Oncorhynchus tshawytscha (Chinook salmon): 112233318
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Entry
112233318 CDS
T05605
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-6 beta isoform X1
KO
K09049
cyclic AMP-dependent transcription factor ATF-6 beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04141
Protein processing in endoplasmic reticulum
otw04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112233318
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
112233318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112233318
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
CREB
112233318
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
YabA
bZIP_Maf
DUF6262
Motif
Other DBs
NCBI-GeneID:
112233318
NCBI-ProteinID:
XP_024256635
UniProt:
A0A8C8JXV0
LinkDB
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Position
LG31:8651422..8662626
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AA seq
694 aa
AA seq
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MTTDLLSDLDSRFFADNLLTSEDWDACLYQCESMEEGEDGEYTRRPKYETLFDNDLVLTL
DPDNPTSPWRHLDDNLLTGDSPVLKDKMTITQPLPVDMLFRVKAEPPSPASSLASDCSLT
SLPDSQITVKGENPPTPPYMFGDVLSPPLGTCEVTVASAPQAQPQSHLLPQPQQHQTAAN
NGIDALATVHPTAATIKASTILSSKPPIQPRPVCLSALPIPQSPSPVKALVLHSLPSMDQ
SRPVVLSQSVCLGSTPAIIKMEPVSPTMLHGHSPTAPFPSKPVVQASSLPGSNGIDMKVM
KRQQRMIKNRESACQSRKKKKEYLQNLEGQLREAQQENERLRRENQALRERLVGKEGSES
GNNKRAVCVMAVLLFMTFSFGPVSITDRKLETGLQEDVVTHAGRRLLEFETAQENSRVEE
RMDPEEEEEGGEDGWKGEEVERESTDSYQFRNLSDVFSDVKDLVLQDIDRYFTSNDCRQF
NRSESLRLADELRGWVNRHQIDRKQSGGKPKMVKKAKIAQKALLRKTNFSRYLPIQTHRS
IESQIQVFPAGPKISYSDFMDAIDRREDTFYVVSFRRDHLLLPAISHNKTTRPKMSLVMP
AMSVNESLYNKSHEMMMQVDCEVMDTRIIPIKASDVPPSLRDPPSAPPAHHHHSNHTSLR
GRHHPHTGGAESPRQPLPVRRREAEYYISQGGQV
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgactacggatttactatctgatttggatagtcgtttcttcgctgataaccttctgaca
agcgaagattgggatgcctgtctgtaccagtgcgagagcatggaggagggagaggacggg
gagtacacgagacgaccgaaatatgaaacattgtttgacaacgatctcgtgctgactctt
gatcctgacaatcccacgtcgccatggagacacctggatgacaaccttctcacaggggac
agtcccgtattgaaagataaaatgacgataacgcagcctttgccagtggacatgttgttc
cgggtgaaggcggagcctccctcccctgcctcctcgctggcctcagactgctccctgacg
tcactcccagactcacagatcacagtgaaaggggagaacccgcccacacctccttatatg
tttggagatgtgctgtcgccaccacttggcacatgtgaagtcacggtggcctccgcgcca
caggcccaaccacagtcccatttgctcccacagccacagcaacaccagacagcagccaac
aatggcattgacgcacttgccacagtccaccccactgcggccaccatcaaagccagtacc
atcctgagcagtaagccccccatccagcccaggcctgtgtgtttatcggctctccccatc
ccccagtctcccagtccagtcaaggccctcgtactgcacagcctgcctagcatggaccag
agcaggccagtggtgctttcccagtctgtctgtctggggtccactccagccatcatcaaa
atggagcctgtctctcccaccatgcttcacggccatagccccacagccccattccccagc
aaacccgtagtccaagcgtcctctctgccagggagcaatggcattgatatgaaggtgatg
aagaggcagcagaggatgatcaagaaccgggagtcggcgtgccagtcacgcaagaagaag
aaggagtacctgcagaacctggagggccagctgagggaggcgcagcaggagaacgagcgc
ctccgcagggagaaccaggccctgagggagaggcttgtcgggaaagagggcagtgagtct
ggtaacaataagagggccgtctgcgtcatggcagtgctactgttcatgactttcagtttc
ggccctgtcagtatcacagacaggaagctggagacgggactacaggaagatgtggtgact
cacgcaggaagacgtctcctggagtttgagacggctcaggaaaacagtagagtggaggaa
aggatggatcctgaggaggaggaggagggaggagaggatgggtggaagggagaagaagtg
gagagggaatccaccgattcataccagtttaggaacctgagtgacgtgttcagtgacgtg
aaggatttggtcctgcaggacatcgaccgctatttcacctccaatgactgcaggcagttc
aaccgttccgagtccctcaggctggcggatgagctgagaggatgggttaacaggcaccag
atcgacaggaagcagtctggagggaagccaaagatggtgaaaaaagctaaaatagcgcag
aaagcactgctaaggaagacaaacttctccagatatcttcccatacagacccatcgttcc
atcgagagtcagatacaagtgttccctgccggtcccaagatcagctacagtgacttcatg
gacgccattgaccggcgtgaggacaccttctacgtggtctccttcagacgggatcacctg
ctgttgcctgccatcagccacaacaagaccacacggcccaaaatgtccctggtgatgccg
gctatgtctgtcaacgagagtttatataacaaatcccatgagatgatgatgcaggtggat
tgtgaggtcatggacacccggatcatccccatcaaagcctccgatgttcccccgtccctc
cgcgaccccccttcggctccccccgcccaccatcaccacagcaaccacacctccctccga
ggccgccaccatccccacaccggcggagcggagtctccacggcaacccttacccgtcaga
agacgggaggctgagtattacatcagccaggggggccaggtttga
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