Oncorhynchus tshawytscha (Chinook salmon): 112240164
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Entry
112240164 CDS
T05605
Name
(RefSeq) PR domain zinc finger protein 8-like
KO
K20797
PR domain zinc finger protein 8 [EC:2.1.1.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112240164
03036 Chromosome and associated proteins [BR:
otw03036
]
112240164
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
112240164
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
112240164
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
DUF5810
DUF1835
zf-Di19
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
112240164
NCBI-ProteinID:
XP_024264273
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Position
LG12:7472107..7478155
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AA seq
607 aa
AA seq
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MEESSSQKLVWDGDAKAVQQCLTDIFTSVYTTCDIPENAIFGPCVLSHTSLYDSIAFIAL
KSTDKRTAPYIFRVDTSAANSTSEGLMWLRLVQSARDREEQNLEAYVKNGQLFYRSLRRI
EKDEELLVWYGKDLIELLLLLSAGKAPVKAKGSAPYSCPDCNQRFQFEFPFLAHLRFRCT
KRLQSMAAGDVDEEVPSKEPSTERPNPNLTTTTPTRASPKLGRSEGDNAKPSTDFHNLAR
DLENSRTSPPSDREAEIRSESSGKRKFSEVEDRDRERDRDGSRASLSLSQSLKSKEELAS
SAQNYRGAYGLEENRRGPTFSPPGSVSTESGGEGKRSAFTEVKKSPQSLKTHGNSSTKNL
QSSNAENKDGGRPGPVNNPPQEKHLNIRQVLSETQPVQPQTRMEASPLGSAFTSVAQHGG
GNSGERKSAFSQPSRHATSSFSQISPLVMTTPKLLDCHPAVGDTISSSRLYQADHLAAKL
HGAELSTNCPVPGAMSKQSPFLYAAAAATAFWPKSQGPIQLQMPSALTLLPPSFTSLCLP
AQNWCAKCNASFRMTSDLVYHMRSHHKKELAMEPMVKRRREEKLKCPICNESFRERHHLS
RHMTSHN
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatccagctcacagaagttggtttgggacggcgacgctaaagccgtgcagcag
tgtctaacggatatattcaccagtgtctacaccacatgtgacattccggaaaatgccatt
ttcgggccttgtgttttgagccacacgtcgttgtatgacagcatagccttcatagcgctc
aaatcaacggacaaacgaacggcgccatacatattcagggtggacacctcagcagccaac
agcacgtctgagggcttgatgtggctgcggctcgtgcagtcggcgcgggaccgggaggag
cagaacctcgaggcctacgtgaagaacggtcagctgttctaccggtctctccggaggatc
gagaaggacgaggagctgttggtctggtacgggaaagacctgattgagctgctgctgctg
ctcagcgccggtaaagcgccggtcaaggccaaggggtcggctccctattcgtgtcctgac
tgcaaccagcgctttcaatttgagttccctttcctcgcccacctgaggtttcgctgcacc
aagagactacagagcatggcggcaggcgatgtggacgaggaggtccccagtaaggagcca
agcaccgagcgccctaaccccaaccttacaactaccacacccaccagggcaagccctaaa
ctgggtcgctcggagggggacaacgcgaaaccctccacagacttccataacctagccagg
gacctagagaacagccggactagcccacccagcgaccgcgaggctgagatacgcagtgag
agctctgggaagaggaagttctcagaggtagaggacagggatagagagagggacagggat
ggtagcagggcctctctgagtctgtctcagtccctcaagtctaaggaggagctggctagc
tcggcacagaactaccggggagcctacggcctggaggagaacagacgagggcctacgttc
tccccaccagggtcggtatccactgagtcaggtggtgagggtaaacgcagcgccttcacc
gaggtcaagaagtctccacagagcctaaagacgcacggtaacagcagcaccaaaaacctc
cagagctccaacgccgaaaacaaggacggcggtcggcccggcccggtcaacaaccctccc
caggagaagcatctcaacatcaggcaggttctgtcggagactcagcctgtccagccacag
acccgcatggaggcctctccactagggagcgccttcacctccgtagcccagcatggtggg
gggaacagcggggagaggaagagcgcattcagccaaccctcccgccacgccacctcctcc
ttctcccagatctctcctctggtcatgaccacgcccaaactcctggactgccacccggcg
gtgggcgacaccatctcctcctctagactctaccaggctgaccacctggccgccaaactc
cacggcgccgagctgagcaccaactgccccgtgccgggcgccatgtccaagcagagtccg
ttcctctacgcagcggctgctgccacagccttctggcctaagagccagggccccatccag
ctgcagatgccctcagcattaaccttactccccccctccttcacctctctgtgtctgccc
gcccagaactggtgcgccaagtgcaacgcctccttcaggatgacctctgacctggtgtat
cacatgaggtcgcaccacaagaaggagttggccatggagccgatggttaagaggaggcgt
gaggagaaactcaagtgtccgatctgtaacgagtcgttcagggagaggcaccacctctcg
cgtcacatgacctcccacaactga
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