Oncorhynchus tshawytscha (Chinook salmon): 112218370
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Entry
112218370 CDS
T05605
Name
(RefSeq) eukaryotic initiation factor 4A-I
KO
K03257
translation initiation factor 4A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112218370
03012 Translation factors [BR:
otw03012
]
112218370
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112218370
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112218370
mRNA cycle factors
Stress granule specific factors
112218370
Translation factors [BR:
otw03012
]
Eukaryotic type
Initiation factors
eIF-4
112218370
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112218370
Exosomal proteins of bladder cancer cells
112218370
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_30
UvrD-helicase
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
112218370
NCBI-ProteinID:
XP_024234868
LinkDB
All DBs
Position
LG19:complement(11436577..11460803)
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AA seq
409 aa
AA seq
DB search
MSADYEERDLSNRDNGPEGMEPDGIIESNWNEIVDSFDEMALRETLLRGIYAYGFEKPSA
IQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIDIELKGTQALVLAPTRELAQQIQ
KVILALGDYMGASCHACIGGTNVRNEVTKLQAEAPNIVVGTPGRVFDMLNRKFLSAKYIK
MFVLDEADEMLSRGFKDQIYEIFQKLGTSTQVVLLSATMPQDVLEVTKKFMREPIRILVK
KEELTLEGIRQFYINVEKEEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDF
TVSALHGDMDQKERDLIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYI
HRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTTVEEMPMNVADLI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcagattatgaagagagagacctctccaacagagacaatggccctgagggcatg
gagccagatggcatcattgagagtaactggaatgagattgtggacagctttgatgagatg
gccctgcgtgagactctcctgagaggaatctatgcctatggttttgagaaaccatctgcc
attcagcagcgggccatcctcccttgtatcaagggttatgatgtcattgcacaggcccag
tccggcacagggaagactgccacgttcgccatctccatcctccagcagattgatatcgag
ctgaagggcacccaggccctggtcctcgcccccacccgagagctggctcagcagatccag
aaggtgatcctggccctcggcgactacatgggagcctcgtgccatgcctgtattggcgga
acaaacgtccgcaacgaggtgacaaagctccaggctgaggctcccaacatagtggttgga
acaccaggccgcgtgttcgacatgttgaaccgcaagttcctctctgctaagtacatcaag
atgtttgtccttgacgaagctgatgaaatgttgagccggggtttcaaagaccagatctat
gagattttccagaagcttggcactagcacacaggtggttctcctgtctgccactatgcct
caggatgtgctggaggtcaccaagaagttcatgcgtgagcccatccgtatcttggtgaag
aaggaagagctcaccctggagggtatccgccagttctacatcaacgtggagaaagaggag
tggaagctggacaccttgtgtgatctgtatgagaccctgaccatcacccaagctgtgatc
ttcatcaacacccgccgaaaggtggactggctgactgagaagatgcatgccagggacttc
acagtctctgccctgcacggtgacatggaccagaaggagagggacctaatcatgagggag
ttccgctctggctccagccgtgtcctcatcaccacagatctgctggcccgaggaattgat
gtccagcaggtgtctctggttatcaactatgacctgccaaccaatcgtgagaactacatt
cacaggatcgggcgaggaggccgtttcggcaggaagggtgttgccatcaacatggtgact
gaagaggacaaacgcacactccgggacattgagacgttctacaacaccacagtagaagag
atgcccatgaatgtggctgacctgatctag
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