Ogataea parapolymorpha: HPODL_02784
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Entry
HPODL_02784 CDS
T08137
Name
(RefSeq) hypothetical protein
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
opa
Ogataea parapolymorpha
Pathway
opa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HPODL_02784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opa03400
]
HPODL_02784
DNA repair and recombination proteins [BR:
opa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
HPODL_02784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Cas5fv_helical
Motif
Other DBs
NCBI-GeneID:
25772234
NCBI-ProteinID:
XP_013932577
UniProt:
W1Q820
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All DBs
Position
VII:719361..720800
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AA seq
479 aa
AA seq
DB search
MDIIDLESSDPPGPRSAHLFVSSSPTPTRRRLLSVKTSAPKLSRSAARSSPSSLPSIIEI
TSSPLPAKRKRRPEQPSSLSNAIVLESGSESDSEPAERKKKIALPSSPTGAGDESVLEID
PVGPSDDIQLGSIFDISTKTAITPSKPKQPASAVTPASTTEGPEGDLDALLEHAKKFKSK
ELKQVNKMQRTKDELLAEMSVEIETRLHAKLAGINADFESFLAPIKVYTASLYLPLIQFK
RQVEAVYHEQKGTYVPIDKYMKTESTVVLYYDAAELVDKIRDDTLRTIILKVKRMRQDAN
VVLMINGYQQHLQTLRAQHNRAFVSQVMRKMDHDKTQRVLGPANNTVSAETVRKKLVELE
VFFGIHIFPIKGLRELVDWIRSFSYTMAQKNYDPHERNRELANIGNIRCGQTPEECYQES
LKQLKYLVTSSARTLAKKYPTLVQLADKLQTGVPSLIRTDVEQNLRKVFTSTDPNELLD
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggacatcatcgaccttgaatcgtccgatccgcccggaccgcgctccgcgcacctgttt
gtatcctcatcgccaactcccacgagacggcggcttttgtctgtcaaaacttccgcaccc
aaactcagcagatcagcggccaggtcgtccccctcgtctcttccaagcatcatcgaaatc
acctctagcccgctccctgcgaaacgaaagcggcgtccagagcagccgtcgtcgttgtcg
aacgccattgttcttgaatcgggctcagagtcggactcagaaccggccgaacgcaaaaaa
aaaatagcccttcccagctccccgaccggcgctggagacgagtccgtcctggagatagat
cccgtgggtccgtcagacgatatccagttgggcagcatttttgatataagcacaaaaacc
gccatcactccctcaaaaccgaaacagcctgctagtgctgttactcctgcttccacaacg
gaggggcccgagggggaccttgatgcgctgctggaacacgcgaaaaagttcaagagcaag
gagctgaaacaggtaaacaagatgcaacggacaaaggacgagttgctggccgaaatgagc
gttgaaattgagacgcgactgcacgcgaagctggccgggatcaacgctgatttcgagagt
tttcttgctcctatcaaagtgtacacggcatctctgtatctaccgcttatccagttcaaa
agacaggtcgaggcggtgtaccacgagcaaaaaggaacgtatgtgcctattgacaagtat
atgaagaccgagtcgactgtcgtgctctattacgatgctgccgagctcgtggacaagatt
agggatgatacgctgcgcacaataattctcaaggtaaaacggatgcgccaggacgccaac
gttgtcctcatgatcaacggttatcaacaacacttgcaaacgctgcgcgcacaacataat
agggcgtttgtgagccaggtgatgcggaaaatggaccacgacaagacgcagagggtcctg
ggccctgccaacaacacagtctccgcagaaacggtgcgcaaaaaactggttgaactggag
gtgtttttcggaatccatattttccccatcaagggtcttcgggagcttgtggattggatc
aggtctttcagttataccatggcacaaaagaactacgacccccacgaaagaaaccgggag
ctggcaaatataggcaatatccgctgcggccagacgcccgaagagtgctaccaagaatcg
ctcaaacaacttaaatacctagttacctcttcagcacgcacgctcgccaagaaatacccc
actctcgtgcagctggctgataagttgcagacgggagtgccatcgctcatccgaactgac
gtcgagcagaatctcaggaaagtgttcacaagcactgatcccaacgagttgctcgactaa
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