Orcinus orca (killer whale): 101275244
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Entry
101275244 CDS
T05247
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oor03021
]
101275244 (SUPT6H)
03036 Chromosome and associated proteins [BR:
oor03036
]
101275244 (SUPT6H)
Transcription machinery [BR:
oor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
101275244 (SUPT6H)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
101275244 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Spt6_S1
HHH_3
S1
Tex_N
HHH_9
SH2
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
101275244
NCBI-ProteinID:
XP_012387560
LinkDB
All DBs
Position
19:5039240..5070806
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMAPPEEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSISVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRVREEGDEEGDGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
DEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELIDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQVFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSAQPQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagcgaggccgaggagtcagaggaagagtacaatgatgaaggc
gaagtggtgccccgggtcaccaagaaatttgtagaagaggaggatgacgatgaggaggag
gaagaggagaacctggatgatcaggatgaacaaggaaacctgaaaggctttatcaatgac
gatgacgatgaagatgaaggggaggaggatgagggtagtgactctggtgattcagaagat
gatgttggccacaagaagagaaaacgcacatcttttgacgaccgcttggaggatgatgat
tttgatctcattgaggagaatttgggtgtcaaagtcaaaagaggacaaaaataccgacgt
gtcaaaaaaatgtcagatgatgaggacgatgacgaagaggaatatggcaaggaggaacat
gaaaaagaagctattgcagaggagatctttcaggatggggaaggggaagaagggcaggag
gccgtggaggcccccatggctcctccagaggaggaggaagaagatgatgaagagtcagac
attgatgacttcattgtggatgacgatggacaaccactgaaaaaacctaagtggcggaaa
aagcttcctggatacactgatgctgccctgcaagaagcccaggagatttttggtgtggac
tttgactatgacgaatttgagaaatataatgagtatgatgaagaactggaggaagagtat
gagtatgaggacgatgaggctgagggcgagatccgagtgcgccccaagaagaccaccaag
aaacgtgtgagccgcaggagcatcttcgagatgtatgagcccagtgagctggaaagcagc
cacctcacagatcaggacaatgaaatccgagctactgacctgcctgagaggttccagctc
cgttccatctccgtcaagggggctgaagatgatgaactggaagaagaggctgactggatc
tacaggaatgcctttgccacaccaaccatttctctgcaggaaagctgtgattacctagac
cgagggcagccaaccagcagcttcagtcgaaaaggacccagcacaattcagaagattaaa
gaggccctgggcttcatgagaaatcagcattttgaggtgcctttcattgctttctaccgg
aaggagtacgtggagcccgagttgcatatcaatgacctgtggagggtgtggcagtgggat
gaaaagtggacccagctgaggatccgtaaggagaacctaacacggctgtttgagaagatg
caggcttatcagtatgagcaaatctctgctgaccctgacaagccccttgctgatggcatc
cgggctctggacaccaccgacatggagaggctcaaggatgtacaatcaatggatgaactg
aaagatgtctacaatcatttcctgctttattatggtcgtgacatccccaagatgcagaat
gccgccaaggccagccgcaagaagctaaagcgtgtaagagaagagggagatgaggaaggt
gatggtgaggaggcagaagatgaggaacagagagggccagagctcaagcaggcttcccgc
cgagatatgtacaccatctgccagagcgctgggctagatggcttggccaaaaagtttggg
cttactcctgagcaatttggggaaaacctccgggacagttaccagaggcacgagacagag
cagtttcctgcagagcccttggagctggccaaggattatgtttgcagccagttccctaca
ccagaagctgtgctggaaggtgcccgctacatggtagccctgcagattgcccgagagccc
cttgtccggcaggtgctgaggcaaactttccaggagagagccaagctcaatataaccccc
accaagaaaggcagaaaggatgtggatgaagcccactacgcttactccttcaagtactta
aagaacaagcctgttaaggaactgagagatgaccagttcctcaagatatgcctggctgaa
gatgaagggctgctcaccattgacatcagcatagacatgaagggggtggaaggctatggc
aatgaccagacgtattttgaagaaatcaaacaattttactaccgagatgagttcagccac
caggtgcaggagtggaatcggcagcggaccatggccatcgagcgagctttgcagcagttc
ctgtacgtgcagatggccaaagagctcaagaacaagctgctggccgaagccaaagaatat
gtcataaaggcctgtagtcggaagctctacaactggttgagggtggcaccctaccggccg
gatcaacaggtagaggaagatgatgactttatggatgagaaccaagggaagggcatccga
gtcctaggcattgctttctcctctgccagagatcaccctgtgttctgcgccttggtcaac
ggtgaaggagaagtgacagacttcctccggctgcctcattttaccaaacggcgaactgca
tggagagaggaagaacgggagaagaaggctcaagacattgaaacgctaaagaaattcctc
ctgaacaaaaagcctcatgtggtgacagttgcaggagagaacagggatgcccagatgttg
attgaggatgtgaagcgcattgtgcatgagctggaccaaggtcaacagctgtcctctatt
ggggtggagctgattgacaatgaattggccattctctatatgaacagcaagaaatcagag
gcagagttccgggattaccctcctgtgctgagacaggcagtctccctggcccggcgtatc
caggaccctctgattgaatttgcccaggtttgcagctctgatgaagacattctgtgcctc
aagtttcaccccttgcaggagcatgtggtgaaagaagagctgctcaatgccttgtactgt
gaatttatcaaccgagtcaatgaggttggagttgatgtcaaccgtgccattgcccacccc
tacagccaggccttaattcagtatgtctgtggcctgggacctcgaaaagggacccatctc
ctaaagatcctgaaacagaacaacaccaggctcgagagccggacccagctggtcaccatg
tgccacatgggtcccaaagtcttcatgaattgcgctggcttcctcaagatcgacacggcc
tccctgggggacagcactgactcatatattgaagtccttgatggttcccgagttcaccct
gagacctatgagtgggccaggaagatggcagtggatgctctggaatatgatgaatcagcc
gaggatgccaaccctgcaggggcccttgaggagatcttggaaaacccagagcgactcaag
gacctggacttggatgcctttgcagaagaactggagaggcagggctatggtgacaaacac
atcactctgtatgacatccgagcagagctgagctgtcggtataaggacctccggacagcc
tatcgctctcccaacacagaggaaatcttcaatatgttaaccaaagaaacaccagagacc
ttctacattggaaagctcattatctgcaacgtcactggcatcgcccataggcgtccacag
ggtgagagctatgaccaggcaatccgcaacgatgagacagggctatggcagtgccccttc
tgtcaacaggacaatttccctgaactaagcgaggtctggaaccactttgacagtggttca
tgcccaggccaggccatcggtgtcaaaacaaggctagacaatggtgtcactggcttcatc
cccaccaaattcctcagcgacaaagtggtaaagcggccggaggaacgagtgaaggtggga
atgactgttcactgccgcatcatgaagattgacatcgagaagtttagtgcagacctgacc
tgccgcacctcagacctcatggacaggaacaacgagtggaaactgcccaaggacacctac
tatgactttgacgctgaagcagcagaccacaagcaggaagaggacatgaaacggaagcag
cagcggaccacatatatcaagcgagtgattgcacacccgtccttccataatataaatttt
aagcaagcagaaaaaatgatggagaccatggaccagggtgacgtgatcatccgaccgagc
agcaagggtgaaaatcacctgacagtgacctggaaggtcagtgacggcatataccagcac
gtggatgtgcgggaagagggcaaggaaaatgccttcagcctgggagccaccctgtggatc
aacagtgaggaatttgaagacttggatgagattgttgcccgctatgttcagcctatggca
tcctttgcccgggaccttctgaaccacaagtattatcaggactgcagtggtggggaccgt
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcattccctat
ttcatctgtgcctgcaaggaactgcccggcaagttcctactgggataccaaccccggggt
aaacccaggatagaatatgtaacagtgactccagaaggattccggtaccggggccaaatc
ttcccgactgtgaatggccttttcagatggtttaaggatcattatcaggatcctgtacca
ggcatcacccccagtagcagcagcaggacccggacacctgcctctatcaatgctacccca
gccaatatcaaccttgcagatctgacacgggctgtgaacgccctgccccagaacatgacc
tcacaggtgttcagtgccattgctgccgtgacaggacaaggccagaaccctaatgccacc
ccggcgcagtgggcctccagccagtatggctatggcggcagtggagggggcagcagcgct
taccacgtgttcccgacgccagcccagcagccggtggccacgccactaatgacccccagc
tactcctacacaaccccaagccagcccatcaccacaccacagtaccaccagctacaggcc
agcaccacccctcagtctgcccagccccagccccagccctcctccagctcccggcaacgg
cagcagcagccaaagtccaacagccatgcagccatcgactgggggaagatggcggaacag
tggctgcaggagaaggaggcagaacggcggaaacagaagcagcggctgacacctcggccc
tcccccagccctatgatcgaaagcacccccatgtctattgctggcgacgccaccccactc
ctggacgagatggatcggtag
DBGET
integrated database retrieval system
