Oncorhynchus tshawytscha (Chinook salmon): 112248372
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Entry
112248372 CDS
T05605
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B-A-like isoform X1
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00310
Lysine degradation
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112248372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112248372
Enzymes [BR:
otw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
112248372
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
112248372
HMT complexes
COMPASS/SET1 complex
112248372
COMPASS/SET1 complex (yeast)
112248372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
N-SET
RRM_1
DUF6172
BUD22
EspG
Motif
Other DBs
NCBI-GeneID:
112248372
NCBI-ProteinID:
XP_042176440
LinkDB
All DBs
Position
LG04:24255563..24269905
Genome browser
AA seq
1785 aa
AA seq
DB search
MEINHQVNHGEKHPQHWRSCKLIVDPALNNGFYKVYRYDGHHFNMPVQDLGAFPVDTVRD
PRICRLWTKFRDTDLLVPKFKIDECYVGPPKEVTFARLNDNVREGFLTDMCIKYGQIEEV
EILYNPKNKKHLGIAKVIFDTVKAAKDTVEHLHDTSVMGNIIHVELDPKGKNRMRYFHLL
VSGLYTPSTLPLGSDEHTLQRLTERLQDSKPLQKLTDGSSSLTRSISSPTSVATPLSLDT
AYSSIWQDTPGSFGQTPLSQGTPHTPCLSGTPLSQDSCYSSQHTTPVQVTQGEHSSYGAH
RRLRRDVCYRQPGRPYMKSHHQSSELSSLLKHLQPHRPLQPQTQVASGSYKSSVFWYQNR
LPSADDNPATEPPLHLSLPEQESWRVPSLPPASEAFPLSSSSASATSMNVVPLRERPQSP
PSGPDAGLIEPPPSPPNNSPGSLIPEAESHSLDSRIEMLLSKTQSSCLPRHGERGLDAEV
HSQDSPVSPFSPVSMYSPESDHTPARSGSPVNCTHPTTSDGLEDVSPTPLPEWEGDESLP
VMPSLIWTSQPPWPPGTRSLTQRERSKGTEMDHADQSTSSEKYMGRALHSLSFSQGLHLS
GEDKDISNAGQSGMSNLKSHCSRSITVNSFIPSLRQPLPISSLNHPAPIPPYSPHSSVPS
SNPPPSITHSNLPIRFSPSNPHPQIHPSIHPISAPLSIPIPPPGFHLLPPHIPPPLTILG
PPPNMAAPPSILHPVYPYPLNTLHTVHMDKVNGLPGCGSVPVSFTGQPWPLPPFMPTFNP
SVPPPGYLPLQEDPHKATVEKVLAVITEELKSIVKRDINRKMVEGVAFRAFDEWWDGQEQ
KAKIAVSLVNSREGRVEVRAKPRDSLRQNIGPRGATNLPSFKVKKKESDESTASEDPKRK
CPYTPVNDAHESAELESNITNHTLDRSPKTGTIPALRRRHARPLELDSEGEEESREKEGE
PTRDKEEDTVEADKVPQCQQRDENDDIEQKEEEVDEDEDDDEDDDEDDDEDVVFSKVTRG
LQSPNEEVARVSLSEVESYSSEDSEYLSESDSSDSSFEESEDFSDYDSSSDQETEEEEET
DEDADEVNREVECVVLSSDEEEMDLEPPATPSAPLTPGTELDLLDGSELVLRDQPWEVCL
TRDVFGRTSCTSRPDPGMELLSSEHHHDLQAPSPIGLPAVVEPDFAVEIDSPEWSVESPD
NVENLRPLTPTGSLGDSDSDLLFKSKPTPPAVEEVELPHTPGRGAEALLESEEDSMDHLL
SFSPTDSEPLSQSRPTHPPALASYPTYEDMPKTPGRDERGLWNPLTPWRVAVTPGRESGL
TEGGPGFSPTPCNPFPLPSLCTGLYIRTPQTPGRDFIPTKRTHRNTTVMLASSQRTNGAP
LSCDEMLTDAPVLASSPSSLSESSAETSGHGYVWLNPNPGSQRKLTLQGLENWSGLVDVE
NQREMEKCSWRRVQPRMRRKMRRKMRRRMRRWQRMRSVQRAMPSVFSASPCRRSRSEEMT
VLHSVWKEGLDEEDSKLLQVTYDRLLQQDNGFSWLSDTLWVPHPLTRVLTEKRKELNDWM
WDHVTGSARSEGFYKISKNDKIKYLNSTCLNTDQPSADTQGVGLSSQPHPSLRSGSEFRS
EQRRLLSSFSCDSDLLRFNQLKFRKKRIRFCRSHIHDWGLFALEPIAADEMVIEYVGQCI
RQVIADMREKRYEDEGIGSSYLFRVDQDTIIDATKYGNLARFINHSCNPNCYAKIITVKS
QKKIVIYSRQPISVNEEITYDYKFPIEDEKIPCLCGAENCQGSLN
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaccatcaggtaaatcacggagaaaaacatcctcagcactggaggagctgc
aaattgatcgtagaccctgcgttgaataatgggttttataaagtgtatcgttacgatggg
catcatttcaacatgccagttcaggacttaggggcatttcctgtggatactgtccgggat
cccagaatctgtcgtctttggaccaaattcagagacactgacctgctggtccccaaattt
aagattgatgaatgctatgtcggcccacccaaggaagtgacatttgccaggttaaatgac
aacgtaagggagggtttcttgactgacatgtgcataaagtacggacagattgaggaagtg
gaaatcttgtataatcctaaaaacaagaagcatttaggaattgctaaagtcatcttcgac
acagtcaaggctgcaaaggacactgtggaacaccttcatgacacttctgtcatggggaac
attatccacgtggaacttgatccaaagggtaaaaacagaatgcggtacttccatcttctt
gttagtggactctacaccccttcgacattgccactgggcagtgatgagcacaccctccaa
cgcctaactgagagattgcaggacagcaaacctctgcagaaactgactgatgggagttca
tcattgacaaggtctatttccagtcccaccagcgtggctacacctctctccctagacaca
gcctactccagtatctggcaggacacaccgggcagctttgggcagacacccctctctcag
ggcacccctcataccccctgcctgtctgggacccccctctctcaggactcttgctactct
agccagcacaccaccccagtccaagtcactcagggtgaacactcctcatacggtgctcac
agacgcttgaggcgcgatgtctgctatcgtcaaccagggagaccttatatgaaatcccac
catcagagctcagagctgagctctctcctcaaacacctccaacctcaccgtcctctccag
ccccaaacccaggttgctagcggcagctacaaatcttccgtcttctggtatcagaaccgc
ctgccctcggctgatgataaccctgccacagagcctcccctccacctctcccttcctgaa
caggagtcctggagagtgccctctctacctcctgcctctgaggctttccctctgagcagc
agctctgccagtgccacaagtatgaacgtggtacctctgagggagagaccccagtctccc
ccttctggacccgatgcgggccttatagaaccgcccccttcccctcccaataactctcct
ggaagcctcattccagaggcagagagccacagcctggactcacgcattgagatgcttctc
agcaagactcagagttcctgcctccctcgacatggtgaaaggggtttggatgctgaagtg
cactctcaggacagccctgtttccccattctcccctgtctcgatgtactctcctgagtct
gaccacaccccagcccgtagtggatctcctgtgaactgtacccaccccaccaccagtgat
ggtctggaggatgtcagtcccactcccctccctgagtgggaaggagacgagtcccttcca
gtgatgccttctctaatatggacctcacagcccccctggcctcctgggacgcgctctctc
actcaaagggagagaagtaaaggaacagagatggaccatgcagatcagtcaacctctagt
gaaaagtatatgggacgggcactccattccttatcattttctcagggtctccatttgtca
ggggaagacaaggacatctcaaatgcgggacaatctggaatgtcgaatctcaaaagccat
tgttccaggagcatcacagtcaactccttcattccctccttgcgacaacctcttccaatc
tcctcgctcaatcacccagctccaatccctccctacagtcctcactcttcagttccctct
tccaatcctcccccatcaatcacccactccaacctccccattcgattctctccctccaac
cctcaccctcaaatccacccttctatccatcccatttctgctcctctttctattccaatc
ccacctccaggattccatctgcttcctccacacattcctccccctctcactatccttggg
cctcctccaaatatggcagcccctccctctatcctacatccagtttacccatatcccttg
aatacactgcacactgtgcatatggacaaggtgaatggtcttcctgggtgtggcagtgtg
ccagtgtcttttactgggcaaccctggcccctgcctcccttcatgcccaccttcaacccc
tctgtgcccccgccaggctacctgcctctgcaggaggaccctcataaggccacagtggaa
aaggtgctggctgtcattacggaggagcttaagtccatcgtgaagagagacatcaaccgt
aaaatggttgagggggtagccttcagggcgtttgatgagtggtgggatggccaggagcag
aaagctaagattgctgtaagtcttgtgaattccagagagggtagagtggaggtgagggcc
aaaccaagagactccctaagacagaacattggcccgcgtggtgccaccaacctgccttcc
ttcaaggtaaagaagaaagagtccgacgaatcgactgcctcagaggaccccaaaagaaag
tgtccctacacacctgttaatgatgcacatgagagtgctgagctggagagtaatataacg
aatcacacattggacaggtccccaaaaactggaactattccagctttgaggcgaagacat
gcaaggccactggagctggacagtgagggggaagaggagagcagagagaaagagggggag
ccaacaagagacaaagaagaggatactgtggaagcagacaaggttccccaatgccagcag
agggatgaaaatgatgacattgaacaaaaagaggaagaagtggacgaggatgaagatgat
gatgaagatgatgatgaagatgatgatgaagatgtggtcttctctaaagttacaagagga
ttacagtctccaaatgaggaagttgccagggtaagcctctcagaggtagagtcttactcc
tcagaagacagtgaatacctctcagagtctgactcctctgactcctcctttgaggaaagt
gaagacttctcagactatgactccagttctgaccaggagacagaggaagaggaggagaca
gacgaagatgctgatgaggtcaacagggaggtagagtgtgtggtgttgtcatcagatgag
gaggagatggatctggagcccccggccacaccctcagcccctcttaccccaggcacagag
ctggacctactggatgggtcagagctggtcctgagggatcagccttgggaggtctgtctg
actcgagatgtctttgggcgcaccagctgcacaagccgacctgacccagggatggagctc
ctgtccagtgagcaccaccatgatctccaggccccctcacccataggactgccagcagtg
gtggagcctgactttgcagtggagatagatagccctgaatggagcgttgagtcaccagat
aacgtggagaacctccggcctctcacccccactggctctctgggggacagcgactcagac
ctactgttcaagagcaaaccaaccccccctgctgtggaggaggtggaactgccacacact
cctggtcggggagcagaggccctccttgagagtgaggaggactctatggaccacctcctc
tccttttcccccacagacagtgagcctttgtcccagagccgccccactcatccccctgcc
ttagcctcgtacccaacatacgaggacatgcccaaaacaccagggagagatgagaggggt
ctatggaatccccttaccccctggagggtggcagtgacaccgggcagagagtcaggcctc
acagagggaggcccagggtttagtcccactccctgtaaccctttccccctcccctccctg
tgcaccggcctctacatcaggaccccacaaactcctgggagggacttcatcccaaccaag
agaacacacaggaataccaccgttatgttggcctcttcacagaggactaatggtgctcct
ttatcctgtgatgaaatgcttacagacgcacctgttttagcttcttctcctagcagcctg
tctgagtcatcagcagagacttctggccatgggtatgtgtggcttaatcctaatcctggg
tcccagaggaagttaaccctgcagggcctggagaactggtcagggctggtggatgtggag
aaccagagagagatggagaagtgctcctggaggagggtacaaccaagaatgaggcggaag
atgaggcggaagatgaggcggaggatgaggcgatggcaaaggatgaggtcagtgcagaga
gccatgccctctgtcttctcggccagtccctgtcgtcggtcacgaagtgaggagatgact
gtcctccacagtgtctggaaggagggcctggatgaggaggattccaagctgctgcaggtc
acctatgacaggctgctacagcaggacaatggcttcagctggctcagtgacactctctgg
gtcccccaccctctcaccagagtcttgacggagaagaggaaggagctcaatgattggatg
tgggaccatgtgacaggatctgcccgcagcgagggcttttacaaaatcagcaagaatgac
aaaataaaatacctcaacagcacgtgtttgaatacagaccagccctctgcagacacccag
ggggtaggtctttcaagccagccgcacccttccctgcggtctgggtctgagttcaggtct
gaacaacgccgtctgctctcctccttcagctgtgacagtgacctgctcaggtttaaccag
cttaagttccgcaagaagaggattcgtttctgccgcagtcacatccatgactggggcctg
tttgccctggagcccatagcagcagatgagatggtgattgagtatgtgggccagtgcatc
agacaggtgattgcagatatgcgggagaagcgctatgaagatgaggggattgggagcagc
tacctgttccgggtcgatcaggataccatcatcgacgccactaaatatgggaacttggcc
agatttatcaaccacagctgcaatcctaattgctatgcaaaaataatcacagtgaaatcc
cagaagaagatagtgatctactcccggcagcccatcagtgtcaatgaggagatcacgtat
gattacaagttccccatcgaggatgagaagattccctgtctgtgtggagcagagaactgc
cagggctccctcaactga
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integrated database retrieval system
