Oncorhynchus tshawytscha (Chinook salmon): 112238637
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Entry
112238637 CDS
T05605
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112238637 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112238637 (trip13)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
112238637 (trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_22
nSTAND3
AAA_18
Viral_helicase1
AAA_14
AAA_24
AAA_25
KAP_NTPase
TIP49
AAA_5
ATPase_2
NACHT
RNA_helicase
AAA_33
ATPase
AAA_28
Cytidylate_kin
RuvB_N
bpMoxR
AAA_17
TsaE
AAA_30
SLFN-g3_helicase
AAA_11
AAA_7
DUF815
IstB_IS21
ABC_tran
Rad17
AAA_19
Mg_chelatase
PduV-EutP
nSTAND1
NB-ARC
AAA_3
PhoH
Sigma54_activat
NTPase_1
Motif
Other DBs
NCBI-GeneID:
112238637
NCBI-ProteinID:
XP_042172542
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MEGDRMEVGDLKQNPNDTNNIHVEVHVKSTSTAKRSDVKMHVLNLLNRHRMVFGAFRWTE
FDEDFLIKHVQSVAIVDAERKPIDLMSCSLSIHIFTLNDDGPSTLNLEEEEELSAANHWL
LPAAEFHGIWESLVYESGVKTQLLDYVSTTIYFSDKNVDSNLISWNRVVLLHGPPGTGKT
SLCKALAQKLSIRLSNRYSYGQFVEINSHSLFSKWFSESGKLVTKMFQKIQQLIDDKQAL
VFVLIDEVESLTAARKASQAGTEPSDAIRVVNSVLTQLDQIKRHPNVVILTTSNVTEKID
LAFVDRADIKQYIGPPSVEGIFNIYLSCLEELMKCQIVSPRQPLLTMFELETMGFRESKV
SELSLVLRDIAIKSKGFSGRALRKLPFLAHALFVKTPTVVLERFLEAMDLAVDKQIEERD
NLVNCL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgacagaatggaggtaggggatctgaagcagaaccccaacgacacgaacaac
atccatgtggaggttcacgtcaaatctaccagcactgccaagaggtctgacgtgaagatg
cacgtcttgaacctgctgaaccgtcatcggatggtgttcggggccttcaggtggacagag
tttgacgaagacttccttatcaaacacgtccaatcagtggccatagtggacgctgagaga
aaacccatagatctgatgagctgcagtctgtccatccacatcttcaccctgaatgatgac
gggcccagcactctgaacctagaggaggaggaggagctctctgcagccaatcactggctc
ttaccagccgctgagttccatggcatctgggagagtctggtctatgagagcggggtcaaa
acacaactcttggattacgtctcaaccacaatttacttctctgacaaaaacgtggacagc
aacctgatctcatggaaccgagttgttctgcttcatggacccccgggcacagggaagacg
tctttgtgtaaagctctggcccagaagctgtcgatccgactatcgaaccggtactcttac
gggcagtttgttgagatcaacagccacagtttgttctccaagtggttctctgagagtggt
aaactggtcactaagatgttccagaagatccaacagctgatagatgacaagcaggctctg
gtgtttgttctcattgatgaggtggagagtctgacggcagcgcggaaagcctcccaggcc
ggaacggaaccctcagatgccatccgagtggtcaactctgtcctcacacagctggaccag
atcaagcggcatcctaatgttgtgatcctgaccacctccaacgtgacagagaagatagac
ctggcgtttgtggacagagctgacatcaagcagtacattggccctccgtctgtagagggc
atcttcaacatctatctgtcctgcctggaggaactgatgaagtgccagatcgtgtccccc
agacagccactgctgaccatgtttgagctggagaccatgggcttcagggagagcaaggtg
tcagagctcagcctggttctcagggacatcgccataaagagtaaaggttttagtggcaga
gcgctgaggaaactaccctttttggcccatgctctttttgtgaagaccccgacagtggtc
ctggagaggttcctggaggccatggacctggcagtggacaaacagatagaggagagggac
aacctggtcaactgtctgtga
DBGET
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