KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112259488
Entry
112259488         CDS       T05605                                 
Name
(RefSeq) AF4/FMR2 family member 1 isoform X1
  KO
K15184  AF4/FMR2 family member 1
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:otw03021]
    112259488
Transcription machinery [BR:otw03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     112259488
SSDB
Motif
Pfam: AFF4_CHD AF-4 AF4_int
Other DBs
NCBI-GeneID: 112259488
NCBI-ProteinID: XP_042182377
LinkDB
Position
LG09:complement(8166192..8234738)
AA seq 1160 aa
MAARSSYNEERNLLRIQERERRNQGTFQEKEFYQETVPLFGEPYKTNKGDELSSRIQRML
GSYEDVNNPNTHQCLDSSFSKEPQSHVTTKYGRPSRSRDRAKPPFQNPPQYGASQSQSGG
PPRGSHSGQPLKKIHGPSSSYTQSSLSLSQGQACPDPHQGKTELWPDLRECASLPPVLSA
LSPPADPLSPLHSSDPSDSEHQDSPLHPERHPASPLHPDSHFPMVSPLDDPQRDIPPPAI
DGATLPSQTFPPPLASKPNLVMPQKPTAYVRPMDGQDQVTSESPDLKPSPEDFHGQSYHE
PLPDLKSTKPSLSKLKIPSQSIETLSHEADCVEDILREMTHSWPPLLTAIQTPSTVEPSK
FSFPVKEAQHVPPASPGQKHYGSPPLAPPSICQQSSCTVTAAHSSGVESASSSDSESSSG
SESGSESSESGTEAPPQPLRSSSPPVTKAEGPVVTNWQLNNWIRVSQQNPSTESQSDALL
SPLPKQQQSHEEEAIPPRDYKSHTPPRRSEFSDGEAKPQRSEEAAHNQHVQHKSPAASHV
GNSSNSSQRKTVGNKHPSRPAKAPRPEDPQAGLQVESVEVVPRDKDTSFTDKPKVKTKTG
HSNSKISGAKTNSRKPAKRGTSEKKTEQPESQSGPKVTLVLDCKREKSPSPSPAQEVDQP
APAVVKTIGVRTETLPAPQKGQKKPRRHSLDPAHKAKRESSAKASRVCQGPPRALLVKIE
LSLLSRVPSQGSRPSSGGQEPAIRKGPNTAPERGDTNPAAPIPTKVCKKRPAEKDVKTVP
RKKPKLQKDLKPSTSGPGSRKSETERKRSKGAPVPLLQPTTTQDPGKGQGGHKRHAVDAP
EPSTASAAHRRDREASTPAKHRKSTEKQRTEHAKKGLKSSVAFSVPSQPTGTALSSRPLL
QFEERQQPVEYHMKEAKTLKHKADATPDKVGKAFNYLDAAMSFVESGIAMETDPQTPKSA
CTMFAETLDLIKFILKLKGSVNPSAPATDKDFTVLCMRGLSLLQMAMFRYKREAALKYSR
TLTDHFKSSIKSATQAPSPCVSKSTGTPSPMSPMPSPASTASSGPGSNHSSGAGSGTVST
VAIPQVIQQVASSYVNITALFLSAHDIWEQADELAHKGSGLLSELDLALGPLSLTSTMSS
LVRHTRQGLQWLRLDTREAQ
NT seq 3483 nt   +upstreamnt  +downstreamnt
atggcagctcgttcaagctacaatgaggagaggaacctccttcgtatccaagagcgggag
cggcgcaatcagggaaccttccaggaaaaggagttctaccaggagaccgttcccctgttc
ggggaaccctataagacgaacaaaggagatgagctgtccagccgtatccagaggatgctg
ggtagttatgaggatgtgaacaatcccaacactcaccagtgtttggacagcagcttctct
aaggagcctcaatctcatgtcaccacaaagtatgggcggccatctcgcagccgagaccga
gcgaagcctccattccagaaccctcctcagtacggggcaagccagagccagagtggtggt
ccgccccgtggtagccactctggccagcctctgaagaagatccacggtccttcctcctcc
tacacccagtcctccctgagtctcagccagggccaggcctgcccagacccacaccaggga
aagactgagctctggccagacctgagggagtgtgccagtcttcctccagtcctctccgcc
ctgtcacccccagccgatcccctatcccccctacattccagtgaccccagcgactctgaa
caccaggactcccccctgcaccctgagaggcacccggcctctcccctacaccccgactca
cacttccccatggtgtcccccctggatgacccccagagagacatcccgcctccggccatc
gatggggcaaccctaccctctcagaccttccctccaccactggcctccaaacccaacctg
gttatgccccagaagccaacagcctacgtccggcccatggacggccaagaccaggtgacc
agcgagtctccggacctcaagccctctccagaagactttcatgggcagtcttatcatgaa
cccttaccagacttgaaaagcaccaagcccagcctttccaaactgaagataccatcacag
tctatagagacgctgtcacatgaagctgactgtgtggaagacattctgagggaaatgacc
cactcctggcctcctctcctgactgccatccagacgcccagcacagttgagccctccaag
ttctccttcccagtcaaggaagcacagcatgtcccacctgcgtctccaggacaaaaacac
tatggatcacctccactagccccgccctccatctgtcaacagagctcatgtacggttaca
gcagcacattccagtggggtggagtcagccagctccagtgactctgagagcagctccggg
tcggagtcaggcagtgagagcagtgagagtgggacagaggcccccccacagcccctcagg
agtagtagcccacctgtgacaaaggcggagggccccgtggtgactaactggcagttgaac
aactggatcagagtgagccagcagaaccccagcacagagagccagagtgacgctctactg
agccctctacccaaacagcagcagagccatgaggaggaggccattcctcccagggactac
aaatcccacacacccccacgtcgctcagagttcagtgacggcgaagccaaacctcaacgc
agtgaagaagctgcccacaaccagcatgtccaacacaagtccccggccgcctcgcacgtt
gggaacagcagcaacagcagccagagaaagacagtggggaacaaacacccctccagacca
gccaaggctccccgacctgaagaccctcaggctgggttacaggtggagagtgtggaggtg
gtcccccgtgacaaagacacctcgttcacagacaagccaaaggtcaaaacgaaaactggc
cacagcaatagcaagatcagcggagccaaaacaaacagcaggaagcctgccaagcgtggc
acctctgagaagaagaccgaacaaccagagtcacagagtggccccaaggtgactctggtg
ctggactgtaagcgggagaagtctcctagtcccagtcctgcccaggaggtagaccagcca
gccccagctgtggtgaagaccatcggtgtcaggacggagaccctcccggcccctcagaag
ggccaaaagaagccccggcgccactctctagacccagcacacaaggccaagcgggagtcc
tcagccaaagcttccagggtctgccaaggtcctccacgagccctgctggtaaagatagaa
ttgagcctgctgtccagggttccctcccagggctccaggccttcttcagggggccaggag
ccagccatcaggaagggacccaacacggccccagagaggggggacaccaaccccgctgcc
cccatccctaccaaagtctgcaagaagagaccggctgagaaggatgtgaaaactgtgcca
aggaagaagccaaagctgcagaaagatcttaaaccctccacttcaggtcctggttcccgc
aagtctgagactgagaggaagcggtctaagggggctcctgtccctctgctgcagcccacc
accactcaggaccctgggaaagggcaggggggccacaaacggcatgcggtggatgcccca
gagcctagcacagcatctgcagcccaccgcagggacagggaggcctccacacctgccaag
cacaggaagagcactgaaaaacaacgcacagagcatgccaagaaaggcctcaagagcagt
gttgccttctccgtgccttctcagcccaccgggaccgccctgtcctccagacccctgctc
cagttcgaagagaggcagcagccagtggagtatcacatgaaggaagccaaaacactcaag
cacaaggcagatgccacgccggataaggtgggcaaagctttcaactacctagatgctgcc
atgtccttcgtggagagcggcatcgctatggaaaccgatccccagaccccgaagtcggca
tgtacgatgttcgctgaaaccttggatctgatcaagttcatactgaaactaaagggctct
gtgaacccctcggctcctgctacagacaaggactttacagttttatgcatgaggggcctg
tcccttctacagatggccatgtttcgctacaaacgagaagcagcacttaagtattcaagg
accctgacagatcatttcaagagttctataaagtctgcaacccaggctccttcaccatgt
gtctcaaaaagcacaggtaccccatcccccatgtctcccatgccgtctcctgccagcaca
gccagttctgggccgggctccaaccacagcagcggggcggggtcaggcaccgtcagcacc
gtggccattccacaggtcatccagcaggtggcgtcttcctacgtcaacatcacggcactc
ttcctgagtgctcacgacatctgggagcaggctgacgagctggcccacaaaggcagtggt
ttgctgtctgagttggacttggctctgggcccgttgagcctgacgtccaccatgagctct
ttggtgcgtcacacacggcagggactgcagtggctccgactggacacccgtgaggcacag
tga

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