Oncorhynchus tshawytscha (Chinook salmon): 112245895
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Entry
112245895 CDS
T05605
Name
(RefSeq) frizzled-6
KO
K02376
frizzled 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04150
mTOR signaling pathway
otw04310
Wnt signaling pathway
otw04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112245895
04150 mTOR signaling pathway
112245895
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
112245895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112245895
G protein-coupled receptors [BR:
otw04030
]
Frizzled / Smoothened family
112245895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Motif
Other DBs
NCBI-GeneID:
112245895
NCBI-ProteinID:
XP_024269836
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All DBs
Position
LG23:complement(20338299..20354010)
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AA seq
711 aa
AA seq
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MIPRLVWVCLALIGARSCHAHSLFTCEPIKVHRCLGMLYNMTFFPNMMAHYDQDIAASRM
EPFMPLVNLRCSPDVHHFLCQAFIPACTEDTKVIQPCRDLCEKVRSDCRKDIGTFGITWP
PELQCDRLEYCLYSPDGSALPPTRLTTPKTSLSAKRDMGFWCPLQLKTRPGQGSTFLGAG
DCAPPCSNMYFKPHEIEFAKTFIGVCSIVCLCATLFTFLTFLIDVKRFRYPERPIIFYAV
CYSFVSLIYFIGFLLGNNASCNKAVHPAAMDTVVLGSQSKGCTLLFMLLYFFSLAGIVWW
VILTITWFLAAGPKWSCEAIEKKAVWFHSAAWGIPGALTVMLLALNKVEGDNISGVCFVG
LYDLDALRYFVLAPLCIGVVVGLSLLLAGIVSLNNVRQVIQHDERNQEKLKKFMIRIGVF
SGLYLVPLVTLQGCYIYEQSQRSTWENTWINDRCQEYSIPCSHKTTESGRPDLSLFLIKY
LMTLVVGISAVFWVSSKKTCSEWAFFFNRTRKKDPISESRRVLQESCEFFLKHNSRVQHK
KNHYNPGSHKLKVISKSMGTSTGASATGNHCTSAVGNHEAIRGQASFSEARGSSDASARE
KLERGSSTRGSRLGERDRERQPSGQALSGGKERAERRSKKGSSSKVSSRSESFHRVPEGR
ITPRSELSEMRQMPSGQHLALSHSHSGSAKGSVPHLVRQLPEEKKEKDNSC
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgatacctaggctggtctgggtgtgcctggcactgataggggcgaggagctgccacgcc
cacagtctgtttacctgtgaacccatcaaggtgcatcgctgcctggggatgctctacaac
atgaccttcttccccaacatgatggcgcactatgaccaggacatagcagccagcaggatg
gagcccttcatgccgttggtcaatctgcgctgctctccagacgtacatcacttcctgtgt
caggcctttatcccagcatgcactgaggacaccaaagtgatccagccatgtcgtgacctg
tgtgagaaagtgaggtcagactgcaggaaggacattggcacctttggcatcacctggcct
ccggagctgcagtgcgacagattggagtattgcctctactctcctgatggctcagccctg
ccaccaaccagactgaccacacccaagacctctctgtctgccaagagggacatgggcttc
tggtgcccccttcagctgaagactcggcccggccagggatccacgttcctgggtgccggg
gactgcgctcccccttgctccaacatgtacttcaagccccatgagatcgagttcgccaag
accttcatcggggtgtgctccatcgtctgcctctgcgccacgctcttcaccttcctcacc
ttcctcatcgacgtcaaacgcttccgctaccccgaacggccaatcatcttctacgccgtg
tgttacagcttcgtgtcgctcatctacttcattggcttcctgctggggaacaatgcatcc
tgcaacaaggcggtgcacccggctgccatggacacggtggtgctgggctcccagagtaaa
ggctgtacgttactcttcatgctactctacttcttctccctggccggcatcgtctggtgg
gtcatcctcaccatcacctggttcctggccgccgggcccaagtggagctgcgaggccatc
gagaagaaggcggtgtggttccactctgccgcctgggggatccccggagcactaactgtc
atgctactggctctcaacaaggtggagggagataacatcagtggggtgtgctttgtgggg
ctctatgatctggatgcgctgcggtactttgtgctggcgccactgtgtatcggggttgtg
gttgggctgtctctgctcctggctgggatcgtgtcgctcaacaacgtgcgtcaggtgatc
cagcacgatgagaggaaccaggagaagctgaagaagtttatgatccgtatcggagtgttc
agtggtctgtacctggtgcccctggtcactctgcaggggtgttatatctatgaacagagc
cagcgctccacctgggaaaacacctggatcaatgaccgttgccaggagtacagcattccc
tgctcacacaagactacagagtctggtcgtccagacctgtccctattcctaattaaatac
ctgatgaccctggtggttgggatctcagctgtgttctgggtcagcagcaagaagacctgc
tcagaatgggccttcttcttcaacaggaccaggaagaaagaccccattagtgagagccga
agagttctccaggagtcctgtgagttcttcctcaaacacaacagccgtgtccagcacaag
aagaaccactacaaccccggctcccacaaactgaaggtcatctccaagtccatgggcacc
agcaccggtgcctcagccacaggcaaccactgcacctcagcagtgggcaaccatgaggcc
atccggggccaggcttctttctctgaggccaggggctcatctgatgcctctgccagggag
aagctggagaggggcagctccacccgtggctccaggctgggggagagggacagggagagg
cagcccagtggacaggccctgtctggagggaaagagagggcagagagacgtagtaagaag
ggcagctccagcaaggttagcagccgctcagagagcttccacagagtcccagagggaagg
ataactcccaggagtgaactatcagagatgagacagatgcccagtggacagcacctggct
ttaagccactcccacagcggtagtgcgaaaggctccgtccctcacctggttcgccagtta
ccagaggagaaaaaggagaaggataacagctgctga
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