Oncorhynchus tshawytscha (Chinook salmon): 112247382
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Entry
112247382 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4 gamma 1
KO
K03260
translation initiation factor 4G
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112247382
03012 Translation factors [BR:
otw03012
]
112247382
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112247382
mRNA cycle factors
Stress granule specific factors
112247382
Translation factors [BR:
otw03012
]
Eukaryotic type
Initiation factors
eIF-4
112247382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
Motif
Other DBs
NCBI-GeneID:
112247382
NCBI-ProteinID:
XP_024271903
LinkDB
All DBs
Position
LG13:complement(73049203..73119254)
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AA seq
1722 aa
AA seq
DB search
MNKAPQPITGPPSATHPAPSPGIQQATFPPGQPPSVVFATPPPQMNPAPQHRQFAPGPRA
LHQQGGFRSLQPYYSRPSLPSNAPRVPPSSTPRPVAPTHVYQPGQQMMMIPSQQIPFPNQ
QGPAYFIPGQYRSTYVATPQQYPVPPGTPGFYPGTSPAEYGTYAGAYYPAQQQYTSSVPA
APVIMNPPPQQQQPPPQQQIHPKRERKQIIIRDPNQGGRDITEEIMSGGTRSGTTPTPPQ
VSDDSSESSISGSEGPAVGQADGENVTPVVVRPDDRGNPAATLITVPPALSKTPELVKTY
PAPTEVKLPDTNSKSPSLSQDLPTPPSVTTTHHTTVPTTPQPSTSPIADMMDAPAAAPAP
SAPEVPAYPAPLPEPRPTPAAEEHPSAAKEEREEVKIKEEVAEARLEVTTSSKPEPSLAP
VITPSSSTNGISATQPPPAKEEEPAALIINMPTPRQQNPRSLPSPSQRSSGCPMACRSPA
PRTLRRCLRSRRSVTSAPLLSLRWLSYRARHLPKLTPVAVTATPAPIVKATPTPVAQATP
APIAQAPPVLAETATTTVVTAPRVEDEMDSPPPQSTTPAGESSMQAAVSVPKKKRKMKDL
NKKEAVGDLLDAFKEEQVVESTPEPEQATPTSASDAKEPRPANTPAVEEVDETWEEKEDK
LDAENIEPKPEDLKYQYKEELCRPIDPEEKKRYDRDFLLGFQFISAAMSKPEGLPQISDV
VLDKANKAPLRQLDPSRLPGMNMGPDFTPSFANLGRPGMGGGGGGHRGGPPSGMGGGGPR
RSQQGQRKEPRRIINISSSLTEDVKLNKAEKAWKPAVKKATSGQAAPEEESDDSEQAKTQ
ELFKRVRSILNKLTPQMFQQLMKQVTELTIDTEERLKGVIDLIFEKAISEPNFSVAYANM
CRCLIGLKVPTTDKPGVTVNFRKLLLNRCQKEFEKDKDDDVIFEKKQKELDAAAMEEKDR
LKAELEEAKDKARRRSLGNIKFIGELFKLKMLTEAIMHDCIVKLLKNHDEESLECLCRLL
STIGKDLDFEKAKPRMDQYFAQMDKIIKEKKTSSRIRFMLQDVLDLRRNTWVPRRGEQGP
KTIDQIHKDAELEEHREVLKVQQQLLNQNTRGGVGGRGGGGRDQGSRGGQHPQTGQRSQP
QDEGWNTVPISTKSRPIDTSRLSKITKPGALDFNNQLLAPQLGGKGMWGSWGKGSSGGTT
GAKPAGEATPESGGRPATSTLNRFSALQPQQPSSSGPSHDSDRRVPQRNSSSRDRGSDRF
ERHDRGSNDRFDRRDDRRDDRDRNRPPVTKRSFSRETEEHSREREHRGPADPVRRVASMT
DDRSSRDRARSKDNVKREAALTPPPAQNKPALSEEMLEKKSTAIIEEYLHINDMKEALQC
VVEMNSTPLLFVFVRSGLESTLERSPIVRERMGLLLHQLYKAGTLPKEQYYRGLQEILEV
AEDMAIDVPHIWLYLAELITPMLHEGGIPMGQLFKEISKPLVPQGTAGVLLVQILTLLCK
GMSHKKAGAMWREAGLSWKDFLPEDEDVNKFVTEKNVEFTLGGGGGGDDETEKSRKKELS
SEELNKQLDRLIQDKADNQRIYDWVEANLDETQMSSNMFVRAVMTSICQSAIICENPYKL
DAKVITRRAKLLHKYLKDEQKELQALYALQALMVEMEQPANLLRMFFDTLYDEDVIKEEA
FNKWESSKDPAEMQGKGVALKSVTAFFTWLREAEDEESDNNS
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaccacagcctataacgggacccccctctgccacccaccctgccccctcc
cccggaatccaacaggccaccttccctcctggacaacccccctctgttgtctttgccacc
ccacctccacaaatgaacccagcaccacagcaccgacagtttgcccccgggccccgtgct
ttacatcaacagggaggattcaggtcactgcagccgtactacagccggcccagtctgccc
agcaatgccccccgggtgccccccagcagcacgccgaggcctgtggcgcccacacacgtc
taccagccgggccaacagatgatgatgatcccctcacagcagatccccttccccaaccaa
cagggccccgcctacttcatacccggacagtaccggtcaacgtacgtggccacccctcag
cagtacccggtcccaccgggcactccaggcttctacccaggcaccagcccagctgaatat
ggtacttatgcaggggcatactacccggcccaacagcagtacacgtcctccgtgccggct
gctccagtcatcatgaaccctcccccccagcagcagcaaccacctccacagcaacagatc
caccccaaaagggagcgcaaacagatcataatacgagaccctaaccagggtggtagagac
atcactgaggagattatgtcagggggcacccgcagtggcaccacccccacacccccacag
gtgagcgacgactcttcagagtcgtctatatctggatcagagggcccagccgttggccag
gccgacggggagaacgtgacacctgtcgtggtcagaccagatgaccgagggaatcctgca
gccactctcataactgtccccccagccctgtctaaaacccctgaactggtcaagacttac
cctgccccaacagaggtcaaactcccagacacaaacagtaaatccccttccttatcccag
gacctacccacacccccgtcggtaactaccacccaccacactactgtccctactaccccc
caaccctcaactagtcctattgcagacatgatggatgctccagccgctgctccagcccca
tctgcccctgaagtgcccgcttaccctgcacccctgcctgaaccccgccccactcctgca
gctgaggagcatccctcagctgccaaggaggagcgggaggaagtgaagattaaagaggag
gtggcggaggctaggctggaggtgactacatcatccaaacctgagccttcccttgctcca
gtgatcacccctagcagcagcactaatggtatctctgccacccagccacccccagccaag
gaggaggagccagcagccctgatcatcaacatgcccacccccaggcagcagaacccccgg
agtctcccatcgcccagccagaggagctcaggctgcccaatggcctgccgctccccagcc
cccaggaccctgagaagatgtctgcggagtcgtcggagtgtgacgtcagccccattgctg
agcctgaggtggctcagttacagagcgaggcacctgcctaaactgacgcctgttgcagtc
acagcaacgcccgccccaattgtcaaggcgacgcccacccccgttgcccaggcgacgccc
gcccccattgcccaggcaccgcctgtcctagctgagactgctactactacagttgtaact
gctccccgtgtagaagacgagatggactcaccaccaccacagagcaccaccccagccggg
gagagttctatgcaagctgctgtttctgtgccaaaaaaaaagaggaagatgaaggatctg
aacaagaaggaggctgttggagacctcctggatgcctttaaggaggagcaggtagtggag
agcactcctgagccagagcaggccacacccacttctgcctctgacgctaaggagccccgc
ccagcaaacacccctgcagtcgaagaggtggatgagacgtgggaggagaaggaggacaaa
ctggatgcagagaatatcgaacccaagccagaggatctgaagtaccagtacaaagaggaa
ctatgtaggcctatagacccagaggagaagaagaggtatgacagggacttcctgctgggc
ttccagttcatcagtgccgccatgtccaagcctgagggcctacctcagatcagtgacgtg
gtgctggacaaggcgaataaggcccctctccgccagctggaccccagccgtttgccaggg
atgaacatgggccccgacttcacaccctcgtttgccaacctgggcaggcctggaatggga
ggaggtggaggtggccacagaggaggaccaccctctggtatgggtggtggaggaccgcgt
cgctcccagcagggccagcgtaaggaacccaggaggatcatcaacatctcttcgtctctg
acagaagacgtgaagctcaacaaggctgagaaggcctggaagcccgctgtcaagaaggct
accagtgggcaagctgctcctgaggaggagagcgacgactcggaacaggccaagacccag
gagctgttcaagagggtccgtagtatcctgaacaagctgacccctcagatgttccaacag
ctgatgaagcaggtcacagagctgaccatcgatacagaggagaggctgaagggagtgata
gatctgatctttgagaaggccatctctgaacccaacttctccgtggcctacgccaacatg
tgccgctgccttattgggctcaaagtccccactacagacaagccgggagtcactgtgaat
ttccgcaagctgcttctgaaccgctgtcagaaggagtttgagaaggacaaggacgatgat
gtaatctttgagaagaagcagaaagagctggacgctgcagccatggaggagaaggatcgc
ctgaaggcagagctggaggaggccaaagacaaggcgcggcggcggtcgctaggcaacatc
aagttcattggtgagctattcaagctgaagatgctgacggaggccatcatgcacgactgc
atcgtcaagctgctgaagaaccacgatgaggagtcactagagtgcctctgtagactcttg
tcaactatagggaaagacctggactttgaaaaggcaaagccacgtatggaccagtacttt
gcccagatggacaagatcatcaaggagaagaagacatcgtccagaatccgcttcatgctg
caggacgtactggacctcaggaggaacacgtgggtccccaggagaggagagcagggcccc
aagaccatagaccagatccacaaggatgctgagctggaggagcacagggaggttctcaag
gtgcagcagcaactcctcaaccagaacacccgaggaggagttggaggacgtggtggtgga
ggaagagatcaggggagccgcgggggccaacacccccagacgggccaaaggagtcagccc
caggacgagggctggaacacagttcccatctccaccaagagcagacccatcgacaccagc
cgactcagcaagatcactaagcccggggctttggacttcaacaaccagctgctggcgccc
cagctcgggggtaaaggcatgtggggcagctggggcaagggcagcagtggaggcaccacc
ggagccaaacccgctggtgaagccaccccagagtcaggaggccgcccagccaccagcacc
ctcaacaggttctcagcattgcagccacagcagccctcctcctcagggccctcacatgac
tcggacagaagagttcctcagaggaacagctcgagccgggaccgtggcagcgacagattc
gagcgtcatgaccgtggcagcaacgaccgcttcgacaggcgggatgaccggcgagacgac
cgggacaggaaccggcccccagtcaccaagcggagctttagcagggagacggaggagcac
agcagagagagggagcaccgcggccctgctgatcctgtacgccgtgtagccagcatgacc
gatgaccggagcagcagagaccgagccaggagcaaagacaatgtgaagagggaagctgct
ctgaccccccctcctgcccagaacaaacctgccttgagtgaagaaatgctggaaaagaag
tccacagctatcatagaggagtacctacacatcaacgacatgaaggaggcgctgcagtgt
gtagtggagatgaacagcaccccgctgctctttgtgtttgtacggagtggtctagagtcc
actctggagcgcagccccatcgtcagagaacgcatgggcctgctgctgcaccagctgtac
aaggcagggaccctgcccaaagagcagtactacagagggcttcaagagatactggaggtg
gcggaggacatggccatagacgtcccccacatctggctctacctggctgagcttatcacc
cctatgcttcacgaaggaggcatccccatgggacagctcttcaaggagatatccaagccc
ctggttcctcaggggacggctggagttctgctggtccagatcctcaccttactctgcaaa
ggaatgagccataaaaaggcaggtgccatgtggagggaggcggggcttagctggaaagac
tttctgcctgaggacgaggacgtcaacaagtttgtgacagaaaagaatgtggagttcacc
ctgggaggaggaggagggggagatgatgagacagagaagagcagaaagaaagagctgagc
tcagaggagctgaacaaacagctggacagactcatacaggacaaggctgacaaccagagg
atctatgattgggtcgaggctaacctggacgagacgcagatgtcctccaacatgtttgtc
agagcagtcatgacatccatctgccagtcagccatcatctgtgagaacccttacaagttg
gatgcgaaggtgatcacccggagggccaagctgctccacaagtacctgaaggatgagcag
aaggagctgcaggctctctacgccttgcaggccctcatggtggagatggagcagcctgcc
aacctgctgcggatgttctttgacacgctgtatgatgaggacgtgatcaaagaagaggcc
ttcaacaagtgggagtccagcaaggaccccgcagagatgcagggtaagggtgtggccctg
aagtccgtcaccgccttcttcacctggctccgtgaggccgaggacgaggagtctgacaac
aacagctag
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integrated database retrieval system
