Oncorhynchus tshawytscha (Chinook salmon): 112242098
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Entry
112242098 CDS
T05605
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
DUF5050
SGL
EGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
112242098
NCBI-ProteinID:
XP_042169875
LinkDB
All DBs
Position
Unknown
AA seq
1122 aa
AA seq
DB search
MRKILISEDLDEPRAIVLDPVAGYMYWTDWGEVPKIERADLDGTERLVMVNTSLGWPNGL
ALDYTDRMIYWGDAKTDKIEVMCMDGSGRRILVEDKLPHIFGFTLLGDYVYWTDWQRRSI
ERVHKYTTEREFIIDQLPDLMGLKATYVHQTFGTNLCAEANGGCSHLCLYKPVGVQCACP
IGLELIADLSTCIVPEAFLLFSRHTDIRRISLETNNNNVAIPLTGVKEASALDFDITDNR
IYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVAKLD
GQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRSAMDGTGRITLVPNVGRANG
LTIDYAERRLYWTDLDTTLIESSNMLGLEREVIADDLPHPFGLTQYQDYIYWTDWSQRSI
ERANKTSGQNRTVIQGHLDYVMDILVFHSSRQGGWNACASTNGQCSHLCLAVPISSFVCG
CPAHFSLNNDNKTCSGERHTHTHTHTSMTVVWSQVGGPNLGLQPFDLSIDIYSRFIYWTS
EVTNVINVTRTDGSRVGVVLRGEHDRPRAIVVNPERGYMYFTNLQERSPKIERAALDGTE
REVLFFSGLGKPVALAIDNEVGKLFWVDSDLRRIESSDLSGANRIVIEDSNILQPVGLTV
FGNHLYWIDRQQQMIERIDKTTREGRTKIQARIASLSDIHAVYDLDMSEYSKHPCTWDNG
GCSHICIVKGDGTTRCSCPVHLVLLQNELSCGEPPTCSPEQFSCVSGEVDCIPHAWRCDG
YPECDDSSDEGDCPVCSDSEFQCDSRQCVDLSLRCNGEVNCQDRSDENKCEVRCSPDHFS
CSSGQCVGKHQKCDHSTDCSDNSDEMGCYPTEEPSSQPTNTIGSIVGVVMALFVVGAIYL
VCQRVLCPQMKDDRETVTNDLVVHGPSVSLGYVPHPASLSGSLPGMSRGKSVIGSLSIMG
GSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATVRSQYTMEFGYSSNSPSTHR
SYSYRPYTYSHFAPPTTPCSTDVCDSDYTPGRRAPPTSNSGIAKGYTSDLNYDSEPFPPP
PTPRSQYLSAEENCESCPLPYTERSYSHHLYPPPPSPCTDSS
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagatcctgatatcagaggacctggacgagccacgagccatcgtactggatcct
gtcgctggatacatgtactggacagactggggcgaggttcctaagattgagcgtgccgac
ctggacgggacggagaggctagtgatggtcaacacctccctgggctggcccaatggtctg
gcgctggactacacagaccggatgatctactggggcgacgccaagacggacaagatagag
gtgatgtgtatggatggttcaggcaggaggatcctggtagaagataagctacctcacatc
tttggcttcactctgctgggggactatgtgtactggacagactggcagagacgcagcatc
gagagggttcacaaatacaccacggagagagagttcatcatagaccagctaccagacctg
atggggctcaaagctacatatgtacaccagaccttcggtaccaacctgtgcgcagaggct
aatggtgggtgtagccacctatgcctgtataagccggtgggcgtccagtgtgcctgtccc
attggtctagagctgatagctgacctgtccacctgcatcgtaccagaagccttcctcctc
ttctcccgacacacagacatcagacgcatctccttggaaacaaacaacaacaacgtggcc
atcccgctgaccggggttaaagaggcgtctgcacttgactttgacatcaccgacaaccgt
atctactggacagatatcacattgaagacaatcagtcgtgcgtttatgaacggcagcgct
ctggaacacgtggtggagtttggcctggactacccagaaggcatggcggtggactggttg
gggaagaatctgtactgggccgacacggggaccaatcgtatcgaggtggccaagctggat
ggacagcacagacaggtcctagtctggaaggatctggacagccctcgagccctggcactg
gaccccgctgaggggtttatgtactggacagagtggggtgggaagcccaagattgaccgc
tcagcgatggacgggacgggtcggatcactctggtgcccaatgtgggccgagccaacggg
ctgaccatcgactatgccgagaggcgactgtactggactgacctggacacgacactcata
gagtcctccaacatgctgggtctggagcgtgaggttatagccgacgacctcccccacccc
tttggtctgacccagtaccaggactacatctattggacggactggtctcagcgcagcatc
gaacgggccaataagacatcgggccagaaccgtacggtcatccagggtcacctagactac
gtgatggacatcttggtcttccactcgtcacgccaggggggctggaacgcctgcgcctcc
accaatgggcaatgctcacacctctgtctggctgtaccaatcagcagctttgtctgtgga
tgccccgcccacttctccctcaacaatgacaacaagacctgcagtggtgagagacacaca
cacacacacacacacacgagtatgacggtggtgtggagccaagtgggcggtcctaacctg
ggcctccagccgtttgacctgagcatcgacatctacagccgcttcatctactggaccagc
gaggtcactaatgtcattaacgtgacgaggacagacggcagccgggtgggagtggtgctg
agaggagaacacgacagacccagagccatcgtggtcaacccagagcgagggtacatgtac
tttaccaacctgcaggagcgcagtcctaagatagaacgagcagcgctcgacgggacagag
agagaggtgttgttcttcagtggcctggggaagcccgttgccctggccatagacaatgag
gtcggcaaactgttctgggtcgactcagacctccgacgcatcgagagcagtgacctatca
ggagccaatcggattgtgattgaggactccaacatcctccagccggttggtctgacggtg
tttggtaaccacctgtactggatcgaccgtcagcagcagatgatcgaacgcattgacaag
acgaccagggagggaaggaccaagatccaggctcgcattgcctctctcagcgacattcac
gctgtctacgacctcgacatgagcgagtacagtaagcacccttgtacctgggacaacgga
ggctgttctcacatctgtatcgtcaagggagacggaaccacacgctgctcctgtcctgtt
catctggtcctgctgcagaatgaactctcctgtggagaaccccccacctgttctccagaa
cagttctcctgtgtatccggggaggtggactgtattccccacgcgtggcggtgtgacggc
tacccagagtgtgatgacagcagcgacgagggagactgtcctgtctgttcagattcagag
tttcagtgtgactccagacagtgtgttgacctcagcctccgctgcaacggagaggtcaac
tgtcaggatcgctcagacgagaacaaatgtgaagtgcgctgctctccggaccacttcagc
tgttctagtggtcagtgtgtggggaaacatcagaagtgtgaccactctacagactgctct
gacaactcggacgagatgggctgctacccgactgaagagccgtcctcccagcccaccaac
accatcggctccattgtgggggttgtcatggcgctgtttgtggtgggcgccatctacttg
gtgtgccagcgcgtgctctgtccccagatgaaggatgacagggagactgtaaccaatgac
ttggtggtccacggcccttctgtttctctgggttatgtacctcaccctgcctctctgtcc
gggtctctgccaggtatgtccagggggaagtctgtgattggttcgttgagcatcatgggc
gggtccagtggccccccttacgaccgcgcccacgtaactggagcctcctcctcaagctcc
tcctccaccaagggcacttacttccccccgatcctgaaccctcctccatctcctgcgacc
gtcaggtctcagtacaccatggagtttggctactcctccaacagcccgtcaacgcaccgt
tcatacagttaccgtccctacacctacagtcacttcgcccctcccacaaccccctgctcc
acggacgtctgcgacagcgactacacccccggacgccgcgccccgcccacctccaactcc
ggcatcgccaaaggttacaccagcgacctgaactacgactccgaacccttccccccaccc
cccaccccccgcagccagtacctgtcagcggaggagaactgtgagagctgccccctcccc
tatacggagcgctcttactctcaccacctctaccccccgcccccatcaccctgcacagac
tcctcctga
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integrated database retrieval system
