Oncorhynchus tshawytscha (Chinook salmon): 112256874
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Entry
112256874 CDS
T05605
Name
(RefSeq) synaptosomal-associated protein 23
KO
K08508
synaptosomal-associated protein 23
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112256874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112256874
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112256874
Membrane trafficking [BR:
otw04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-23
112256874
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112256874
Exosomal proteins of other body fluids (saliva and urine)
112256874
Exosomal proteins of colorectal cancer cells
112256874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNAP-25
DUF5089
V-SNARE_C
RmuC
ArsA_ATPase
COG6_N
Sec20
Motif
Other DBs
NCBI-GeneID:
112256874
NCBI-ProteinID:
XP_024286199
LinkDB
All DBs
Position
LG08:complement(14279899..14299678)
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AA seq
213 aa
AA seq
DB search
MADMSAEEITMRANQVTDESLECTRRMLQMAEETRETGVNTIDMLDQQGEQLRRTEEGMD
QINEDMRKAEKNLTDLSKCCGLCVCPCDRVTSIEHDSKYKRTWGTGDGTGEGGDGSVVSR
QPSGIHNGQANQQQPMGGSGPYIKRITNDAREDEMEENLDQVGSIIGNLKNMARDMGSEL
DKQNKHIDCITEKADRNKARINEANQRANKLLK
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggcggatatgtcagcggaagagatcaccatgagggccaaccaagtgaccgatgagtcc
ttggagtgcaccaggcggatgctacagatggccgaggagaccagggagactggtgtcaac
accatcgacatgctggaccaacagggggagcaactgagacgtacagaggagggtatggac
cagatcaacgaggacatgaggaaggctgagaagaacctgactgacctgtccaagtgctgt
ggcctctgtgtctgcccctgtgacagggtgacatccatagagcatgactctaagtacaag
cgtacctggggaacaggtgatggtacaggagagggaggggatggctcggtggtgtccagg
caaccctcgggcatccataacggacaagccaaccagcagcagcccatggggggctctgga
ccctacatcaagaggattaccaacgatgctcgggaggatgagatggaggagaacctggat
caggtgggcagcatcatagggaacctgaagaacatggccagagacatgggctctgagcta
gacaagcagaacaaacacatcgactgcatcacagaaaaggcggacagaaacaaagcacgt
atcaatgaagccaaccagcgagccaacaagctcctcaagtag
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