Oncorhynchus tshawytscha (Chinook salmon): 112256244
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Entry
112256244 CDS
T05605
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-2-like
KO
K04813
nicotinic acetylcholine receptor beta-2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112256244
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112256244
Ion channels [BR:
otw04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
112256244
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
DUF4537
DUF1286
Motif
Other DBs
NCBI-GeneID:
112256244
NCBI-ProteinID:
XP_042181623
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Position
LG08:57901417..57922381
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AA seq
505 aa
AA seq
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MADPVTAALALLVLTLATALGAEIEERLVTHLLSPERYNKLIRPAVNKSQQVTIHIQVSL
AQLINVNEREQIMTTNCWLTQVWNDYRLVWDPEEYEGIKKVRLPSQHIWLPDIVLYNNAD
GNYEVSFYSNALVSNNGEVYWLPPAIYKSACKIEVRDFPFDQQNCTLKFRSWTYDHTEID
LILLSDFASRDDFKPSGEWDIVSLPGRKNEDPSDITYLDITYDFIIKRKPLFYTINLIIP
CVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLAVPLIGKYLMFA
MVLVTFSIVTSVCVLNVHHRTPSTHTMPRWVKRLFLHRLPSFLFMRRPGSSNIRERFRQK
HQRRSYSDLKLRDGAVAVAAGGMGVAGGSGMGSADSFYVNEESAKRYGWKISDLSENTEF
RKRMTVKCHADVEDAVDGVRYVAEKMKIEDNDEGVIEDWKYVAMVIDRLFLWIFVFVCIT
GTLGLFMQPLFQSYNTPTADDLEQN
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcagacccggtgacagcagcgctcgctctcctggttctcaccttggcaactgccttg
ggtgcggagatagaggagcgactggtgacccacctgctgtctccagagcgctacaacaaa
ctgatcagacctgctgtcaacaagagccaacaggtcaccatccatatacaggtgtcccta
gcccagctcattaatgtgaatgaaagagaacagatcatgaccaccaactgctggctgact
caggtatggaatgactacaggttggtgtgggacccagaagagtatgagggcattaagaag
gttcgcctcccatctcaacacatctggctgcctgacatcgtcctctacaacaatgcggat
gggaactacgaggtgtcattctactccaacgcattggtctccaacaatggagaggtgtac
tggctgccccccgccatctacaagtcagcctgcaagatcgaggtccgcgacttccccttc
gaccagcagaactgcacgctcaagttccggtcctggacctacgaccacacggagatcgac
ctgatcctgctcagcgacttcgccagccgcgacgacttcaagcccagcggcgagtgggac
atcgtgtctctgccgggacgcaagaacgaagacccctctgacatcacctacctggacatc
acctatgacttcatcatcaagcgcaagccactgttctacaccatcaacctcatcatcccc
tgtgtgctgatcacctctctggccatcctggtgttctacctgccgtctgactgtggagag
aagatgactctctgtatctcggtcctcctggccctcactgtgttcctgctgctgatctcc
aagatcgttccgcctacgtccctggctgtccctctcatagggaagtatctgatgtttgcc
atggtgctggtcaccttctccatcgtcaccagtgtgtgtgtgctcaacgtgcaccaccgc
acgccctccacacacaccatgccccgctgggttaaacgcctcttcctgcaccgcctcccc
tccttcctgttcatgcgtcggccgggcagctccaacatccgggagaggttccgccagaag
caccagcggcgttcctactccgacctgaagctgcgagacggggcggtggcggtggccgcg
ggggggatgggggtggcaggggggtctgggatgggcagcgctgactccttctatgtgaac
gaggagtcggccaagcggtacggctggaagatcagtgacctgtcagagaatacagagttc
aggaagaggatgacggtgaagtgtcacgcagatgtggaggatgcagtggacggggtgcgc
tacgtcgccgagaagatgaagatcgaggataacgatgagggggtcatcgaggattggaag
tacgttgccatggtgatagaccggctgttcctgtggatatttgtgtttgtgtgcatcacc
gggacgttggggctgttcatgcagcccctctttcagagctacaacacacccacggcagat
gacctggagcagaactga
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