Oncorhynchus tshawytscha (Chinook salmon): 112248355
Help
Entry
112248355 CDS
T05605
Name
(RefSeq) sarcoplasmic/endoplasmic reticulum calcium ATPase 2 isoform X1
KO
K05853
P-type Ca2+ transporter type 2A [EC:
7.2.2.10
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04020
Calcium signaling pathway
otw04148
Efferocytosis
otw04260
Cardiac muscle contraction
otw04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112248355
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112248355
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
112248355
04261 Adrenergic signaling in cardiomyocytes
112248355
Enzymes [BR:
otw01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.10 P-type Ca2+ transporter
112248355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1-E2_ATPase
Cation_ATPase_C
Cation_ATPase
Cation_ATPase_N
Hydrolase
Hydrolase_3
HAD
Motif
Other DBs
NCBI-GeneID:
112248355
NCBI-ProteinID:
XP_024273074
LinkDB
All DBs
Position
LG04:23271616..23305192
Genome browser
AA seq
1042 aa
AA seq
DB search
MDNAHTKSVEEVYSDFSVNESTGLGLDQVKRQKEKWGSNELPAEEGKSLWELVVEQFEDL
LVRILLLAACISFVLALFEDGEETITAFVEPFVILLILIANAIVGVWQERNAEDAIEALK
EYEPEMGKVYRQDRKTVQRIKAKEIVPGDIVEVAVGDKVPADIRLTSIKSTTLRVDQSIL
TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNISSGKAIGVVVATGVNTEIGKIRDEMA
ATEQEKTPLQQKLDEFGEQLSKVISLICIAVWMINIGHFNDPVHGGSWIRGAVYYFKIAV
ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ
MSVCRMFIIDQADGNSCSLNEFTITGSTYAPEGEVYQDGRLVKSSAYDGLVEIATICALC
NDSSLDFNEAKGVYEKVGEATETALTCLVEKMNAFDTDVKGLTKIDRANACNSVIMQLMK
KEFTLEFSRDRKSMSVYCTPNKARSSLGKMFVKGAPEGVIDRCTHVRVGTCKVAMTPGIK
ERIMSTIRGYGTGRDTLRCLALATRDTPPRKEDMVLVDCARFVDYEADLTFVGCVGMLDP
PRTEVAASIKLCRLAGIRVIMITGDNKGTAVAICHRIGILGEEDDVDKMAFTGREFDDLS
LQAQRDAVINARCFARVEPSHKSKIVEFLQAMDEITAMTGDGVNDAPALKKAEIGIAMGS
GTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG
FPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRSAKEPLISGWLFFRYLAIGC
YVGAATVGAATWWFVAAEDGPMISLYQLSHFLQCSPDNPDFSDLECHVFESPYPMTMALS
VLVTIEMCNALNSLSENQSLLRMPPWENIWLLGAICLSMSLHFLILYVEPLPVIFQITPL
DLTQWLVVLKISLPVILLDELLKFVARNYLEPGNQPESKSASKGWSLSACTEGISWPFVG
ITLPLVLWLYSIDTNVSALFWS
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggataacgctcacacaaagagtgttgaagaagtttatagcgatttttctgtcaacgaa
agcacaggacttggtttggaccaggtgaaacgtcagaaggagaaatggggctcgaacgag
ctacctgctgaagaagggaagtctctatgggagcttgttgttgaacagtttgaagattta
cttgtaagaattcttctgctggcagcttgtatatcttttgtcttggccttattcgaggat
ggagaagaaacaatcacagcctttgtggagccttttgtaatcttactcattcttatagcc
aatgccatagtgggtgtgtggcaggaacgcaatgctgaggatgccattgaagcccttaaa
gagtacgagcctgagatgggcaaggtctaccgccaggacaggaagactgttcagaggatc
aaggccaaagaaatcgtgcctggagacatcgtggaggttgctgttggagacaaggttcct
gcagacatccgtcttacatccatcaaatctacaaccctgagagtagatcagtccatcctg
accggtgagtcggtctctgtcatcaagcacacggacccagtgcctgaccctcgagctgtc
aaccaggacaagaagaacatgctcttctccggcaccaacatctcgtctggcaaggctatt
ggtgtggtggtggccacgggcgtgaacactgagattggtaagatccgtgatgagatggca
gccactgagcaggagaagacccccctgcagcagaagctggatgagttcggggagcagctg
tccaaggtcatctccctgatctgcatcgctgtgtggatgatcaacatcggccacttcaac
gaccctgtccacggaggctcctggatccgcggcgccgtctactacttcaagatcgccgtg
gccctggctgtggccgccatccctgagggtctgcctgctgtcatcaccacctgcctggcc
ttgggcacccgccgcatggccaagaagaacgccatcgtccgcagcctgccctctgtggag
accctggggtgcacctctgtcatctgctccgacaagaccggcaccctcaccaccaaccag
atgtctgtctgcaggatgttcatcattgaccaggccgacgggaacagttgctctctgaat
gagttcaccatcactggctctacttacgcacctgaaggagaagtgtaccaggatggcaga
ctagtgaagtcctctgcgtatgatggtctagtggagattgccaccatctgtgccctgtgc
aatgactcctctctagacttcaatgaggccaaaggtgtgtatgagaaggttggcgaggct
acagagacggctctcacctgcctggtggagaagatgaatgcgtttgacaccgatgtcaaa
ggcctgaccaagatcgacagggccaacgcctgcaactctgtgatcatgcaactgatgaag
aaggaattcaccctggagttctccagagacaggaagtccatgtctgtgtactgcaccccc
aacaaggcccgctcctcacttggaaagatgtttgtcaagggtgcccccgagggagttatt
gacagatgtactcatgtcagagtgggcacctgcaaggttgccatgaccccaggaatcaaa
gagaggatcatgtctacgatccgtgggtacgggactgggcgtgacaccctgcgctgcctg
gctctggccacccgggacaccccacccaggaaggaggacatggtgctggttgattgtgcc
cgcttcgttgattatgaggctgacctgaccttcgtgggctgcgttggcatgctggaccct
cccaggaccgaggtggctgcctccatcaagctgtgtcgcctagccggcatccgcgtcatc
atgatcaccggcgacaacaagggcactgccgtggccatctgccaccgtatcggcatcctg
ggtgaggaagacgacgtggacaaaatggcgttcactggccgcgagtttgacgacctgtcc
cttcaggcccaacgcgatgctgttatcaacgcccgctgcttcgcccgtgtcgagccctcc
cacaagtccaagatcgttgagttcctgcaggccatggacgagatcacagccatgacgggt
gatggagtgaacgatgctcctgccttgaagaaggcagagattggaatcgccatgggctct
ggcactgccgtggccaagtcagcctctgagatggtcctggccgatgacaacttttcttcc
atcgtggcggctgtggaggagggcagggccatctacaacaacatgaaacagttcatccgc
tacctcatctcctccaatgtgggagaggtcgtctgtatcttcctgacggctgctctgggc
ttccctgaggctctgatccccgttcagctgctgtgggtcaacctggtgacagatggtctc
cctgccaccgcactgggcttcaaccccccagacctggacatcatgaacaagcccccccgc
agtgcaaaggagcccctcatctccggatggctcttcttcagatacctggccatcggctgc
tatgtgggagctgccacagtgggagccgctacctggtggttcgtggctgctgaggatggc
cctatgatctctctgtaccagctgagccacttcctgcagtgttcccctgacaaccctgac
ttctcagacctggagtgtcatgtgtttgagtccccctaccccatgaccatggccctgtct
gtgcttgtcaccattgagatgtgcaatgcccttaacagcctgtcagagaaccagtccctg
ctgcgtatgcctccctgggagaacatctggctgctgggggccatctgcctctccatgtcc
ctccacttcctcatcctctatgtggagccactgcccgtcatcttccagatcacccctctg
gacctgacccagtggctggtggtgctgaagatctccctgcccgtcatcctgctggatgag
ctgctaaagttcgtggccaggaactacctggaacccggtaaccagccagagtctaagtca
gccagcaaaggctggtccctctctgcatgcacagagggcatctcctggccctttgtgggc
atcaccctccccctggtgctgtggctctacagcatcgacactaacgtgtctgccctgttc
tggtcctga
DBGET
integrated database retrieval system
