KEGG   Orcinus orca (killer whale): 101270486
Entry
101270486         CDS       T05247                                 
Name
(RefSeq) collagen alpha-1(XIII) chain
  KO
K16617  collagen type XIII alpha
Organism
oor  Orcinus orca (killer whale)
Pathway
oor04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:oor00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    101270486
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:oor00536]
    101270486
Glycosaminoglycan binding proteins [BR:oor00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   101270486
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 101270486
NCBI-ProteinID: XP_033263472
LinkDB
Position
14:28268597..28352920
AA seq 585 aa
MPGRVGGKGQPGEKGAPGDAGMSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGRPGPKGE
TGPPGQKGEKGQCGEHPHRLLPLLNSVRLAAPPVIKRRTFQGEQGQAGIQGPPGPPGPSG
PLGPPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGTKGAPGIAVAGM
KGEPGIPGAKGEKGAAGAPGLLGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEA
GADGRAGAPGRQGDKGEPGAAGEQGPAGPKGSKGEPGKGEMVDYNGNINEALQEIRTLAL
MGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDVGPPGPQGPPGKAGP
AGLKGEDGLPGNPGEKGEKGEMGQPGPPGLDGPTGEKGEPGDQGRHGATGLPGPIGLPGF
TGEKGEPGEKGDPGVEVPGPPGPEGPPGPPGLQGIPGPKGEAGLDGAKGEKGIQGEKGDR
GPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPP
GDKGNRGHRGFKGEKGEPGLPGLDGLDAPCPLGEDGLPVQGCWNK
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgcctggacgtgtgggaggaaagggccaaccaggcgagaagggagccccaggagatgcc
gggatgtccatcatcggtccccgcggccccccgggtcagccgggcactcgaggttttcct
ggatttccgggtcccattgggcttgacggcaaaccgggccgccccggaccaaaaggggag
acgggacctccaggacaaaaaggagaaaagggtcagtgtggagagcacccacaccggctg
ctgcctctcctcaattcagtgcggctggctgcacccccagtcattaaaaggcggaccttc
cagggtgaacagggccaggccggcatccaagggccaccaggccctcctggaccaagtgga
cctctggggcccccaggactgccagggcccatggggccacccggcttacctgggcctcct
ggaccgaagggagacccggggatccagggctaccacggccggaagggagaacggggcatg
ccagggatgccgggcaaacacggaacaaagggggctcctggaatcgctgtggccgggatg
aagggtgagcctgggatcccaggagccaagggtgagaagggggctgcgggcgcccctggg
ctactcggcctcctagggcagaagggagaaaaaggtgatgccggcaactccattggagga
ggcagaggggagcctgggcccccagggctccctgggcccccagggccaaagggggaagct
ggagctgatggccgggcgggcgccccaggacggcaaggagacaagggggagcctggagca
gctggagaacagggacctgctggccccaagggctccaagggcgaacctgggaaaggagag
atggtggactacaatggaaacatcaacgaggctctccaggagatccggacactggccttg
atggggccccctggtcttcctgggcagattggcccacccggagctccagggatcccaggc
cagaagggggagattggactgcccggccctcctggacacgatggggaaaagggacctcga
ggcaaaccaggagatgtgggccctcctggtccccaaggccccccaggaaaggctgggcct
gcaggactgaagggagaagatggccttccggggaacccaggagagaagggggagaaaggg
gagatggggcagccaggcccaccgggtctagacggcccaactggggagaaaggagaacca
ggtgaccaagggagacatggagcgaccggattgcctggcccaatcgggctcccaggattc
acgggagagaaaggagaacccggggagaagggtgacccaggagtggaggttcctgggcca
ccagggccagagggacctcccggacctccggggctccaaggcattcctggaccaaagggg
gaagcagggctagatggagcaaaaggagagaagggcatccagggagaaaaaggagaccga
ggtcctctgggattacccggagcttcaggtttggacggcaggcctgggccaccgggtact
ccaggaccaattggagttccaggcccagcgggaccaaagggagagaggggcagcaaaggc
gaccctgggatgacaggaccaacgggagcagctgggcttcctggtttacacggaccaccc
ggggacaaaggaaaccggggacaccgaggttttaaaggagagaaaggggagccggggtta
ccagggctggacggattggatgccccgtgcccactgggtgaagatggcttgccagtccag
ggctgctggaataagtga

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