Oncorhynchus tshawytscha (Chinook salmon): 112216740
Help
Entry
112216740 CDS
T05605
Name
(RefSeq) nuclear receptor subfamily 1 group D member 1
KO
K03728
nuclear receptor subfamily 1 group D member 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112216740
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112216740
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112216740
Nuclear receptors [BR:
otw03310
]
1. Thyroid hormone like
1D. Rev-Erb
112216740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
112216740
NCBI-ProteinID:
XP_024232552
LinkDB
All DBs
Position
LG02:complement(36845708..36856148)
Genome browser
AA seq
565 aa
AA seq
DB search
MDNSPGGVILYAGSSGSASPSPGSPSSGYQTQSPRSSHSQPSSPEPVSFPEIGPLKRERG
ENRGGPSPKLVFQFPEANATTAATSSGNTYAHPMVAKRPCSFTGTFTKTGGMVLLCKVCG
DIASGFHYGVHACEGCKGFFRRSIQQNIHYKMCVKNESCLIMRMNRNRCQHCRFKKCLYV
GMSRDAVRFGRIPKREKQRLLDEMQSYMNSLNESASMEIDSSPSSSEAPASPEPGESIST
AYRNIFAQEDVKPVIKMVVNSNNIRNNPAHDSGYAHPAPQTHSHSNPSQGYQSHPTQSYQ
TPPRYPRNNNVDNAQYTYQPSSNQSQCPMSNGSQSAQTFQANHNNFSAGESLNQTTCPWK
LSGGAKVLACPLNACPVASRDRSSQQIWDAFSQCFTPAVKEVVEFAKSIPGFQSLSQHDQ
VMLLKAGTFQVLMVRFCSLFDPKEKTVTFLNGQTYPLTSLRALGMGSLLDAMFEFSENLG
SLGLEPDEMALFMAVVLVSADCSGVADVVAVEQLQESLIKALRSLITRRCPDDSALFPKL
LLRLPDLRTLNNMHSDKLLAFSIDP
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggacaacagccctggtggtgtgatactgtatgctggatcatctggtagtgccagcccc
agccctggcagcccctccagcgggtaccagacccagtccccccggtcctcccactcccaa
ccctcatctcctgagcctgtctcgttccccgagatcggccctctgaagagagaaagaggg
gagaacaggggtgggccctcgcccaaactagtcttccagttccctgaagccaatgccact
acagccgctacatcctctggaaacacctacgcccaccctatggtggccaagaggccctgc
agtttcactggcaccttcaccaagacaggaggcatggtgctcctgtgtaaggtgtgtggg
gacatcgcgtctggcttccattacggcgttcacgcctgtgaaggctgcaagggtttcttc
cggcgcagcatccagcagaacatccactacaagatgtgtgtgaagaacgagagctgcctg
atcatgcgcatgaaccgcaaccgctgccagcactgccgcttcaagaagtgtctctacgtg
ggcatgtccagagatgctgtgcgttttgggcgtatcccaaagcgtgaaaagcagaggcta
ttggacgagatgcagagctacatgaatagcctcaacgaatcagcatccatggagattgat
tcctccccttcttcctctgaggccccggccagcccagaacctggcgagtccatttccact
gcctaccgcaacatctttgcccaagaggatgtgaagccagtaatcaagatggtcgtcaac
agcaacaacatccgcaacaatccagcacatgattctggctacgctcaccccgcaccccaa
acccactcccattccaacccctctcaggggtaccagtcacatcccacacaaagctaccag
accccccctcgctacccacgcaacaacaatgttgacaacgcccaatatacctaccaacca
tcatccaatcagagtcaatgcccaatgtccaatggcagccagtctgctcagaccttccaa
gccaatcacaacaacttttcagccggcgagtctctaaaccagaccacatgcccctggaag
ttgagtggaggcgccaaagttctggcatgtcccctgaacgcatgtcccgtggcgtcccgt
gaccgatccagccagcagatctgggacgccttttcccagtgcttcaccccggccgtcaag
gaggtggtggagtttgccaagagcatccccgggttccagagtctcagccagcatgaccag
gtcatgctgcttaaggctggcaccttccaggtgctgatggtcaggttctgctcactgttt
gaccccaaggagaagacggtgaccttcctgaacggccagacataccccctgacatccctg
cgggcgctgggtatgggctctctgctggacgccatgtttgagtttagtgagaacctggga
tctctgggcctggagcccgacgagatggccctcttcatggctgtggtgctagtgtctgcc
gactgttcaggtgtggcggatgtagttgcagtggagcagcttcaggagagtctgatcaaa
gccctgcgctcgctcatcacccgccgctgccccgacgacagcgccctcttccccaagctg
ctgctgcgcctgcccgacctgcgcaccctcaacaacatgcactccgacaagctgctggcc
tttagcatcgacccctaa
DBGET
integrated database retrieval system
