Odobenus rosmarus divergens (Pacific walrus): 101380376
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Entry
101380376 CDS
T05148
Symbol
COL23A1
Name
(RefSeq) collagen alpha-1(XXIII) chain
KO
K24355
collagen type XXIII alpha
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101380376 (COL23A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oro00536
]
101380376 (COL23A1)
Glycosaminoglycan binding proteins [BR:
oro00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101380376 (COL23A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
101380376
NCBI-ProteinID:
XP_012423548
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MSPGQRAGGDARKDGPAGGGGRPATAAGAWAVSALCLLLSVGSAAACLLLGAQAAALQGR
VAALEEERELLRRAGPPGALAAWAEPHLERLLREKLEGLAKHRTVREAPTACVCPPGPPG
RRGKAGRRGDPGPPGQSGRDGYPGPLGLDGKPGLPGPKGEKGAPGDLGPRGDQGRDGAAG
PPGPPGPPGARGPPGDTGKDGPRGAEGPAGPKGETGRDGEMGLKGPPGPKGEPGIPGKKG
DDGTPSQPGLPGPPGPKGEPGNAGPRGENGVDGAPGPKGEPGPRGADGVSGLRGPQGLKG
EQGDTVVIDYDGRILDALKGPPGPQGPPGPPGIPGAKGELGLPGAPGIDGEKGPKGAKGD
PGEAGPTGPKGEVGEMGLSGLPGTDGPKGEKGESASDSLRESLAQIIVAPGPPGPPGPPG
PMGLQGIQGPKGLDGAKGEKGVLGERGPSGLPGPAGPPGLIGLPGTKGEKGRPGEPGLDG
FPGPRGEKGDRSERGEKGERGVPGRKGVKGQKGEPGPPGLDQPCPVGPDGLPVPGCWHKV
AQAWGRGPG
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgggccagcgcgccggcggcgacgcgcggaaggacggcccggcgggcggcggg
gggcgccccgcgacggcggccggggcctgggcggtgagcgcgttgtgcttgctgctctcc
gtgggctcggcggccgcctgcctgctgctgggcgcccaggcggccgcgctgcagggccgg
gtggcggcgctcgaggaggagcgggagctgctgcggcgcgcggggccgccgggcgccctg
gccgcctgggccgagccgcacctggagcgcctgctgcgcgagaagttggagggactggcc
aagcaccggacagtccgagaagcgccgactgcctgtgtctgcccaccaggccctcctgga
cggcgcggcaaggctggaagaagaggcgaccccggtcctcccgggcaatcaggacgagat
ggctacccggggccactgggtctggatggcaagcctggacttccaggccccaaaggggaa
aagggtgcacccggagaccttggccctcggggagaccaaggacgagatggagctgctggg
cctccagggccccctggaccccctggggcccggggccctcctggagacacagggaaagat
ggccccaggggagcagaaggcccggcgggtcccaaaggagagactggacgggacggcgag
atgggcctgaagggacccccagggcccaagggtgagcctggcattcctggaaagaagggg
gatgatgggacaccaagccagccagggctccctggacccccaggccccaagggtgagcca
gggaacgcggggcctcgaggagaaaatggtgtggacggcgccccagggccaaagggagag
cctggcccgcgaggcgccgatggagtctcaggactgcggggtccccagggcctcaagggc
gagcaaggagacacagtggtgattgactacgatggccggatcctggatgcccttaagggt
cctcccgggccacaggggcccccagggccacctgggatccccggagccaagggtgagctg
ggattgcctggtgctccgggaatcgacggagagaagggtcccaaaggagccaaaggagac
ccgggagaggctgggccgaccggacccaaaggggaggtgggcgagatgggcctgtcgggc
ctcccgggcaccgatggtcccaagggcgagaagggagagtcggcatctgacagcctacgg
gagagcctggcccagatcatagtggcgccaggcccccccggcccccctgggcccccaggc
cccatgggccttcagggaatccagggtcccaagggcttggacggagcaaagggagagaag
ggtgtgttgggtgagagaggccccagcggcctgcctgggccagctggccctccaggcctt
atcgggctgccaggaaccaaaggagagaagggaagacctggggagccaggactagatggg
ttccctggaccccgaggagagaaaggtgaccggagcgaacgtggagagaagggggagcga
ggcgtcccgggccggaaaggcgtgaagggccagaagggtgagccgggaccgccgggcctg
gatcagccatgtcctgtgggccccgatgggctgcccgtgcctggctgttggcataaggtg
gctcaggcttggggccgtggtcctgggtga
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