Oricola thermophila: HTY61_00050
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Entry
HTY61_00050 CDS
T06643
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
orm
Oricola thermophila
Brite
KEGG Orthology (KO) [BR:
orm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
orm03021
]
HTY61_00050 (rpoH)
Transcription machinery [BR:
orm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HTY61_00050 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
UCR_14kD
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QKV16967
UniProt:
A0A6N1VD68
LinkDB
All DBs
Position
complement(11137..12036)
Genome browser
AA seq
299 aa
AA seq
DB search
MARTNLPSLYGGEGGLTRYLEEIRRFPMLQPQEEYMLAKRYQEHGDPDAAHKLVTSHLRL
VAKIAMGYRGYGLPIGEVISEGNVGLMQAVKRFEPERGFRLATYAMWWIKAAIQEYILRS
WSLVKMGTTANQKRLFFNLRKAKNKIRALGDADLNPDQVKKIATELQVSEEEVLSMNQRM
AGDASLNAPIRATDGESGQWQDWLVDESESQEELLIEEDEREQRSALLHEAMNVLNERER
RIFEARRLSEDPLTLEQLSGEFDISRERVRQIEVRAFEKVQDAVKAAAAEKAKALRQVA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcccggactaatctccctagcctttacggcggcgaaggcgggttgacgcgttatctc
gaggaaatccgccgtttcccgatgctgcagccgcaggaagagtacatgctcgccaagcga
tatcaggagcatggcgacccggacgcagcgcacaagctcgtgaccagccaccttcgcctc
gtcgccaagatcgcgatgggctatcgcggttacggcctcccgatcggcgaagtgatttcc
gagggcaatgtcggcctcatgcaggcagtgaaacgcttcgaaccggagcgcgggttccgg
ctggccacctacgctatgtggtggatcaaggccgccatacaggaatatattctgcggtcg
tggagccttgtcaagatgggcaccaccgccaaccagaagcggctcttcttcaaccttcgc
aaggcgaagaacaagattcgcgcgctaggcgacgccgatctcaacccggaccaggtcaag
aagatcgcaaccgagctgcaggtctccgaggaggaggtcctgtcgatgaaccagcgcatg
gccggcgatgcctcgctcaacgcgcccatccgggcgaccgacggcgaaagcgggcagtgg
caggactggctggtcgacgagagcgaaagccaggaagagttgctcatcgaggaagacgag
cgcgaacagcgttccgcactccttcacgaggcaatgaacgtgctcaacgagcgcgagcgc
cgaatcttcgaggcgcggcggctttccgaggatccgctgacgttggaacagctgtcaggc
gagttcgatatctcgcgtgagcgcgttcgccagatcgaggtgcgagccttcgagaaggtt
caggatgcggtcaaggcagccgcggccgagaaggccaaggcattgcgtcaggtcgcctga
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