Oncorhynchus tshawytscha (Chinook salmon): 112248229
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Entry
112248229 CDS
T05605
Name
(RefSeq) snRNA-activating protein complex subunit 4-like
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
SLIDE
SocA_Panacea
Motif
Other DBs
NCBI-GeneID:
112248229
NCBI-ProteinID:
XP_024272851
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Position
LG04:complement(17441027..17468894)
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AA seq
1375 aa
AA seq
DB search
MSSDDLLAQRERIERQILALEENLGLESNSGIELLSSDSCASDDGSDDNASQPEDLGSLG
NLEAERERIQREIEELESTLGPDVDGQGSSTELSEEDSAEELDLPQNTDTCLQINLVYQE
VLKEKLEYLEQLLTDNQQQQKEIMSQLSDTGTPQATTSGEPTLKLFLGSFLKPYFRDKVT
FLGPPANPETREKMSKRIRPTDDVKMKKWEGWQKTLLINAVVKDSMKRMIQPKLSKVEYL
TQKMAKAEDVEKLILRKQITEIEKDIEAISALKEDELMGGRYDDHDWQKISNIDFEGIRE
AEDIKSFWQNYLHPSINKASWKEDEIEMLKKVAVKYGHHNWDQIADKLGTNRTAFMCLQT
YQRYICTDFKRRMWCGVEDDILRELVEKMRIGNYIPYTQISYFMEGRDSCQLMYRWTQVL
DPTLRKGHWSKEEDEMLLRAVAKHGAGNWWKMRQDVPGRNDSQCRDRYVDVLIGNVKKGP
FDEEERAQLRQLVEKYGCKWAKIAAEMPNRIDSQVLQQWRRMTGYKPRPRRDRSRRELQR
RKAVAVRSIKSRLKRLDNDVHSSADEEESVKMEFMDSDDEKKQKFFELYGSDQESDIFED
YTQPDMEQWIPMREKQFEGMVRSVMVERPSKYTTQEQAATDSQAAARKFMVVRSTVLDRF
GEPAATVIGQNPPILAKKDCNSDLAMLQVCYGEVRNLITWKKTNATKHKNSESTSSDQGT
PHNCSRQKYSSANSETYTTLNYSLQLAVTPWVGNVLMPPPISSNKLREADMVREKSESIG
LTKTPVFLFFLQVLRVDAEGCKQIIQMRNKQAVLTGHRSWEAKQALLKKTMQRHGPRMVA
SMLKRKGNEQQNSQQQNSQLVMMIPQTFVIGQPVVQSTPHPMVPFTPTSRQQLMPSTLTQ
PGPSTPSRPIPSTPGQPLPSTPSQPILPAPVQSSIIIDRVNVQVNENLSAKKRNLKPTVK
SQAPKEVKDAAIAKKSVEQSPKRKKARTQSPPKGNLVGQLSNIILSPPQTAWVLTRDGLV
PISGIGIQMTPQNLPANAFAPACPPVIINQQVPLTLNAAAAQASSNVTNVCPSSSASSIA
QGTASPSVFSSPSASTTFISNTAPRMTNPVLPTVATTCPQLNAVSPVLSVPKNTVISAPI
RPQTGPPQAFVLNVPPGSLPASFPQGAFRIMQFYPPKRVPPPRNPEVIQFDPNLIFMEDP
AKVSEWLNGKNGIALPELDVTLPYLPPFVSSLDTLSSLLKCKTTLAISAMMVLHPEEKEN
QEEEQQVAAVRSLVAERFIHNPGYLLLKARFLSCFTMPALLATINPVKFPMSPTPEHSDV
EEEPFRNPPGMQIYTLNEQQTTLQAPLLSTDGTGSPATFFSGITTRNKSWDLDME
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggatgaccttcttgcacagagagagagaatcgaacgccagattttggcgctg
gaggaaaaccttggactcgaaagcaattccggcattgaacttctatcttcagacagttgt
gcatctgatgatggatcagacgacaatgcttctcaaccagaagatttgggttctctgggg
aacctggaggcagagcgggagcgaatacagagggagattgaagagttggagtccactctt
ggtccagatgtggatggccaaggaagttcaacagaattgagcgaagaggacagtgctgag
gagctggacctaccccagaacacagatacatgtctgcaaattaacctggtttatcaggaa
gtgttgaaagagaaattggagtacctggaacaactgttaacagacaatcaacagcaacaa
aaagagattatgtctcagctatctgacacaggaactccccaggctaccacatctggagaa
cccacactgaagcttttcttggggagctttctgaagccctatttcagagataaagtcaca
tttctgggcccacccgctaatccagaaaccagggagaagatgagtaaaagaatcagacct
actgacgacgtcaagatgaaaaaatgggaggggtggcagaagactctgctgataaatgct
gtggtcaaagacagcatgaaacgcatgatacagcccaagctgtccaaggttgaatacctt
acacagaaaatggccaaagctgaagacgtggaaaagctaatcctgcggaaacaaatcact
gaaattgaaaaggacattgaggccatcagtgcactgaaggaggatgagctgatgggtggc
cgctatgatgaccatgactggcaaaagatttccaatattgattttgaaggcatccgtgaa
gctgaggacataaaaagcttctggcagaactacctgcatccctccattaacaaagccagt
tggaaggaagatgaaattgagatgctcaagaaagttgctgtgaaatatgggcaccacaac
tgggatcagattgctgataaacttgggaccaacaggacagccttcatgtgtctccagaca
taccaacgctacatctgcaccgacttcaagaggaggatgtggtgtggagtggaggacgac
atccttagagagctggtggagaagatgcggatagggaactacatcccttacacccagatc
tcctatttcatggagggccgggattcatgccagctgatgtatcggtggactcaggttctg
gaccccaccctcaggaaaggccattggtctaaagaagaagatgagatgctactgagagca
gtggctaaacacggggcggggaactggtggaagatgcgtcaggatgtgcctggcagaaat
gatagccagtgtagggacaggtatgtggacgtcctgattgggaacgtgaagaaggggcca
tttgacgaggaggaacgggcgcaactccgacaattggtggagaaatatggatgtaaatgg
gcaaagatagctgctgaaatgcctaacagaattgacagccaggtccttcaacagtggagg
agaatgacagggtacaagcccagacctcggagagacagaagtagaagagaattgcagagg
agaaaggcagtggctgtgaggagcatcaagagtaggctgaagaggctagacaatgatgtg
cactcaagcgccgatgaagaggagagcgtcaagatggaatttatggacagtgacgacgag
aagaaacagaaattctttgaactgtacggatctgatcaggaaagtgacatttttgaagac
tacacccaaccagacatggagcaatggatccccatgcgagagaagcagtttgaagggatg
gtgaggagtgtgatggttgaacggcccagcaagtacacaactcaagagcaggcagcgacg
gacagccaggccgcagcacgcaagttcatggtggtccgctccaccgtcctggaccgcttt
ggcgagcctgctgccactgtcattggacaaaaccctccaatcctggcaaagaaggattgc
aacagtgacctggccatgctccaggtatgctatggagaggtgaggaacctgatcacttgg
aagaaaacaaatgccacaaaacataaaaacagtgagtctacaagcagtgaccaggggacg
cctcacaattgctcaaggcaaaagtactcctctgccaacagtgaaacctacaccactctc
aactattcccttcagttggcagtcactccctgggtgggcaatgtgcttatgcccccacca
atctcttcaaacaagctcagagaagctgacatggtgcgagagaaatctgagagcattgga
ctcaccaagaccccagtgttcttgttctttctgcaggtcctccgtgtggatgctgagggc
tgtaagcagataattcaaatgcgtaacaaacaagcggtactcacgggacacagatcttgg
gaagcgaaacaggctttattgaaaaaaacaatgcaacggcatggtcccagaatggtagcc
agtatgctgaaacggaagggaaacgagcagcagaacagccagcaacagaacagtcaactt
gtgatgatgatccctcagacctttgtcattggacagcctgtagtacagtccaccccacat
cctatggtcccattcactccaacttccagacaacaactcatgccttctacacttacccaa
cccggaccctctacccccagccgacccataccttccacccctggtcaacctttaccctca
acccccagccaacctatactccctgctcctgtgcaatcctcaatcataatagacagggtg
aatgttcaggtaaatgagaatctttcagcaaagaaacgcaatctcaaacctactgtgaaa
tcacaggcccccaaagaggtcaaggatgctgcaattgcaaaaaagtcagtggaacagtcg
cctaaacgcaagaaagcccgtacgcaaagtcctcccaaaggaaacctggttggccaactt
tctaacataattctgtcccctccacaaactgcctgggtcctgacgcgcgatggacttgtg
ccaatcagtggcattggcattcagatgacacctcagaatctaccagcaaatgcttttgca
cctgcttgtccacctgttattatcaaccagcaagtccctctaacactaaatgctgctgca
gcacaggcctcctccaatgtgaccaatgtctgcccatcttcctctgcatcatccatagca
cagggaactgcctccccatctgttttctcctctccctccgcctccactaccttcataagc
aacactgctccaaggatgaccaacccagtcctgccgactgtggcaaccacttgtccccag
ctcaatgcagtgtcacctgttctctctgttcccaagaacacggtcatctcggctcccatt
agaccacagactggcccgccacaggctttcgtcctcaacgtccctccaggctctcttcca
gcctcattccctcagggagccttccgaatcatgcagttttatccccctaaacgtgtccct
ccaccccgcaatccagaagtaatacagtttgatcccaacctgatattcatggaggaccca
gccaaagtgagcgagtggttgaatggcaagaatggaattgcgcttccggagttggatgtc
acactaccctaccttcccccctttgtcagcagcctggataccctgtcgagtctcctgaaa
tgtaaaacgacattggcaattagtgccatgatggtcctgcacccagaggagaaagagaac
caggaagaggagcagcaggtagcggcagtgcggagcctcgtggcagagcgtttcatccat
aacccgggctacctcctcctgaaggctcgcttcttgtcttgtttcaccatgcctgctctt
ctggctactatcaatccagtcaaattccccatgtctcccaccccggaacacagtgatgtg
gaggaggaacctttcaggaaccccccagggatgcagatctatactttgaatgaacagcaa
acaacactccaggcccctctgctaagcactgatggaacaggatctcctgccaccttcttc
tccggaatcaccacaagaaataaaagctgggacctagacatggagtaa
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