Oncorhynchus tshawytscha (Chinook salmon): 112222961
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Entry
112222961 CDS
T05605
Symbol
nes
Name
(RefSeq) nestin
KO
K07609
nestin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112222961 (nes)
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type VI
112222961 (nes)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TraE
CATRA-C
Motif
Other DBs
NCBI-GeneID:
112222961
NCBI-ProteinID:
XP_042160326
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All DBs
Position
LG23:11984026..11992929
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AA seq
1162 aa
AA seq
DB search
MELHSLRHHHSHRTDDKLQMLNLNQRLETYLGRVRLLEEENKLLCQEIQALRGSGQGGRM
GLDDKLSLARQEVEEVWREKDRVELELGSLGEELHVLGLQRQWEADAHGEVKKKLADSRK
QMEEERRAQIWLGEKVSQLEKQIQFQIKTHQEDVAGFQATLIHVRPALPPPPPQTGTQLP
SLQELGEEYSQMAVRAWHEAAMVFQGQVDSLDESLNQARTRLAQVGQEKNESQLKLQALE
NELQSAQDRRQCLERSVAKQRDMQRQEIQNLQAHLDVLEMEKGALGNQIDTLLTESRGLL
QLKMSLGMEVATYSALLDNESLKGDFSSTNQLRSTYISVGVPSSRGVKQSFQTQLATSHM
IRPISTIHRASPRSNVTMMSASPIWTQNRVTLNETPESCRKTEEHIDFGVGSNHQVSCST
PYLKVPQDGISVHHFRPQDVHIEVNYAEPLSPPTEEAGADVVSLLGSDHKEQSMWDMEKE
EEDQNIVRTWFAEEKPVLESAMSHRVETSFSMPTVFSTDAQELYSPSVSYERAGSVTGAH
SAFSANDDNDVPFEMYFEKEEPLLDMPYGPMNASEERELETAKKDAEWARNEGLESETAS
VLEQAFETFTSSQAFEYGAGKSYNKPIEFNQEDNMSYESTQASHGSEEAFRHVKRLEEDV
IHLPKEDENDMSNKHEEQLEDELHPYGYGNDDCERLGGFIKENDMTERIDKFNQEEIISY
ESAQASHWSEEVFHHVERVEEGDINFTKVDDENDMSNKREEQHALNPNGDVKDEWDRVAG
YNEENGIGERMDDWKEAKYHVKEEEMWNNREAQPNRSDQEYIPSNEEKQNLFEQEQIPSG
REKLNQSEQRYINSNGEKLNQSEQEHIPSGGEKLNQSEPEYITSGGEKQNVNAQEHITTD
GEKMNQSESEYIPSGGEKLNQSEPEYITSGGEKLNLYVQEHIPSDREELNQSEQENIPLG
GQKLNQSEQENIPLGGQKLNQSEQENIPLGGQKLNQFEPEYITSGGEKQNVNAQEHIPTD
GEKMNQSESEYIPSGGEKLNQSEPEYITSGGEKLNLYVQEHIPSDREELNQSEQEDITSG
GEKRNQSEPEYITSGGEKRNQSEQENIPLGGEKRNQSEQEKIPSGGEKLNQSEPEYIISG
GEKLNQSEQKGYNFRRRDTGYM
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggagctccacagcctccgacaccaccacagccaccggactgacgacaagctccagatg
ctgaacctcaaccagcgcctggagacctacctgggccgagtgaggctgctggaggaggag
aacaagctactatgccaggagatccaggccctgaggggcagcggccagggggggcggatg
ggcctggatgacaagctgagcctggccaggcaagaggtagaggaagtctggagggagaag
gatcgggtggagctggagctagggagcctgggtgaagaactccacgtcctggggctgcag
agacagtgggaggcggacgcccatggggaagtgaagaagaagctggcagacagcaggaag
cagatggaggaggagaggagggctcagatctggttaggagagaaggtgagccagctagag
aaacaaatccagttccagataaaaacccaccaggaagatgttgccggcttccaggctaca
ctaatccatgtcagacctgcactgccaccccctccaccccaaacgggcacccagctgccc
agcctccaggagctgggtgaggagtactcccagatggcagtcagggcgtggcatgaggcg
gccatggtgtttcagggccaggtggacagcctggacgagtctctaaaccaggccagaacc
cggttggcccaggtgggccaggagaagaatgagagccagctgaaacttcaggccctggag
aatgagctgcaatcagcccaggatagaaggcagtgtctggagaggagtgtggccaaacag
agagacatgcagaggcaagagatacaaaacctgcaggcccatctggatgtgttggagatg
gagaagggggcgctgggaaatcagattgacactctcctgacagaaagtaggggtctgctg
cagctgaagatgtctctgggcatggaggtggccacatacagcgctttactggacaatgaa
agtctgaagggggatttctcttcaacaaatcagctaaggagtacctacatctctgttgga
gtgcccagctcccgaggggttaagcaaagcttccagacacagctggctaccagtcacatg
atcaggcccatctctaccatccatagagcaagtccacgatccaatgtgacaatgatgtcc
gcatcaccaatctggactcaaaatcgggtaaccctgaatgaaacacctgagagttgtcga
aagacagaagagcatatcgactttggcgtagggtccaaccaccaggtaagttgttcaacg
ccttacctcaaagtaccacaggacggaatttcagtccaccacttcagaccccaagatgtc
catatagaagtcaactatgctgagcctctctcacctcccactgaagaggcaggagctgat
gttgtatctttgcttggatctgaccacaaggaacaatccatgtgggatatggaaaaggag
gaagaggatcagaacatagtcagaacctggtttgctgaagagaaacccgttctggaatct
gccatgagtcaccgggtcgagaccagcttcagtatgccaactgtgttcagcactgatgct
caagagctctacagcccttcagtgagctatgagagagcaggttcggtgacaggggcacat
tctgctttctcagcgaatgatgataatgatgtaccttttgaaatgtattttgaaaaagag
gaacctctactagatatgccttacggtcccatgaatgcatcggaggaaagagagcttgaa
acagcaaagaaagatgctgaatgggcgagaaacgaaggcttggaatctgaaactgcatca
gtgctagagcaagcatttgaaaccttcacaagcagtcaagcttttgagtatggggcgggg
aaaagttacaacaagccaatagagttcaaccaagaggacaatatgtcatatgaatccact
caagcctcccacggttcagaagaggcatttcgccatgttaaaagactggaggaagatgtt
attcatctcccaaaagaggatgaaaatgatatgtctaacaaacatgaggagcaattggaa
gatgaattgcacccctatgggtatggtaacgatgattgtgaaagattgggaggattcatt
aaggaaaatgacatgacagaaagaatcgataagttcaaccaagaggagattatctcatat
gaatctgctcaagcttctcactggtcagaagaggtatttcaccatgttgaaagagtggag
gaaggtgacataaatttcacaaaagtggatgatgaaaatgatatgtctaacaaacgtgag
gaacaacatgcactgaaccccaatggggatgtaaaggatgaatgggatcgagtggcaggg
tacaatgaagagaatggaattggagaaagaatggatgattggaaagaagcaaagtatcat
gtgaaagaggaagagatgtggaataacagagaagcccaacccaatcggtctgatcaagag
tatataccttcaaatgaagagaaacaaaatctattcgagcaagagcaaataccttcaggc
agagagaaactgaatcagtctgagcaaaggtatatcaattcaaacggagagaaactgaat
caatctgagcaagaacatataccttcaggcggagagaaactgaatcaatccgagccagag
tacataacttcaggcggagagaaacagaacgtaaatgcacaagaacacataacaacagac
ggagagaaaatgaatcaatccgagtcagagtatataccttcaggtggagagaaactgaat
caatccgagccagagtacataacttcaggcggagagaaactgaatctatatgtgcaagaa
cacataccctcagacagagaggaactgaatcaatctgaacaagagaatatacctttaggt
ggacagaaactgaatcagtctgaacaagagaatatacctttaggtggacagaaactgaat
cagtctgaacaagagaatatacctttaggtggacagaaactgaatcaattcgagccagag
tacataacttcaggcggagagaaacagaacgtaaatgcacaagaacacataccaacagac
ggagagaaaatgaatcaatccgagtcagagtatataccttcaggtggagagaaactgaat
caatccgagccagagtacataacttcaggcggagagaaactgaatctatatgtgcaagaa
cacataccctcagacagagaggaactgaatcaatctgaacaagaggatataacttcaggc
ggagagaaacggaatcaatccgagccagagtacataacttcaggcggagagaaacggaat
caatccgagcaagagaatatacctttaggtggagagaaacggaatcaatctgaacaagag
aagataccttcaggaggagagaaactgaatcaatctgagccagagtatataatttcaggc
ggagagaaactgaatcaatctgaacaaaaaggatataacttcaggcggcgagacactgga
tatatgtga
DBGET
integrated database retrieval system
