Opitutus terrae: Oter_0635
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Entry
Oter_0635 CDS
T00689
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ote
Opitutus terrae
Brite
KEGG Orthology (KO) [BR:
ote00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ote03021
]
Oter_0635
Transcription machinery [BR:
ote03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Oter_0635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
GerE
HTH_23
Arc_PepC
HTH_Mga
HTH_Tnp_Tc3_2
HTH_30
Phage_antitermQ
SH3BP5
UPF0122
DUF1492
HTH_38
GTA_holin_3TM
Motif
Other DBs
NCBI-ProteinID:
ACB73925
UniProt:
B1ZTI0
LinkDB
All DBs
Position
complement(774339..774974)
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AA seq
211 aa
AA seq
DB search
MDAVKSVGKTLVASPDRQHEADSDLAIVRQVQAGEVAQFDQLVTKYRARLYGVIYHLTSN
REDAADLTQDAFIKAFQSINRFQGQSSFFTWLYRIAVNSTLTHLRKQRLRTFFSFEKIDE
EDDVAKEVVAALTDATGADRETFAHELQEKLNEAMQKLSIKHRTVITLFEIDGLSHQEIA
EVMDCSVGTVRSRLHYAKQLLQSELQSYIRR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagtcaaatcagtcggaaagacgctcgtggcgtcacccgaccgccagcacgag
gcggactctgatttggcgatcgtgcgccaggtgcaagcgggcgaagtggcgcagttcgac
cagctcgtcaccaaatatcgcgcgcggctctacggggtgatctatcacctcacctccaat
cgtgaggacgccgcggatctgacccaggacgccttcatcaaggcgttccaatcgatcaac
cgttttcagggccaatcctcgtttttcacctggctgtaccggattgccgtgaactccacg
ctgacgcacctgcgaaagcagcgactgcggacctttttcagcttcgaaaagatcgatgag
gaggacgacgtggcgaaggaggtcgtggcggcgctcacggacgccaccggagccgaccgg
gagacgtttgcccacgagcttcaggaaaaattgaacgaggctatgcagaaattgtctatc
aagcatagaaccgtgattacgcttttcgaaatcgatggcctcagccatcaggagatcgcc
gaagtgatggactgctcggtgggcacggttcgttcccggctgcactacgccaagcagctg
ctccagtcagaattgcagtcctatatccgcagatga
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