KEGG   Ogataea parapolymorpha: HPODL_01182
Entry
HPODL_01182       CDS       T08137                                 
Name
(RefSeq) Vacuolar protein sorting-associated protein 4
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
opa  Ogataea parapolymorpha
Pathway
opa03250  Viral life cycle - HIV-1
opa04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:opa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    HPODL_01182
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    HPODL_01182
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:opa04131]
    HPODL_01182
   03400 DNA repair and recombination proteins [BR:opa03400]
    HPODL_01182
Membrane trafficking [BR:opa04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    HPODL_01182
DNA repair and recombination proteins [BR:opa03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    HPODL_01182
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 AAA_16 RNA_helicase AAA_5 RuvB_N AAA_22 AAA_14 AAA_18 TIP49 DUF815 IstB_IS21 AAA_17 AAA_33 AAA_25 AAA_2 AAA_24 Torsin Parvo_NS1 nSTAND3 NACHT Mg_chelatase AAA_28 AAA_7 DUF5906 PhoH Bac_DnaA Cytidylate_kin Zeta_toxin bpMoxR DUF2098 Rio2_N
Other DBs
NCBI-GeneID: 25770646
NCBI-ProteinID: XP_013933156
UniProt: W1Q8E9
LinkDB
Position
VI:complement(155611..156930)
AA seq 439 aa
MSSASEFLDKGVDLVKKAIEADSASKYDEAYRLYYNGLDYLMLALKYEKNPKSKETIRSK
FTEYLSRAEQLKEYLDKKQQQDQTGEASATSGSVKAKKTSGGEDDDNDSDTKKLRGALAS
SILSERPNVQWSDIAGLELAKEALKEAVILPVKFPHLFRGKRKPVSGILLYGPPGTGKSY
LAKAVATEANSTFFSVSSSDLVSKWMGESERLVKQLFTMAREQKPAIIFIDEVDALCGPR
GEGESEASRRIKTELLVQMNGVGNDSDGVLVLGATNIPWQLDAAIRRRFERRIYIPLPDQ
EARVEMFKLNIGDTPCSLTTQDYHTLAQMTDGYSGHDVSVVVKDALMQPIRKIQMATHFK
KVVSTDEEGQELVQYTPCSPGDSEAIEMSWLDLDGEQLKEPELGIKDFIKAIKTNKPTVN
QKDLDKFIEFTNDFGSEGN
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgtcgagtgccagcgagtttttggacaagggcgtggaccttgtgaagaaagccattgag
gcagatagtgccagcaaatatgatgaggcgtacagactgtactacaacggcctggactac
ttgatgctagccctcaagtacgaaaaaaatcccaagtctaaggagaccatcaggtccaaa
ttcaccgagtacttatcgcgcgcagaacaattaaaggagtatcttgataagaaacaacag
caggatcagactggtgaggcaagcgcgacgtctggatctgtgaaagcgaagaagactagc
ggaggagaagatgacgacaatgacagcgatacaaaaaaactgagaggagcccttgctagt
tcgattctaagcgaacggcccaacgtgcaatggagcgatattgcagggttggaacttgca
aaagaggctttaaaggaggctgtcatattgccggtcaagtttcctcatctattcagaggc
aaaagaaaaccagtttctggaattctcttatacggacctccaggtaccggtaagtcttat
ttggcgaaagcagttgccacagaggctaattcaacattcttttccgtctcttcgtccgat
ctggtgagtaaatggatgggtgagtctgaaagattggtgaaacagttgtttacgatggcc
agggagcagaagccggcaatcattttcatcgacgaagtcgacgcgctatgtggtccaagg
ggagaaggtgagtccgaggcttcgcggaggatcaaaacagaacttttggttcagatgaac
ggtgttggtaatgactctgacggtgttttagtgcttggagcgacgaacattccatggcag
ttggatgcagctatcagaagacggtttgagcgtaggatatatattcctttacccgaccag
gaagccagagttgaaatgttcaagctgaatatcggagatactccgtgctcccttacaacg
caggattaccatacacttgcgcaaatgacggatggttattcgggacacgacgtcagtgtt
gttgtgaaagacgcgcttatgcaaccgattcgtaagattcagatggctacgcatttcaaa
aaggtggtgtccacggacgaggaaggacaggagctggtgcaatacacaccatgctctccg
ggggacagtgaggcaattgaaatgagctggttagatctcgacggcgagcaactgaaagaa
ccggagctaggtatcaaagatttcatcaaagcgattaaaaccaacaagcctacggtgaac
cagaaagacctggacaaattcatcgagtttacgaacgatttcggctcagagggaaactag

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