Orcinus orca (killer whale): 101275475
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Entry
101275475 CDS
T05247
Gene name
FN1
Definition
(RefSeq) fibronectin isoform X1
KO
K05717
fibronectin 1
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04151
PI3K-Akt signaling pathway
oor04510
Focal adhesion
oor04512
ECM-receptor interaction
oor04810
Regulation of actin cytoskeleton
oor04933
AGE-RAGE signaling pathway in diabetic complications
oor05100
Bacterial invasion of epithelial cells
oor05135
Yersinia infection
oor05146
Amoebiasis
oor05165
Human papillomavirus infection
oor05200
Pathways in cancer
oor05205
Proteoglycans in cancer
oor05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101275475 (FN1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101275475 (FN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101275475 (FN1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
101275475 (FN1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101275475 (FN1)
05205 Proteoglycans in cancer
101275475 (FN1)
09162 Cancer: specific types
05222 Small cell lung cancer
101275475 (FN1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101275475 (FN1)
09171 Infectious disease: bacterial
05135 Yersinia infection
101275475 (FN1)
05100 Bacterial invasion of epithelial cells
101275475 (FN1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101275475 (FN1)
09174 Infectious disease: parasitic
05146 Amoebiasis
101275475 (FN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oor04131
]
101275475 (FN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oor04147
]
101275475 (FN1)
00536 Glycosaminoglycan binding proteins [BR:
oor00536
]
101275475 (FN1)
04990 Domain-containing proteins not elsewhere classified [BR:
oor04990
]
101275475 (FN1)
Membrane trafficking [BR:
oor04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
101275475 (FN1)
Exosome [BR:
oor04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
101275475 (FN1)
Glycosaminoglycan binding proteins [BR:
oor00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101275475 (FN1)
Domain-containing proteins not elsewhere classified [BR:
oor04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
101275475 (FN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
fn2
DUF2369
DUF1410
Motif
Other DBs
NCBI-GeneID:
101275475
NCBI-ProteinID:
XP_004262794
LinkDB
All DBs
Position
Unknown
AA seq
2478 aa
AA seq
DB search
MLGDPGPRLLLLLTVLFLGTAVPSTGASKSKRQAQQVVQPQSPLAVSQSKPGCYDNGKHY
QINQQWERTYLGSALVCTCYGGSRGFNCESKPEPEETCFDKYTGNTYRVGDTYERPKDSM
IWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWTC
KPIAEKCFDHAAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQDTRTS
YRIGDTWRKKDNRGNLLQCICTGNGRGEWKCERHTTLQTTSAGSGSFTDVRTAIYQPQPH
PQPAPYGHCVTDSGVVYSVGMQWLKAQGNKQMLCTCLGNGVSCQETAITQTYGGNSNGEP
CVLPFTYNGRTFYSCTTEGRQDGHLWCSTTSNYEQDQKYSFCTDHTVLVQTRGGNSNGAL
CHFPFLYNNQNYTDCTSEGRRDNMKWCGTTRNYDADQKFGFCPMAAHEEICTTNEGIMYR
IGDQWDKQHDMGHMMRCTCVGNGRGEWTCVAYSQLRDQCIVDDITYNVNDTFHKRHEEGH
MLNCTCFGQGRGRWKCDPIDQCQDSESRTFYQIGESWEKFLHGVRYQCYCYGRGIGEWGC
QPIQTYPGSTGPVQVIITETPSQPNSHPIQWNAPEPSHISKYILRWKPKNSPDRWKEATI
PGHLNSYTIKGLRPGVVYEGQLISVQHYGQREMTRFDFTTTSTSPVVTSNTVTGETTPFS
PVVATSESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPD
LLPGRKYIVNVYQISEEGEQSLILSTSQTTAPDAPPDPTVDQVDDTSIVVRWSRPQAPIT
GYRIVYSPSVEGSSTELNLPETANSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETT
GVPRSDKVPPPRDLQFVEVTDVKITIMWTPPESAVTGYRVDVIPVNLPGEHGQRLPTSRN
TFAEVTGLSPGVTYHFKVFAVNHGRESKPLTAQQATKLDAPTNLQFINETDTTIIVTWTP
PRARIAGYRLTVGLTRGGQPKQYNVGPSSTQYPLRNLQPGSEYSATLVAVKGSQQSPRAT
GVFTTLQPLGSIPPYHTEVTETTIVITWTPAPRIGFKLGVRPSQGGEAPREVTSESGSIV
VSGLTPGVEYIYTISVLKDGQERDTPIVKKVVTPLSPPKNLHLETNPDTGVLTVSWERSS
TPDITGYRITTTPTNGQQGYSLEEVVHADQSSCTFENLSPGLEYNVSVYTVKDDKESVPI
SDTIMPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFVDSS
VGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNVGPDTMRVTWA
PPPSIELTNLLVRYSPVKNEEDVAELSVSPSDNAVFLTNLLPGTEYLVSVSSVYEQHESV
PLRGRQKTGLDSPTGIDFSDITANSFTVHWIAPRATITGYKIRHHPEHMSGRPREDRVPP
SRNSITLTNLNPGTDYVVSIVALNGKEESPSLVGQQTTVSDVPRDLEVIAATPTSLLISW
DAPAVTVRYYRITYGETGGSSPVQEFTVPGSKSTATISGLKPGADYTITVYAVTGRGDSP
ASSKPISIDYRTEIDKPSQMQVTDVQDNSISVRWLPSSSPVTGYRVTTTPKNGPGPSKTM
TAGPDQTEMTIEGLQPTVEYVVSVYAQNRNGESQPLVQTAVTNIDRPKGLAFTDVDVDSI
KIAWESPQGQVSRYRVTYSSPEDGIHELFPAPDGEEETAELQGLRPGSEYTVSVVALHDD
MESQPLIGTQSTAIPAPTNLKFTQVSPTSLAAQWTAPNVQLTGYRVRVTPKEKTGPMKEI
NLAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDATET
TITISWRTKTETITGFQVDAIPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIHLYTLND
NARSSPVVIDASTAIDAPSNLHFLATTPNSLLLSWQPPRARITGYIIKYEKPGSPPREVV
PRPRPGVTEATITGLEPGIEYTIQVIALKNNQKSEPLIGRKKTDELPQLVTLPHPNLHGP
EILDVPSTVQKTPFITNPGYDTGNGIQLPGTSGQQPSLGQQMIFEEHGFRRTTPPTMASP
VRHRPRPYPPNVNEEIQIGPVPRGDVDHHLYPHVLGLNPNASTGQEALSQTTISWTPFQE
SSEYIISCHPVGIDEEPLQFRVPGTSASATLTGLTRGATYNIIVEAIKDQKRHKVREQVV
TVGNSVDQGLNQPTDDSCFDPYTVSHYAIGEEWERLSESGFKLSCQCLGFGSGHFRCDSS
KWCHDNGVNYKIGEKWDRQGESGQMMSCTCLGNGKGEFKCDPHEATCYDDGKTYHVGEQW
QKEYLGAICSCTCFGGQRGWRCDNCRRPGAEPGHEGSTGHSYNQYSQRYHQRTNTNVNCP
IECFMPLDVQADREDSRE
NT seq
7437 nt
NT seq
+upstream
nt +downstream
nt
atgctcggggatccggggccccggttgctgctgctgctgaccgtcctgttcctggggaca
gcggtgccctccactggagcctcgaagagcaagaggcaggctcagcaggtcgttcagccc
cagtccccgttggctgtcagccaaagcaagcctggttgttatgacaatgggaaacactat
cagataaaccaacaatgggagcgcacctacctgggcagtgccttggtctgcacctgttat
ggagggagccggggctttaactgcgagagcaagcctgaacctgaagagacttgctttgac
aagtacaccgggaacacttaccgggtgggcgacacttacgagcgccctaaggactccatg
atctgggactgcacctgcattggggctgggcgagggagaataagctgcaccattgcaaac
cgctgccatgaagggggtcagtcctacaagattggtgacacctggaggagaccacacgag
actggtggttacatgttggagtgtgtgtgtctcggtaacgggaaaggagaatggacctgc
aaacccatagctgagaaatgttttgatcacgctgctgggacttcctacgttgtcggggag
acctgggaaaagccttatcaaggctggatgatggtggattgtacttgtctgggagaaggc
agtggacgcatcacctgtacctccaggaacagatgcaacgatcaggacactaggacatcc
tatagaattggggatacctggcgcaagaaggacaatcgggggaacttgctccaatgcatc
tgcactggcaacggccgtggcgagtggaagtgtgagaggcacacaaccctgcagaccacg
tctgccggatctggctccttcacagacgtccgaacggccatttaccagccacagcctcac
ccccagccggctccgtacggtcactgtgtcacagacagtggtgtggtttactccgtgggc
atgcagtggctgaaggcacaaggaaataagcaaatgctttgcacttgcctgggcaatgga
gtcagctgccaagagacagctataacccagacgtatggtggcaattcaaatggggagcct
tgcgtcctaccattcacctacaacggcaggactttctactcctgcaccacagaagggcga
caggatggacatctctggtgcagcacaacttccaattatgagcaagaccagaaatattct
ttctgtacagaccatactgtcttggttcaaactcgaggtggaaattccaatggtgccttg
tgccactttcccttcctgtacaacaaccaaaactacaccgactgtacatccgagggcagg
agggacaacatgaaatggtgtggaaccacacggaactatgacgctgaccagaagtttgga
ttctgccccatggctgcccacgaggaaatctgtacaaccaatgaagggatcatgtatcgc
attggagaccagtgggacaaacagcatgatatgggccacatgatgagatgcacatgtgtt
gggaacggtcgtggagaatggacatgtgtcgcctactcccagctccgagatcagtgcatc
gtcgacgacatcacatacaatgtgaatgacacattccacaaacgtcacgaagagggacac
atgctgaattgtacctgcttcggtcagggcaggggccggtggaagtgcgatcccattgat
caatgccaggattcagaatcccgtaccttttatcaaattggagaatcatgggagaagttt
ttgcatggagtcaggtaccagtgctattgctatggccgtggcattggggagtggggctgc
cagcccatacagacctatccaggttcaactggtcctgtccaagtaataatcactgagacc
cccagtcagcccaactctcaccccatccaatggaatgcaccagaaccatctcacatttcc
aagtacattctcagatggaaacctaaaaattctccagaccgttggaaggaagccaccatt
ccgggccacttaaactcctacaccatcaaaggcctgaggccaggtgtggtatacgagggc
cagctcatcagcgtccagcactacggccaaagagagatgacgcgcttcgacttcaccacc
accagcacaagcccagtggtgaccagcaacaccgtgacgggagagacaacacccttttct
cctgttgtggccacctccgaatccgtgactgaaatcacagccagcagcttcgtggtctcc
tgggtctcggcttcggacactgtgtccggattccgggtggagtatgagctgagtgaagag
ggagatgaacctcagtacctggatcttcccagcacagccacttctgtgaacatccctgac
ctgcttcctggccgaaaatacattgtgaacgtctatcagatatccgaagaaggagaacag
agtttgattctgtctacctcacagacaacagcacctgatgcccctcctgaccctaccgtg
gaccaggttgatgacacctcgattgtcgttcgctggagcagaccccaggcgcccatcaca
ggatacagaatcgtctattccccatcagtagagggtagtagcacagaactcaaccttcct
gaaactgccaactctgtcactctcagtgacttgcagcctggtgttcagtataacatcact
atctacgctgtggaagaaaatcaagagagtactcctgtcttcatccaacaagaaaccact
ggcgtcccacgttcagataaagttccccctcccagagacctgcagtttgtggaggtgacg
gacgtaaagatcaccatcatgtggacaccccccgagagcgcggtgaccggttaccgagtg
gacgtgatccccgtcaacctgcctggggaacacgggcagaggctgcccaccagcaggaac
acatttgcagaagtcactggcctgtcccctggggtcacctatcacttcaaagtcttcgcc
gtgaaccacgggagggagagcaagcctctgacggcacaacaggcgaccaaattggatgct
cccaccaacctccagtttatcaatgaaactgacaccaccatcatagtgacctggactcca
cctcgtgcccggatagccgggtaccgactgaccgtgggcctgacccgtggaggccagccc
aagcagtacaacgtaggtccctcgtccacgcagtatccactgaggaatctgcagcctggc
tctgagtactccgcaaccctcgtggccgtgaaaggcagccagcagagccccagagccact
ggagtcttcaccaccctgcagcctctgggctccatcccaccttaccacacagaagtgact
gaaaccaccattgtgattacatggacacctgctccaaggattggttttaagctgggtgta
cgaccaagccagggaggggaagcaccacgagaagtgacctcagagtcaggaagcatcgtt
gtgtctggcctgactccaggcgtggaatacatttacaccatctcagtcctgaaagacggg
caagagagagatacaccaattgtgaagaaagtggtgacaccactgtctccaccaaagaac
ttgcacctggaaacaaaccccgacactggcgtgcttactgtctcctgggagaggagttcc
accccagacattactggctatagaattaccaccacccctacaaatggccagcagggctat
tctttggaagaagtggtccatgccgatcagagttcctgcacttttgaaaacctgagtcct
ggcctggagtacaatgtcagtgtttacactgtcaaagatgacaaggaaagtgtccctatc
tctgataccatcatgccagaggtgccccagctcactgacctaagctttgttgatataacc
gattcaagcatcggcctgaggtggaccccgctaaactcttccaccattattgggtaccgc
atcacagtagttgcggcaggagaaggtatccctatttttgaagattttgtggactcctca
gtaggatactacacagttacagggctggagcctggcattgactatgacatcagcgttatc
actctcattaatggcggagagagtgcccctactacactgacacaacaaaccgctgtccct
cctcccactgacctgcgatttaccaatgttggtcccgacacgatgcgtgtcacctgggcc
ccacctccatccattgaattgaccaacttactggtgcgctactcgcctgtgaaaaatgag
gaggatgttgcagaattgtcagtttctccttcagacaatgcagtgttcttaacaaatctc
ctgcctggaacagagtatttagtcagcgtctccagtgtttacgagcagcatgagagcgta
cctcttagaggaagacagaaaactggtctcgattccccaactggcattgacttttctgat
atcactgccaactctttcactgtccattggattgctcctcgagctaccatcaccggctac
aagatccgccatcatcctgagcacatgagtggaagacctcgggaggatcgagtgcctccc
tctcggaattccatcacactcaccaatctcaatccgggcacagattatgtggtcagcatt
gtcgctcttaatggcaaagaggaaagtccttccttggttggccagcaaacgacagtttct
gatgttccaagggacctggaagtcatcgctgccacccccactagcctgttgatcagctgg
gatgctccggccgttacagtgagatattacaggatcacctatggagaaacaggaggaagt
agccctgtccaggagttcactgtgcctgggagcaagtctacagctaccatcagtggtctt
aaacctggagcagactacaccatcaccgtttatgctgtcactggccgtggggacagcccg
gcaagcagcaagcccatttccattgattaccgaacagaaattgacaaaccatcccagatg
caagtgactgatgtccaggacaacagcattagtgtcaggtggctgccttcaagttccccc
gttaccggttacagagtgaccactactcctaaaaatggcccaggaccatcgaaaacaatg
actgcaggtccagatcaaacagaaatgacaattgaaggcttgcagcccacagttgagtac
gtggttagtgtctacgctcagaatcgaaacggagagagtcagcctctggttcagacagca
gtaaccaacattgatcgccctaaaggactggcattcactgatgtggatgtcgattccatc
aaaattgcttgggaaagcccacaggggcaagtttccaggtacagggtgacctactcgagc
cctgaggatggaatccatgagctattccctgcacctgatggtgaagaagagactgcagag
ctgcaaggcctcaggccgggttctgagtacacagtcagtgtggttgccttgcacgatgat
atggagagccagcccctgattggaacccagtccacagccattcctgcaccaaccaacctg
aagttcactcaggtttcaccaaccagcctggccgcccagtggacggcacccaatgttcag
ctcactggatatcgagtgcgagtgacccctaaggagaagaccggaccaatgaaggaaatc
aaccttgctcccgatagctcatctgtggttgtatcaggactcatggtggccactaagtat
gaagtgagcgtctatgctctaaaggacactttgacaagcagaccagctcagggggtcgtc
acgactctggagaatgtcagccctccaagaagggcccgtgtgacagatgctactgagacc
accatcaccattagctggagaaccaagactgagacgatcaccggcttccaagtcgatgcc
atcccagccaacggccagactccgattcagagaaccatcaagccagatgtcagaagctac
accatcacaggtttacaacccggcactgactacaagatccacttgtacaccttgaatgac
aatgcccggagctcccctgtggtcatcgacgcctctactgccattgatgcaccatccaac
ctgcatttcctggccaccacacccaactctctgctgttatcatggcagccacctcgtgcc
aggattactggttacatcatcaagtatgagaagcccgggtcccctcccagagaagtggtc
cctcggccccgccctggtgtcacagaagctactattactggtctggaaccaggaatcgag
tacacaatccaagtcattgccctcaagaacaatcagaagagtgagcctctgatcgggagg
aaaaagacagatgagcttccccaactggtaacccttccacaccccaatcttcatggacca
gagatcctggatgttccctccacagttcaaaagacccctttcatcaccaaccctgggtat
gacactggaaacggtattcagcttcctggcacttctggtcagcagcccagtcttgggcaa
caaatgatctttgaggagcatggttttaggcgaaccacaccgcccacaatggccagcccc
gtaaggcataggccaagaccgtatccaccgaatgtaaatgaggagatccaaattggtcct
gtccccaggggagacgtagaccatcatctctaccctcacgttctgggactcaatccaaat
gcttctacaggacaagaagctctctctcagacaacaatctcatggaccccattccaggaa
agctctgagtatatcatttcatgtcatccagttggcattgatgaagaacccttgcagttc
cgagttcctggaacttctgctagtgccaccttgacgggtcttaccagaggggccacctac
aacatcatagtggaggcaataaaagaccagaagaggcacaaggttcgggagcaagtagtt
accgtgggcaattctgttgaccaaggcctaaaccaacccacggatgactcgtgcttcgac
ccctacacggtttcccattatgccattggagaggagtgggagcgattgtctgaatctggc
tttaaactctcatgccagtgcttaggctttggcagtggtcatttcagatgtgattcatct
aaatggtgccatgataatggtgtgaactacaagattggagagaagtgggatcgtcaggga
gaaagtggccagatgatgagctgcacgtgtcttggaaatggaaaaggagaattcaagtgc
gatccccatgaggcaacgtgttacgacgatgggaagacgtaccacgtgggagaacagtgg
cagaaagaatatcttggtgccatttgctcctgcacgtgctttggaggccagcggggctgg
cgctgtgacaactgccgcagaccaggggctgaacctggtcacgaaggctcaactggccac
tcctacaaccagtattcgcagagataccatcagagaacaaatactaatgtcaactgccca
attgagtgcttcatgcctttagatgtacaggctgacagagaagattcccgagagtaa
DBGET
integrated database retrieval system
