Ogataea parapolymorpha: HPODL_03956
Help
Entry
HPODL_03956 CDS
T08137
Name
(RefSeq) Small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
opa
Ogataea parapolymorpha
Pathway
opa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HPODL_03956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opa03019
]
HPODL_03956
03041 Spliceosome [BR:
opa03041
]
HPODL_03956
03032 DNA replication proteins [BR:
opa03032
]
HPODL_03956
Messenger RNA biogenesis [BR:
opa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
HPODL_03956
Spliceosome [BR:
opa03041
]
Complex A
U1 snRNP components
Sm proteins
HPODL_03956
U2 snRNP components
HPODL_03956
Complex B
U1 snRNP components
HPODL_03956
U4/U6.U5 tri-snRNP components
HPODL_03956
Complex C
U2 snRNP components
HPODL_03956
DNA replication proteins [BR:
opa03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
HPODL_03956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
25773387
NCBI-ProteinID:
XP_013934210
UniProt:
W1QBE7
LinkDB
All DBs
Position
V:complement(313638..313901)
Genome browser
AA seq
87 aa
AA seq
DB search
MSFQPINPKPYLQSLVGKPVVIKLKFNNIEYHGKLLSIDNYMNLLLDKDVKEIDTAAETS
TELGDELFVRCNNVLWVGEKQDNEQAE
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccagcccatcaatcctaaaccctatctgcagtcgcttgtcggcaagcctgtg
gtgataaagctgaagttcaacaatatagagtaccacggaaagctgctctctatcgacaat
tacatgaatcttttgctggacaaagacgtcaaggagatcgacaccgccgccgaaacgagc
acggaacttggtgatgaactgtttgtgcggtgcaacaacgttttgtgggtaggcgagaaa
caggacaacgagcaggcagagtga
DBGET
integrated database retrieval system
