Orcinus orca (killer whale): 101272272
Help
Entry
101272272 CDS
T05247
Symbol
TSEN54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54 isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oor03016
]
101272272 (TSEN54)
Transfer RNA biogenesis [BR:
oor03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
101272272 (TSEN54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
101272272
NCBI-ProteinID:
XP_033294375
LinkDB
All DBs
Position
19:28670119..28677790
Genome browser
AA seq
536 aa
AA seq
DB search
MEPELESASVEVPAGRVLSAPELFAARSRSQKLPQRSHGPKDFLPDGSAAQAERLRVCRE
ELWQLLAEERVERLGSLVAAEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYL
LECGSIRLFHQDLPLSIQEAYQLLLTEDTVTFLQYQVFSHLKRLGYVLRRFQASSVLSPY
ERQLNLDGSVQRLEDRNGKRKRRSSSSQSITKKPKALENPLQGVDGTPESLATSSPPPHN
QNSRCPEEKSQESSPVKGPMGPFQLLGSLEPCPGLAREGVRCSQESGKMENGVKGACKPR
WNFEQISFPNMASDSRHTLLLAPAPELLPANVAGRETDAESWCQKLNQRKEKLSRREREQ
QAEEAQHFREDVNSDPEVQRCSSWQEYKQLLQRRHLQKTQSRPPHLWDQPVTPLLSPGQA
DSPATVLQHISVLQTTHLADGGVRRVSRLVEKSGGLEISFDVYQADAVATFRKNNPGKPY
VRVCISGFDEPVPDLCTLKRLSYQSGDVPLIFALVDHGDISFYSFRDFTLPRDLEH
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgaactcgagtcagcctcggtggaggtgcctgccgggcgcgtgctcagtgcc
ccggagctcttcgctgcccgttccaggtcccagaagctgccccagcgctcgcatggcccc
aaggacttcctccccgacggctcagcggcccaggctgagcgactgcgagtgtgccgcgag
gagctctggcagctgctggcggaggagcgcgtggagcgtctgggcagtttggtggccgcc
gagtggagaccggaagaaggcttcgtggagttgaagtctcctgcgggtaaattctggcag
actatgggcttctcagagcagggccggcagcggcttcacccggaagaggccttgtatctg
ctggagtgtggctctatccggctcttccaccaagaccttccactgtctatccaagaggcc
taccagctgctgctgactgaggacactgtgactttcctgcagtaccaggtcttcagtcac
ctgaagagactgggctatgtgcttcgacgattccaagcaagctctgtcctgtccccttac
gagaggcagctgaacttggatggcagtgtccagcgcttggaggatcggaatggcaagagg
aagaggaggagctccagctctcagtccattactaagaagcccaaggccctggagaacccc
ctgcagggggtggatgggacacccgagagcctggcgacctccagcccacctccccacaac
cagaacagccgatgcccagaggagaaatcccaggagtcaagccccgtaaagggccccatg
ggcccctttcagcttctggggtccctggagccctgccctgggctggccagggagggggtg
cggtgcagccaggagagtggcaaaatggagaacggggtcaagggggcttgcaagccacgc
tggaactttgagcagatctccttccccaacatggcttcagacagtcgccataccctcctg
cttgcccccgccccagagctgctcccggccaacgtggcagggcgggagacagacgctgag
tcctggtgccagaagctaaaccagcggaaggagaagctctccaggcgggaacgggagcaa
caggcagaggaggcccagcacttccgggaggatgtaaactcggatcccgaggtgcagcgc
tgctccagctggcaggagtacaagcagctgctgcagaggcggcacctgcagaagacccag
agccgccccccacacctgtgggaccagcctgtcacacccttgctgagtcccggtcaggca
gactccccagccacagtccttcagcatatctctgtgctgcagacgacacaccttgctgat
ggaggcgtgcggcgagtttccaggctggtggagaagtctgggggcttggagatcagcttt
gatgtttaccaggccgatgccgtggccaccttccgaaagaataaccctggcaagccctat
gtccgggtgtgcattagtggatttgatgagccagtcccagacctctgcaccctcaagcgg
ttgtcctaccagagcggggatgttcctctgatctttgccctggtggatcacggagacatc
tccttctacagcttcagggacttcacgctacccagggatctggagcactga
DBGET
integrated database retrieval system
