Oncorhynchus tshawytscha (Chinook salmon): 112215734
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Entry
112215734 CDS
T05605
Name
(RefSeq) rabenosyn-5
KO
K12481
rabenosyn-5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112215734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112215734
Membrane trafficking [BR:
otw04131
]
Exocytosis
Others
Others
112215734
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112215734
Protein recycling
Rab4 associated proteins
112215734
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
112215734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rbsn
NPF
FYVE
zf-C2H2_9
zf-Di19
zinc_ribbon_9
IBR
zf-ribbon_3
Motif
Other DBs
NCBI-GeneID:
112215734
NCBI-ProteinID:
XP_024230829
LinkDB
All DBs
Position
LG16:45494420..45501443
Genome browser
AA seq
781 aa
AA seq
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MASSYPPPFEGTGEVKEGFLCPLCLKDLQSFYQLQEHYEEEHSGDDRHVRGQLKSLVQKA
KKAKDKLLKRDGEDKPETGSYESFYYGGVDPYMWEPQELGATRNHMDFFKKHRAARIDHY
VIEVNKLIIRLEKLTSFDRMNIDAGKIRAIEKSVVAWVSDSDVPFCPDCGNKFNLRNRRH
HCRLCGSIMCRKCMEFVPLPLAYKLTSGTREARSVTGSQSQSQSPPTGGGGNVSGMGSRR
GSISSLSSVTSMLEEKDDERIRCCLHCMDTLMKRQQKLEEKDHVPDIVKLYERLRLCMDK
VDERAPEYIRMAESLNAGETTYNLDTAGGLRMEVQKYYELIDALSKKILTLGMKEEPQPH
QKTLQLQRMVRYTATLFVQEKLLGLMSLPTKDKYEDLKEKRKQEQEMRLTQERLIAQVAQ
KRRQDSEKNRPAASTNGEAPQAPRAPRMTKAGGWLPSSDTLHTCGELEDPLLQQIDNIQS
FLRQAKAAQRHDEVAMLEENLRQLQDEYDQQQTSLAIALSQRLAQEESLQQDELQRLEDR
EREHRAQSQAPGSQATYTWQGSLNLTDIGSLHGEEEGEEEVTPKAESSPLSMRAFPALTD
QDEESPPRLRRLRGDVTPPGGEGQNSSSLNPFEEEDSTPVEDPSNPFFEEIQKEHKEVAN
GKKEYNPFEQEEGGEEEQGQAEGATGNPFEVKEENNEGNPFKEASGCTPPGASTNPFEGE
DEEAMPDVDVIEEELLLQQIDNIRAYIFDAKLNGRLDEVELLSENLRELQRTLQEQKSKT
H
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagctacccacccccattcgagggcacaggggaggtgaaggagggcttcctg
tgcccgctgtgcctgaaggacctgcagtcgttctaccagctccaggaacactacgaggag
gagcactctggggacgatcgacatgtcaggggacaactcaagagtctggtccagaaggct
aagaaagccaaagacaagctgctgaagagggatggtgaagacaagccagagacgggcagt
tatgagtccttctactacggcggagtggacccttacatgtgggagcctcaggagttggga
gccacaagaaatcatatggacttttttaagaagcacagagctgcccggattgaccactat
gtcatcgaggtcaacaagctcattatcaggctggagaaactgacatcttttgacaggatg
aacatagatgcaggcaaaattagagcgattgagaagtctgttgtggcgtgggtgagcgac
tctgatgttccgttctgtcctgactgcgggaacaagttcaaccttcgcaacaggcgacac
cactgccgcctctgtggctccatcatgtgtaggaagtgcatggagtttgtgcccctgcct
ttggcttacaagctgaccagtgggactcgggaggcccgtagtgttacgggcagccagtcc
cagtcccagtcccctccaacagggggcggaggcaatgtcagcgggatgggctccaggagg
ggcagcatcagcagcctgagcagtgtcacctcaatgctggaagagaaggatgacgagagg
atccgctgctgcctccactgcatggacaccctgatgaagagacagcagaaactggaggag
aaagaccacgtgcctgacattgtcaagctctatgagaggctgagactgtgcatggacaag
gtggatgagagggctccagagtatatcagaatggctgagtctctcaatgctggagagacc
acctataacctggacacggctggtggactgagaatggaagtccagaaatactacgaactg
atcgatgcactgagtaagaagatcttaacactgggaatgaaggaggagccacaaccccat
caaaagactctccagctgcagaggatggtcagatacacagccacactgtttgtccaggag
aagttgctgggtctgatgtctctacccactaaggacaagtatgaggacctaaaggagaag
aggaagcaggagcaggagatgaggctcacgcaggagagactgattgcccaagtggcccag
aaaaggaggcaggactctgagaagaaccgcccagctgccagcaccaatggggaggctccc
caggcccccagggccccccgcatgaccaaagctgggggatggctgccctcttctgatacc
ctccacacgtgcggggagctggaggaccccctgctgcagcagatagacaacatccagtca
ttcttgcggcaggccaaggccgcccagaggcatgacgaagtggccatgctggaggagaac
ctcaggcagctgcaggatgagtacgaccagcaacagaccagcttggccatcgctctgtcc
cagaggctggcgcaggaggagagtctacagcaggacgagctgcaacgcctggaagacaga
gagagggagcacagggcccagagccaagccccaggatcccaggccacatacacctggcag
ggctcactgaacctaaccgatatagggagcctccatggggaggaagagggggaggaagag
gtgacacctaaagcagagagcagccccctgtctatgagggccttccctgccctgaccgac
caggatgaggagtcacccccccggctgaggaggctgcgcggagatgtgacacctcctggt
ggcgagggacagaacagctcctccctcaacccctttgaggaggaggactccacccctgtg
gaggatccttccaatccgttcttcgaggagatccagaaggagcacaaggaggtggctaac
gggaagaaggagtacaacccgtttgagcaggaagagggtggggaggaagagcaggggcag
gcagagggtgctactggcaaccctttcgaagtgaaggaggaaaacaatgaaggtaaccct
tttaaagaggcttctgggtgtaccccgccgggagcctcgaccaatccctttgagggggag
gatgaggaggcgatgccggatgttgacgtgattgaggaggagttgctgctgcagcagatc
gataatatacgggcgtacatatttgatgccaagctcaacgggaggctagacgaggtagag
ctgctatcggagaacctgagagagctgcagcgcacgctacaggaacagaagagcaagaca
cactga
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