Oryzomicrobium terrae: OTERR_00030
Help
Entry
OTERR_00030 CDS
T06190
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
otr
Oryzomicrobium terrae
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
otr03032
]
OTERR_00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
otr03400
]
OTERR_00030 (gyrB)
Enzymes [BR:
otr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OTERR_00030 (gyrB)
DNA replication proteins [BR:
otr03032
]
Prokaryotic type
DNA Topoisomerases
OTERR_00030 (gyrB)
DNA repair and recombination proteins [BR:
otr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OTERR_00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
DUF1919
Motif
Other DBs
NCBI-ProteinID:
QEL63479
UniProt:
A0A5C1E4M8
LinkDB
All DBs
Position
2841..5330
Genome browser
AA seq
829 aa
AA seq
DB search
MSEENPQMNNPQEASPAYGESSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVVDNS
IDEALAGHCDDIVVTIHADNSISVTDNGRGIPTGVKMDDKHEPKRSAAEIALTELHAGGK
FNQNSYKVSGGLHGVGVSCVNALSKWLRLTVRRDGKRHFIEFNRGVPVERVIEVRDGFEV
SPLKILGDTDKRGTEVHFLADDEIFGNVEFHYEILAKRLRELSFLNNGVSIRLVDQRSGK
EELFAFAGGVQSFVEYINRNKSVLHPNIFYSAGEAKVADGVTIGVEVAMQWNDTYQEQVL
CFTNNIPQSDGGTHLTGLRAAMTRIINKYIEENEIAKKAKVEITGDDMREGLACVLSVKM
PDPKFASQTKMKLVSSEARPAVEEVVAAKLAEFLLERPLDAKTITGKIVEAARARDAARK
AREMTRRKGVLDGVGLPGKLADCQEKDPSLCELYLVEGDSAGGSAKQGRDRKFQAILPLK
GKILNVEKARFDKLISSQEIATLITALGTGIGKDEYKPEKLRYHRIIIMTDADVDGAHIR
TLLLTFFYRQMPELVERGHIYIAQPPLYKVKHGKTERYLKDDHEYHQFLLKMALEESRLI
PKAGAEPITGAALEELAREYLLSEAVINRLSNLINPEVLHAIVAKDLQVDVSREAAARAS
AEALSAHVNHGTQIVAHFNEADERWQLRVERMHHGNLKVGVIDEDFVRSGDYTQLRKAAT
LLSGMFGPGGSIERGEKKQAVADFAEAMAWLQNEVERGISKQRYKGLGEMNPEQLWETTM
DPTVRRLLRVGIEDAISADGVFTTLMGELVEPRRAFIESNALYARNIDV
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaaacccgcaaatgaacaacccgcaggaagcctcaccggcctacggcgaa
tccagcatccagatccttgaaggcctggaggccgtgcgcaagcgcccggggatgtacatt
ggcgacacttccgacggcacgggtctgcaccatctggtcttcgaggtggtggataactcc
atcgacgaagccctggccggtcattgcgacgacatcgtcgtcaccatccacgccgacaac
tccatctccgtcaccgacaacggccgcggcatccccaccggggtgaagatggacgacaag
cacgagcccaagcgctccgccgccgaaatcgccctcaccgaactgcacgccggcggcaag
ttcaaccagaactcctacaaggtttccggcggtctgcacggcgttggcgtctcctgcgtg
aacgccctctccaagtggctgcgcctcaccgtgcgccgcgacggcaagcgccacttcatt
gaattcaaccggggtgtgccggtggaacgggtcatcgaagtgcgcgacggcttcgaagtc
tcccccctgaagattctcggcgacaccgacaagcgcggtaccgaagtgcacttcctggcc
gacgacgagatcttcggcaatgtggaattccactacgaaatcctggccaagcgcctgcgc
gagctgtccttcctcaacaacggcgtcagcatccgcctggtggaccagcgcagcggcaag
gaagagctgttcgcctttgccggcggcgtgcagagctttgtcgagtacatcaaccgcaac
aagtccgtcctgcaccccaacatcttctactccgccggcgaagccaaggtggccgacggc
gtcaccatcggcgtcgaagtggccatgcagtggaacgacacctaccaggaacaggtgctc
tgcttcaccaacaacattccccagtccgacggcggcacccacctcaccggtctgcgggcg
gcgatgacccgcatcatcaacaagtacatcgaagagaacgagatcgccaagaaggccaag
gtggaaatcaccggcgacgacatgcgcgaaggcctggcctgcgtcctctcggtgaagatg
ccggaccccaagttcgcctcccagaccaagatgaagctggtctcctccgaagcccgcccg
gcggtggaagaagtggtggcggccaagctggccgagtttctgctggaacgtccgctcgac
gccaagaccatcaccggcaaaatcgtcgaggccgcccgcgcccgcgacgcggcgcgcaag
gcccgggaaatgactcggcgcaagggcgtgctcgatggcgtcggcctgcccggcaaactg
gccgactgccaggagaaagaccccagcctgtgcgagctgtacctggtcgagggcgactcc
gccggcggctccgccaagcagggccgcgaccgtaagttccaggccatcctgcccctcaag
ggcaagatcctcaacgtggaaaaggcccgtttcgacaagctcatctccagccaggaaatc
gccaccctcatcaccgccctgggcaccggcatcggcaaggacgagtacaagcccgagaag
ctgcgctatcaccgcatcatcatcatgaccgatgccgacgtggacggcgcccacatccgc
accctgctgctcaccttcttctaccggcagatgcccgaactggtggagcgcggccacatc
tacatcgcccagccgccgctgtacaaggtcaagcacggcaagaccgagcgctacctcaag
gacgaccacgagtaccaccagttcctgctcaagatggccctggaagaatcgcggctcatc
cccaaggccggcgccgagcccatcaccggcgcggccctggaagagctggcgcgggaatac
ctgctctccgaggcggtcatcaaccgcctctccaacctgatcaaccccgaggtgctgcac
gccatcgtcgccaaggacctgcaggtggacgtctccagagaggccgccgcccgtgcctcc
gctgaggccctgtcggcccacgtcaaccacggcacccagatcgtcgcccacttcaacgag
gccgacgagcgctggcagctgcgcgtcgagcgcatgcaccacggcaaccttaaggtcggc
gtgatcgacgaggacttcgttcgctccggcgactacacccagctgcgcaaggccgccacc
ctgctctctggcatgttcgggcctggtggcagcatcgaacgcggcgagaaaaagcaagcg
gtcgccgacttcgccgaagccatggcctggctgcagaacgaggtggagcgcggtatttcc
aagcagcgctacaagggcctgggcgaaatgaacccggagcagctgtgggaaaccaccatg
gaccccaccgtgcgccgcctgcttcgcgtgggcatcgaagatgccatcagcgccgacggc
gtgtttaccaccctcatgggcgaactggtggaaccccgccgggcgttcatcgaaagcaac
gcgctgtatgcccggaacatcgacgtttga
DBGET
integrated database retrieval system
