttggtacgggaaattataatgatcagacagctaaattttacacagacatgtctttttta
acgaccaagcgcaaatatggcatcgatgccaccaatttcttcaattatttgagcggttat
acagaaaagcctgattttcatcatttatccatggcaccatttgatattcgcaatgaccta
attcagcttatcgatcaggaaatcacgtttcacaaggaatataacaatggacggattatt
gccaaaatgaattcgctgacagataaacctttaatcaaaaagctttacgaagcttctcaa
gccggcgtgcaagtgaatttgattgtccgcggtatctgctgtctgcgcccgggcattcca
ggtgttagcgagaacattcgcgtgctgagcattgtcgggcgatttttggaacatagccgc
atctatcttttccatcataatggcgacatcaatatttttctgtcctccgcagatttgatg
acgcgaaatatgattaaacgggtagagctgatgtttccaatctttgacccccggataaaa
aatcgtattcatgatatcctcgacatcatgctccgtgactctaaaaaagcacgacagcag
gcaaatgacggcacttattcgcatgttccgccggatgatgaagctttgaatagccaatta
aaattatttgaacaggcgatggatgtatttgcttaa
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