Ottowia oryzae: C6570_12640
Help
Entry
C6570_12640 CDS
T05363
Name
(GenBank) LuxR family transcriptional regulator
KO
K18098
LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
Organism
otk
Ottowia oryzae
Pathway
otk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
otk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C6570_12640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otk03000
]
C6570_12640
Transcription factors [BR:
otk03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
C6570_12640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Autoind_bind
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_28
HTH_10
HTH_30
Xre-like-HTH
Sigma70_ECF
HTH_38
HTH_24
HTH_29
LexA_DNA_bind
HTH_11
Terminase_5
HTH_40
DUF746
HTH_36
DUF6362
HTH_5
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AVO34988
UniProt:
A0A2S0MGH9
LinkDB
All DBs
Position
complement(2770488..2771210)
Genome browser
AA seq
240 aa
AA seq
DB search
MTPADAAERAFATAIAIQGAKTLVAIQAAVRALATPLGYDRFVLFSASAARDEVVDTFYW
LEGDWFGDGTELDAQTYLRRCPVSRHMLSLHEPFFWTKTGARDKDLYRVVRTPQGVGVHG
LQVPVFGPLGLEGAMSLGGERIDASAQTKLALSLVGQAAFLAARKLLEMPVEEAMTALSD
REREVLAWTAAGRRQTEIAETLGLSERTVENHLRRVRRRLGVATTAQAVRVAIRNGEIAA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgacccctgccgacgcggccgagagggcgttcgccaccgccatcgccattcagggggcc
aaaaccctggtggcgattcaggccgcggtgcgcgcgctggcaacgccgctgggctacgac
cggtttgtgcttttctctgcgtccgccgcccgcgacgaagttgtcgacaccttttactgg
ctggaaggcgactggttcggcgacggtacggaattggacgcccagacctacctgcgccgc
tgccccgtttcgcgccacatgctcagcctgcatgagcctttcttctggacgaagacgggc
gcccgtgacaaggacctgtaccgcgtggtgcgcacgccgcagggcgttggcgttcatggc
ctgcaggttccggtgttcgggccgctggggctggagggcgccatgagcctgggcggcgag
cgcatcgatgcgtcggcccaaaccaagctggcgctttcgctggtggggcaggcagcgttt
cttgcggcgcgcaagttgctggaaatgccggttgaagaggcgatgaccgcgctatcagat
cgagagcgagaggtgcttgcctggacagcggcaggccgccgtcagacggagattgctgaa
acgctgggcttgtctgagcggacggtcgagaatcacctgcggcgagtgcgacggcgcttg
ggcgtggcaaccaccgcgcaggcggtgcgggtcgcgatccgcaacggagagatcgcggcg
tga
DBGET
integrated database retrieval system
