KEGG   Ogataea parapolymorpha: HPODL_01201
Entry
HPODL_01201       CDS       T08137                                 
Name
(RefSeq) DNA polymerase epsilon subunit 2
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
opa  Ogataea parapolymorpha
Pathway
opa03030  DNA replication
opa03410  Base excision repair
opa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:opa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HPODL_01201
   03410 Base excision repair
    HPODL_01201
   03420 Nucleotide excision repair
    HPODL_01201
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:opa03032]
    HPODL_01201
   03400 DNA repair and recombination proteins [BR:opa03400]
    HPODL_01201
Enzymes [BR:opa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HPODL_01201
DNA replication proteins [BR:opa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    HPODL_01201
DNA repair and recombination proteins [BR:opa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      HPODL_01201
SSDB
Motif
Pfam: DNA_pol_E_B
Other DBs
NCBI-GeneID: 25770665
NCBI-ProteinID: XP_013933176
UniProt: W1Q8G3
LinkDB
Position
VI:complement(185905..187839)
AA seq 644 aa
MESPAVLPISLKPSNLRPLAYRVLSKKHGLNIQSSALEKLSEYVGKRFGQEWRGAKTIAF
LEEVARLWKEQNKGLFLDGDNIDVVIKEISLKQEKQEKASRQSSAIEPKTNLAGLVTNEL
RESQSFEVHQDPLEPAALEQVQWKDFFKAVDIKNYRRYRYNHVRKQFDVLSADAGGDKLV
LPSTQDAVNLFIQRFHLLKDRLLRNENFQPTTFSAVNSFTSNGPKEVENQQVTSIKNLLG
RHGQRFFLFGLLTRSALGLWQLQDDTDSIELDLGQTLFPQNCYFTEGNFIICEGIYSNSG
KFYVSTMIHPPAEKRETSLEVLGKMDFNSVYSNSGRIDPVLRSKLLHLEKDLADHKFIFL
GGDIYLSDAKVMEGLKKLLGKLNEELETGSSTPVALIFNGSFTSRPFTSTQVSYNSQVTS
SGEYKSYFDSLASILEPFSELCATCKFVFVPGDNDPWSSVVTKGSNSVWPKFRLPKIFGN
RLTRLVKDIEWCSNPSKLIYLTHEVLLVRDDLAGRFRRNDISHISKIKENIEADEGELEI
DKLSKSKIAPDVLEARKVVKTLLDQGYLSPFIQSIRPLVANYANMLNLIPLPTLLMLADT
TCPRFDLIYENCHVLNPGKFFDNNKFNYMEYSPSSRKAKLRELY
NT seq 1935 nt   +upstreamnt  +downstreamnt
atggagtctcccgcagttttgccgatttctctgaagccatccaaccttcggcctttggca
taccgcgtgctttcgaagaaacatggtctcaatattcaatcaagtgcgctggagaagctg
agcgagtacgtggggaagagatttggccaggaatggcgtggggctaaaacgatcgcgttc
ctggaagaagtcgccaggctctggaaagagcaaaacaaaggtttgttcctggatggggac
aacattgacgttgtgatcaaggagatttcattgaagcaagagaagcaggaaaaagctagc
cgtcagagctcggccatcgagcccaaaaccaatttggcaggtctcgtgaccaacgagcta
cgagaaagtcagtcattcgaggtacaccaggatcccttggaacctgccgcccttgaacag
gtgcagtggaaggattttttcaaggctgtggacatcaagaactacagacgatacaggtat
aatcatgtgcgcaaacagttcgatgttttgtctgccgacgctggtggtgacaaactggtt
ttgccgtcaacacaagatgctgttaacttgtttatccagcgatttcatctcctcaaggat
agactcctcagaaatgagaacttccagccaaccaccttcagtgctgtcaattcatttaca
agcaacgggcccaaagaggttgaaaaccagcaggttacatctatcaagaatttgttgggt
cggcacggacaacgattctttctctttggattgctgactcggagcgcgctgggtctgtgg
caacttcaggacgacactgattcgatagagcttgatcttggtcagacgctgtttcctcag
aactgctacttcactgaggggaactttatcatctgtgaaggtatttactccaacagcggc
aagttttatgtcagcacaatgatccatcctccagcggaaaaaagagagacgtctctggaa
gttcttggcaagatggacttcaattctgtatacagcaacagcggacgtatcgatcctgta
ttgcgctcaaaactattgcatttggagaaggatctggcagaccataagtttatctttctg
gggggtgatatatacctgtctgatgcaaaagtgatggagggcttgaaaaagctacttggc
aaactcaacgaggagcttgaaacgggatcttcgacacccgttgccctaatattcaatgga
tcctttacctcgcggcctttcacgtcgactcaagtctcctacaacagccaggtcacctcg
tcaggtgagtacaagtcttatttcgattctttggcatccatccttgaaccattttctgaa
ctgtgcgcaacatgtaaatttgtgtttgttccaggcgacaatgatccctggtcatcagtc
gtcaccaaaggttccaattctgtgtggcccaaattcaggcttcccaagattttcggaaac
cggttgaccagactagtgaaagatatagaatggtgctccaatccatcgaaactaatctat
ttgacccacgaggttctactagtccgtgacgacctggcaggacggtttcgtcgaaatgat
attagccacatctccaagatcaaggaaaacatcgaagcagatgaaggggagctggagatc
gataagctttcaaaatccaagattgcaccagacgtgcttgaggccagaaaggttgtcaag
acattactagaccaaggatatctttcaccgtttatccaatccatcaggccgctggttgcc
aattacgctaatatgctaaacctgataccccttcctacgcttctaatgctcgctgacaca
acatgtccgcggtttgacctcatctacgaaaattgccatgttctcaacccaggaaagttc
ttcgacaacaacaagttcaactacatggagtattctccctcatctagaaaagccaaactc
agagagttgtattaa

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