Oncorhynchus tshawytscha (Chinook salmon): 112248480
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Entry
112248480 CDS
T05605
Name
(RefSeq) PDZ and LIM domain protein 2
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112248480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112248480
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
112248480
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Gene cluster
GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
Ogr_Delta
Motif
Other DBs
NCBI-GeneID:
112248480
NCBI-ProteinID:
XP_024273309
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Position
LG04:complement(28468676..28529263)
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AA seq
371 aa
AA seq
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MALTVNLIGPSPWGFRIYGGRDFKKVITVSKVNGGSKAELAALQPGDVILEINGENTVDM
LNVEAQNKIKNSKTQLQMLVERPEPPIPEQTNGTTTPEQLTGRFQEAVLVSRDENQNYRG
YSISSPASLSPGLYSPEAPSSPEGKRERLTPTGTKSIQLRSWSPEEKTSSHRLSRPLSQE
FSSPDFRTNSVTSRTPTPPGHYSPHSPIDRELSVSPRRSSGSDFAMQRFDRDSEVYKMIQ
ENKESRTAPRQSNTFHMLQEVLEADEKEATVRFPGLSPKPTPPKPTSPGGGVPKYHTCEK
CGTSIVTQAVRIMHDRFRHPECYTCSTPECGLNLKMRGHFWVGEEMFCEKHARENYQGLG
TAPCATVSPRH
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacagtaaacctgattggtccgtctccatggggctttagaatatacggagga
agagacttcaagaaggtgataacagtttccaaggtcaatgggggcagcaaggccgagttg
gccgccctgcagcctggtgatgtcatcctggagatcaatggagagaacacagtggacatg
ctcaatgtggaggcccagaacaagatcaaaaactccaaaactcagctgcagatgctggtg
gagaggcctgagccccccatccctgaacagaccaatggaaccaccaccccagaacagctc
actggacgcttccaggaggcggtgctggtgagtcgagatgagaaccagaactacagaggg
tactccatctccagcccagcctctctgtcacctggactctactccccagaggctccgtcc
agtcctgagggaaagagagagaggctcacacccaccggcaccaagagcatccagctgcgt
tcgtggtctccagaagagaagacatcgagtcacagactgtccagaccactgtcacaggag
ttctcttctccggacttcaggactaactctgtgaccagtcgaacccccacccctccagga
cattactcgccccacagccctattgaccgcgagctgtctgtctcccccagacgcagttct
ggctcggactttgccatgcagcggtttgaccgggattcagaggtctacaagatgatccag
gagaacaaggagtctcgcacggcccctcgacagtccaacaccttccacatgctgcaggag
gttctggaggccgatgagaaggaggcaactgtgcggtttccaggactctcgcccaaaccc
acccctcccaaacccacatcacccgggggcggagtccccaagtaccacacctgtgagaag
tgtggcaccagcattgttacacaggcggtgcgcatcatgcacgaccgcttccgccaccca
gagtgctacacctgttctacaccagagtgcggactcaacctgaagatgcgaggtcacttc
tgggtgggagaggagatgttctgtgagaagcatgcccgcgagaattaccagggccttggc
actgccccctgtgccaccgtctcaccccgccactga
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