Oncorhynchus tshawytscha (Chinook salmon): 112242691
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Entry
112242691 CDS
T05605
Symbol
nyx
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
otw00535
]
112242691 (nyx)
Proteoglycans [BR:
otw00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
112242691 (nyx)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
112242691
NCBI-ProteinID:
XP_024266333
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Position
LG03:69552172..69565320
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AA seq
481 aa
AA seq
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MILIAFTVSVLCLFPQAALALWACARSCPASCTCTLEKSCSVLCDRSGLPDLPREFPCEA
SSINLDKNSLKFLSERAFGTLPSLRSLSLDHNNISFITPGAFKGLPNLVELKMAHNEYIR
YLHTRTFTGLKRLVRLDVADCNLFNMPDRIFLENYALKELFCFQNNFRRIPGAFRGMENL
THVYLERNKIEAVAYNSLLGLGNLRYLNLQENRINVIHDQSFQDLMRLENFYLNDNLLSE
LPRVAFKGLSRLKMLNLGGNQFTNISKTWFSDLVELEVLYLDRNRLVYIEEGSFENLTSL
ITLHLNSNNLSSLPFPVFQPVYFIGRLYLFRNPWECDCSLEYLKEWMESYKLVRDIPCAS
PSSVVGLDLSEVVFARVNGSCLDPGELNLTTMSSEILSTTENRFNSLISKLLQQELREEV
GNGTESLRNGTLLDPAEGLSAGIKGADVSQSLVSLLVMWCVFWMTIGQSDVDFLFGHVTG
T
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgattctcattgctttcacagtctctgtcctgtgcctgtttccccaggctgcgctggct
ctgtgggcgtgcgcacgctcctgcccagcctcttgcacgtgcaccctggagaagagctgc
agtgtgttgtgtgaccgctctggcctacccgacctgccccgggagttcccttgtgaagcg
tcctccatcaacctggacaagaacagccttaagttcctgtctgagagggcctttggtacc
ctgccgtccctcaggtccctgtctctggaccacaacaacatctccttcatcacccctggg
gccttcaagggtctgcccaacctagtggaactgaagatggcccacaacgagtacatccgt
tacctccacacccgcaccttcaccgggctcaaacgcctggtccgactggacgtggccgac
tgtaacctcttcaacatgcccgaccggatctttctagaaaactatgctctgaaggaactg
ttctgcttccagaacaacttccgaaggattcccggagcgttccgcgggatggagaacctg
acccacgtctacctggagcggaacaagatcgaggcagtggcatataactctctcctaggc
ctggggaacctcaggtacctgaacctccaggagaaccgcatcaacgtgatccacgaccag
tcctttcaggacctcatgcgcctggagaacttctacctcaacgacaacctgctgtctgag
ctgcctcgggtggccttcaagggccttagccgcctcaagatgctcaacctggggggcaac
cagttcaccaacatctccaagacctggttcagtgacctggtggagctggaggtcctctac
ctggaccgcaaccgcctggtctatatcgaggagggctcctttgagaacctgaccagtctg
atcaccctccacctcaacagcaacaaccttagttccctgcccttccctgtcttccagcct
gtctacttcatcggacgcctttacctcttcaggaacccctgggaatgtgactgctctctg
gagtatcttaaggagtggatggagagttataagttggtccgggacatcccctgcgcctcc
ccgtcctccgtggtcggcctggatctgagcgaggtagtcttcgccagggtgaatgggtcg
tgcctggatccaggggagctgaacctgaccacaatgtcttcggagatcctctcgaccacg
gagaaccgtttcaacagcctgatctccaagctgctccagcaggagctcagggaagaggtg
gggaatgggacggagagcctgaggaacgggactctgctggaccccgcagagggactcagc
gctgggatcaaaggggcagacgtcagccaatcactggtctcattgttggtgatgtggtgt
gtcttctggatgacaattggccaatcggatgtggatttcctgtttgggcatgtgactggg
acctga
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