Ogataea parapolymorpha: HPODL_04749
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Entry
HPODL_04749 CDS
T08137
Name
(RefSeq) F-box/LRR-repeat protein 13
KO
K10273
F-box and leucine-rich repeat protein 7
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opa04121
]
HPODL_04749
Ubiquitin system [BR:
opa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
HPODL_04749
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
LRR_6
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
25774174
NCBI-ProteinID:
XP_013936571
UniProt:
W1QI03
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Position
II:395343..398210
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AA seq
955 aa
AA seq
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MKPTTSYRSSGLLDFRPCRRSPLSDDEGDRYLAGERRRKRSREHSSVSLDAEFDSSTDEN
SIKRQQRRRKCVDPDSSEDEDYAEITSIPPELLNRLKSFALFENAPKSFLTALGRSLKPV
QYFPQEYIVKAGEQAKAMYWILRGTVGVTSTDGEALYAELAAGSFFGEIGILFNRPRTAT
VVARTKVLLGVLTKGALGVVLSDYPKIERLIRDEGQERLAMQEKRKQKTKSSANLLFQRR
ENLLVPSKYSNDSITAFENEPLPGPVLPPTSDAATPVLKTINPFDPSQIYIQQPSPIPTG
SIDNSISVREFLSGLPIFKSLPSDVFHELALKVEIKDFKPMEYIFKKGDAGRDIYFVVFG
EVEVLDAEKASHIVARLGSGKYFGEMSFLSSLRDDHDSSKTETRSADVRAVSESEVLVVK
GNILEDLCKRYPVVAEDMKFTACERLKKNDSVVEMVHSADISAHDRNIVSSLTEDSGGKP
IFQSISWYNEAYGSAPPSPHDTVMTPYYRDSVSTTGTQDLTKSNDLSAPSLLSDKYSKPE
KPTIQLYVPSPNPVSGSLYKFGNSLRPPFHYTPHDHRLRLLNINNGRRRSSVLSSGPFPD
SIFMKIFKYLDLPNLMRFATVCKKWKQLLYLGPDLIKTLDLTPWKRDLTDNALIQITNFV
GPRPEVINISSCFHITDAGFCYMINEIGIRGRIKKLYMSNNWNISAMSIMDLSIVARELD
LIDFSNCPKVRDDVIERLITPQGSKYGCPNLRTLNLSYCKYLTDRAMCQIANNASQQLTS
LNLTRCTTITDGGFMFWSQTQFPNLRKLVLRDCTFLSDAAISHLSVACPNLEDLDLTFCC
VLTDNSLAMLYLYCKYLRSLNLSFCGSAVSDNSLASISRLPCLENLSLRGCIRVTRQGVD
KILSNLQNLKFLDLSQCPRVDTYQGKAVEPFEKQPGSRNAYLKISPYRRIIQVTL
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccacaacatcttacagatcgagtgggttacttgacttcaggccttgcagacgc
tctcccttgtcagatgatgaaggggatcgatatcttgctggcgagcggagacgcaaacgc
agtagagaacattcatcggtaagcttagatgcagaatttgattcatctacagatgagaac
tcaatcaaacgacaacaaaggcggagaaagtgcgtggatcctgatagcagtgaagatgaa
gactacgctgagatcactagtattccccctgaattgctcaatagactcaagtcatttgcg
ttattcgaaaacgccccgaaatcttttttgactgccctggggcgttcactgaaaccagtg
cagtactttccacaagaatacatcgtgaaggctggcgaacaggccaaggcgatgtattgg
attttaagaggtacagtgggtgttacatccactgacggtgaagcattgtatgcagaacta
gcggctgggtcattttttggtgagattggtattcttttcaacagaccgagaaccgcaacg
gtggtggccagaacaaaggtgctcttgggcgtcctcaccaagggtgcattaggggttgtt
ttgtcagattatcccaagattgaacgtttgattagagatgaaggtcaggaacgtcttgca
atgcaggagaagcgaaaacaaaaaacgaaatcatccgcaaatcttcttttccagagacgt
gaaaacttattagtaccttcgaagtatagcaacgactcgattactgcctttgagaatgaa
ccattacctggtcctgttcttcctccgacatcagatgctgccacaccagttctaaaaact
ataaacccattcgatccctcgcaaatatacatccaacagccttcaccgatacctacgggt
agtatcgataattctatctctgtaagagaatttttgagcggcctacctattttcaaatct
ctaccatcggacgtgttccatgaacttgccctcaaggtagagattaaagattttaaacca
atggaatatatattcaaaaagggagatgctggaagagacatttattttgttgtgtttggg
gaagttgaagtactagatgctgaaaaggctagccatatcgttgcaagactaggaagcggc
aaatattttggtgagatgtcttttttgtcttctctacgcgatgatcatgattcctctaag
actgagacaagatcggcagatgttcgtgcagtttctgaatctgaagtgcttgtggtgaaa
ggcaacatactagaggatctatgtaaacgttatccggttgttgcagaagacatgaagttc
actgcgtgcgagaggttaaagaaaaacgattccgttgtggaaatggttcattctgccgac
atatcagctcatgatcgaaatattgtatcttccttgactgaggacagcggaggaaaacca
atatttcagagcatctcatggtataatgaggcatatggatcagcacctcctagccctcat
gatactgtcatgacgccatactacagagattcggtgagcacaacgggaacacaagatctc
acgaaatcaaacgatttatcagctccatctttgctatctgataaatattcgaagcctgag
aagccaactattcaattgtacgtgccatcacctaatccagtctcaggatcgctttacaag
tttggaaactcgctcagacctccttttcattatacgcctcatgatcaccgtttacgtttg
ttaaacatcaacaatggccgccgccgatcttctgttttatcttcaggtccctttccggac
tctatctttatgaaaatcttcaagtatctcgatttacccaatttgatgagatttgccaca
gtttgcaagaaatggaaacagcttttatacctgggaccagatttgataaagactcttgat
ctaacgccgtggaaacgagatcttacagacaatgctcttatccagatcacaaattttgtt
gggccacgccctgaagtgataaacatttccagttgtttccacatcacggatgccggtttt
tgttatatgatcaatgaaattggaatacggggccgcataaagaagctctatatgagcaac
aactggaatatttccgctatgtctattatggatctgagcattgttgctagagagttagat
ttgatcgacttttcaaactgcccaaaagttcgcgatgatgtcattgagaggttgattaca
ccacaaggatccaaatatggttgcccgaatttgcggaccttgaatttatcttactgtaag
tacctgacagacagggcaatgtgccagatcgccaataatgcctcgcaacaattaacgtcg
ctcaatcttaccagatgtactacaatcacagacggtggattcatgttttggtcacaaaca
cagtttcctaatttgaggaagcttgtattacgagattgtacctttctctcagatgctgct
atatcccatttatcagttgcgtgtcccaatctagaagacttagatctcaccttttgttgc
gttttgacagataattcgcttgcaatgttatatctttattgcaagtatttgagatctttg
aacctttcattctgtgggtcagcagtcagtgacaactcgctagcttctatatctcgcttg
ccttgtttagaaaatctctctttgagaggatgtatcagggtcactcgccaaggagtcgat
aagatcttatcaaatcttcaaaatctgaagttcttagatttgagtcaatgtccgagggtg
gatacgtaccaaggcaaggccgtagagccatttgaaaagcaaccagggtccaggaacgct
taccttaaaatttcgccatatcgacgaattattcaagtaactttataa
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