Oncorhynchus tshawytscha (Chinook salmon): 112229732
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Entry
112229732 CDS
T05605
Name
(RefSeq) perforin-1 isoform X1
KO
K07818
perforin 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112229732
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Gene cluster
GFIT
Motif
Pfam:
MACPF
C2
Motif
Other DBs
NCBI-GeneID:
112229732
NCBI-ProteinID:
XP_024251496
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Position
LG31:complement(10498529..10501245)
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AA seq
589 aa
AA seq
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MRVMKELCLLLLICWAGTLQCLAESLRGKIPGKPQECEQAEFVPGYNLAGEGFDIVKMQR
KGSYVIDMENWEREGDTCELAVNLCLGGIKQKLPAAMANWRAITDCKRDVSSSIYESSES
LINTTTSAVTNNWKLGLDLEIPQVKFKTIIGGTDSREATYAIAKSKQDRYSFTRHEVHCS
IYRYSLVEDPPLHKQFLNSVKKLPAVYDLNSKVAYRNLIDTYGTHFTSQVNLGGKVSTVT
SIKSCQATMNGVTDTAVKDCLDVEASLSYQSSSSLTSELHYCNDLKKKLGTNRSFSSMFS
DRHSEIKGGVVNGGDLLFSGALDPNAYKEWLESLKTIPDVVHYFLKPLHFLLKSEHPAQP
GLKKAVEEYILENALIKKCSESCQIGTRTSERDQCACVCHSDQSIKSNCCPAGKGLARLQ
VYGLRAKGLYGDISTKTDGFVEISYDKQIKLTEVIKNDDNPVWPESFEFGPIHINFDTKL
TFKVYDTDRALWNKDFLGECSFDLRRGNVSDVCVFTYGTFFFSYTVQCAPSLGGSRCDEY
IPSPMSASLAKVFHSRNGMLAGENWRLELGRNHTNDAVDKVGLNRCPGE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgatgaaggagctgtgtctacttctactgatctgctgggcaggcacactccag
tgcctggcagagagtttgaggggaaagattcctggcaagccacaggaatgtgagcaggcc
gagtttgtccctggttacaacctggcaggggaaggtttcgacattgtgaagatgcagcga
aaaggttcttatgtgatcgacatggaaaattgggagcgggagggagacacttgcgagtta
gctgtcaatttatgtttgggtggaataaaacagaagcttccagcagccatggcaaactgg
agagccatcaccgactgcaagcgggacgtctcaagcagcatctatgaatccagtgagtcc
ctcatcaataccacaacttcagccgtgaccaacaactggaaacttggcctggacctagag
attcctcaagtaaagttcaagacaatcattggagggacagattccagagaagcaacatat
gccattgcaaagtcgaagcaggacagatacagtttcaccaggcatgaagtccattgtagc
atctacagatatagcctggtcgaagatcctcctcttcacaaacaatttctgaattcggtg
aagaagctccccgctgtttatgacctcaattctaaggtggcctatagaaacctgatagac
acatacggcactcatttcacctctcaagtcaacctgggagggaaagtgagcactgtaact
tccatcaagtcttgtcaggcgactatgaacggagtgacagacactgcagtgaaggactgt
cttgatgtcgaggcctccttgtcatatcaatcgagctctagtttgacctccgagcttcac
tactgtaatgatctaaagaagaaacttggcaccaaccgaagtttcagcagcatgttcagt
gaccgccactcggaaattaaaggaggggtagtaaatggaggcgacctgctgttctcaggt
gcgttggacccaaacgcctacaaagagtggctggagtccttgaaaacgatccctgacgtg
gtgcactacttccttaagccccttcacttcctgttgaaaagtgaacatcctgctcaacct
gggctgaagaaagcagtggaggagtacatccttgaaaacgccctgatcaaaaaatgctca
gagtcctgtcagataggtacgaggaccagcgaaagggatcagtgtgcctgtgtctgccac
agtgatcagagcatcaagtccaactgttgtcctgctgggaaaggcctggccaggctgcaa
gtctatggtttgagagcaaagggactatatggggacatatcaaccaaaacggatggtttt
gttgagatctcatatgataaacaaatcaaactcactgaggtgatcaaaaacgacgacaat
cccgtttggccagagagctttgaattcggacccatccatatcaactttgacaccaaactc
actttcaaggtgtatgacacagacagagctctttggaacaaagatttcctgggtgaatgt
tcctttgatctgcgtagaggaaatgtgagtgatgtctgtgtgttcacatatggcacattc
ttcttctcctacacagtgcaatgtgctcccagccttggaggctcacgctgtgacgagtac
atcccctctcctatgagcgcctccctggcaaaagtcttccactccagaaatggcatgctg
gctggggagaattggcgacttgagttgggcaggaatcacaccaatgatgcggttgacaag
gttggcttaaatagatgtcctggtgaataa
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