Oncorhynchus tshawytscha (Chinook salmon): 112225227
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Entry
112225227 CDS
T05605
Name
(RefSeq) glutamate decarboxylase 1 isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00250
Alanine, aspartate and glutamate metabolism
otw00410
beta-Alanine metabolism
otw00430
Taurine and hypotaurine metabolism
otw00650
Butanoate metabolism
otw01100
Metabolic pathways
Module
otw_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
112225227
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
112225227
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
112225227
00430 Taurine and hypotaurine metabolism
112225227
Enzymes [BR:
otw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
112225227
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
SepSecS
Chlam_OMP3
Motif
Other DBs
NCBI-GeneID:
112225227
NCBI-ProteinID:
XP_024244737
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Position
LG26:14503617..14520129
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AA seq
592 aa
AA seq
DB search
MESIGVMAASAPSSSGGEPDPNSTNLRPPGTSYDAWCGVAHGCTRKLGMKICGFLQKNNN
LEEKITSFKERSSKDLLDNSDRDSRFRRTETDFSNLFARDLLPAKNGEEPTMQFLLEVVD
ILTNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDQPESLEQILVDCRDTLKYGVRT
GHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREIIGWPDG
EGDGIFSPGGAISNMYSVMTARYKFFPEVKTKGMTAAPRLVLFTSEHSHYSIKKASAALG
FGTENLILLSTDERGRVIPADLEAKVIDAKARGCVPMFVNATAGSTVYGAFDPIHEIADI
CEKYNMWLHVDGAWGGGLLMSRKHRHKLSGVERANSVTWNPHKMMGVPLQCSAILVRERG
VLSGCNSMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTIGFEHHIDK
CLDLSHYLYTKIRDREGYQMVFEGEPQHTNVCFWYLPPGIRDMPDGQERRDRLHKVAPKI
KALMMESGTTMVGYQPQGDKVNFFRMVISNPAATRSDIDFLTDEIERLGHDL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgattggagtgatggcggcgtctgcaccttcctcctctggcggggaaccggat
cccaactcgacaaatttacgaccaccaggcacaagctatgacgcttggtgtggagttgct
catggatgtactagaaaattgggaatgaagatatgtggatttttgcagaagaacaataac
ctcgaggagaagattacttccttcaaggaaagatcgtctaaggacctgcttgataacagc
gacagggattcccgtttcagacgcacggagacggacttttccaatctgtttgctagagat
ttattaccagccaaaaatggagaggagccaaccatgcagttcttgttggaggtggtggat
attctcacaaactacgtccggaagaccttcgacagatccaccaaggtcctggacttccac
cacccccaccagctgctggagggcatggagggcttcaacctggagctgtccgaccagcct
gagtctctggagcagatcctggtggactgcagggataccctgaaatatggagtgagaaca
ggtcacccaaggtttttcaaccagctgtccactggtttagacatcattgggttggcagga
gaatggctcacctccactgcaaacactaacatgttcacctatgagatcgctccagtcttt
gtgctcatggaacagctgacgctgaagaagatgagggagatcattggctggcctgacgga
gagggcgatgggatattctcaccaggtggagcgatttccaatatgtacagtgtgatgacc
gcccgctacaagttcttccctgaagtcaagaccaaaggcatgactgctgcccccagattg
gtgctctttacctcggagcacagtcactactctataaagaaagccagtgctgctctgggc
tttggaacagaaaacctgatcctgttgagcacagatgagagagggagagtcattcctgct
gatttggaagccaaggtcatcgatgccaaggcgcggggttgtgtcccaatgttcgtgaat
gctacagctggttccacagtgtatggagcgttcgaccccatccatgagattgccgacatc
tgcgagaaatacaacatgtggctacatgttgatggtgcatggggaggaggcctactgatg
tccaggaagcacaggcacaagctgagtggcgtggagcgggccaactcagtcacctggaat
cctcacaagatgatgggtgtgccactgcagtgctctgccattctggtcagagagagggga
gttttatcaggctgcaactcaatgtgtgctggctacctcttccaacctgacaaacagtat
gatgtatcgtatgacacgggggataaggccatccagtgtggacgacacgtagatatcttc
aaattctggctcatgtggaaagcaaagggaacaataggatttgaacaccacatcgacaag
tgcttggacctctcgcattatctctatactaaaatcagggaccgtgagggctatcagatg
gtgttcgagggagagccccagcacacgaatgtctgcttctggtaccttccgccaggcatt
cgtgacatgcccgatggtcaagagaggcgggacaggttgcataaggtggcccccaagatc
aaggcgttgatgatggagtctggaactaccatggtgggctaccagcctcagggagacaag
gttaacttcttccgcatggtcatctccaatcctgccgccaccaggtcagatatcgacttc
ttgaccgatgagattgagagactggggcatgacttgtaa
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