Oncorhynchus tshawytscha (Chinook salmon): 112263912
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Entry
112263912 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: patatin-like phospholipase domain-containing protein 6
KO
K14676
lysophospholipid hydrolase [EC:
3.1.1.5
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
112263912
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.5 lysophospholipase
112263912
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Patatin
MscL
STE2
LapA_dom
Motif
Other DBs
NCBI-GeneID:
112263912
NCBI-ProteinID:
XP_042159480
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All DBs
Position
LG02:complement(67685701..67724358)
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AA seq
1360 aa
AA seq
DB search
MGQSTSEQEGQEHADAPLEEGFNNIKAFVEEELQTSMMMGMVIGAGIAIILIAILIFFML
RRIQLRNLQAQEAPKYRFRKRDKVMFYGRKIMRKVSQSTSSLVGTASSSRPRLKKKQKML
NIAKKILRFKKEVPTLVAKEPPPSVLEADLTEFDVANSHLPSEVLYMLKNVRVLGHFEKP
LFLELCKHMVFLQFQQGEYVFRPGQPDSSIYVVQDGKLELCLTGMDGKDGVVKEVYPGDS
VHSLLSILDVITGHQKPYKTVSARAAEVSTVLSLPVEAFLSIFEKYPESLVRVVQIIMVR
LQRVTVLALHNYLGLTNELFSHEMQLLRLLPLSPHPVPRTSPQRHGKRFGSLTVPAEDRE
AAVKDASDPGKDGATVPPTLSRTISMPVDIAGMQKNLRSDFDMAYERGRISVSAEDGNTP
PTYTRDQRERRVTVDEVPSGVYLYPEEEGGPDNQFSPGPGPVPGRPSPALFEEALKELLK
LMRIEDPALLNGRVTLHHAKAGTVLARQGDQDVSLHFILSGCLHVYQRMIDKQDAVCLFV
TQPGEMVGQLAVLTGEPLIFTIKANRDCTFLKISKSDFYEIMREQPSVVLSAAHTVAIRM
SPFVRQMDFAIDWMAVEAGRALYRQEDQSDCTYIVLNGRLRSVIRKANGKKELVGEYGRG
DLIGVVEALTRQPRATTVHAVRDTELVKLPEGTLNNIKRRYPQVVTRLIHLLGQKILGNL
QQARGPFSGSALGRSSVASSPDVTNPASNLSTVAVLPICDEVPINAFNLELSHALSAIGP
ALLLTSDIIRERLGASALDSIHEYRLSGWLAQQEDINRIVLYQTDSSMTPWTQRCIRQAD
CILIVGLGEQEPALGQLEQMLENTAVRALKQLVLLHKEDGSGPSRTVEWLNMRSWCSGHL
HLRCPRRVFSRRSPSKLREVYEKVFEKTADRHSDFSRLARVLTGNSIAVVLGGGGARGCS
HVGVIKAMEEAGIPIDIVGGTSIGSFIGALYAEERSAVRTKQRAREWSKAMNSVFKTILD
LTYPITSMFTGAAFNTSISKVFQDKQAEDLWLPYFNVTTDITASAMRVHQDGSLWRYVRA
SMTLSGYLPPLCDPKDGNLLMDGGYINNLPADIARNMGAKTVIAIDVGSQDETDLCNYGD
SLSGWWLLWKRINPWAEKVKVPDMAEIQSRLAYVSCVRQLEVVKKSAYCEYIRPPIDRFK
TMDFGKFDEIYDVGYQHGKLLFTGWARGDIIDNMLKDHRSADYSDSKTKTDSYTCPGSDF
TDLAEIVSRIEPVQTYVDPDAAEAGDESDCLTEYEEDGMNTVREEEEEEEEEEEEGEQEL
DDLSPGEWGQNGVFQADEKSVRQRRKTEGEANTYSELSDC
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgggacagagcacctcggaacaagagggccaagaacatgcagatgcccctctggaagaa
gggtttaataacatcaaggcgtttgtggaggaagagctacagacgagcatgatgatgggg
atggtgattggtgcgggcatcgccataatcctcatcgccatcctcatcttcttcatgctg
cggaggatccagctcagaaacctgcaagcccaggaggcccccaagtatcgattccgcaag
agggacaaggtcatgttctatgggcgaaagatcatgcgcaaggtgtcccagtccacctct
tccctggtgggcacagcctcctcctcgcgcccacgactcaaaaagaagcagaaaatgctc
aacattgccaaaaagattctgcgttttaagaaggaggtgcccaccctggtagctaaggag
cctcctccctcagtgctggaggcggaccttacagagtttgacgtggccaactcccacttg
ccctccgaggtgctctacatgctcaagaacgtccgtgtgctgggccactttgagaagcct
ctgttcctggagctgtgtaaacacatggtgttcctgcagtttcaacagggagagtacgtc
ttcagaccgggccagcctgacagcagcatctacgtggtgcaggatggaaaactagaactg
tgccttactggaatggacggcaaggacggtgtggtgaaggaggtgtaccccggagacagt
gtccacagcctcctcagcatcctggacgtcatcaccggacaccagaagccgtacaagacg
gtgtcggcgcgggcggctgaggtgtctaccgtactgagtctacctgtcgaggccttcctc
tccatcttcgagaagtaccctgagagcctggtgcgggttgtccagatcatcatggttcgt
ctccaaagagtaacagttctggcgctgcacaactacctagggctcaccaacgagctcttt
agccacgagatgcagctcctgcgcctgctgcccctgtccccccaccccgtgccccgcacc
agcccccagcgccacggcaagcgtttcgggagcctgaccgtgcccgcggaggaccgcgag
gccgccgtgaaggacgcatcagatcctgggaaggatggagccacagtcccaccaaccctc
agcaggaccatctccatgcctgtagacatcgccggcatgcagaagaatctgcggtcggat
ttcgacatggcctacgagagaggacggatctcagtttccgctgaggacggcaacacgcca
cccacctatacacgggatcagcgggagaggagggtgaccgtagatgaggtgccgtcgggg
gtttacctgtaccccgaggaggaggggggtccggacaatcagttctcaccaggaccagga
cccgtccccggtcgccccagccctgccctgttcgaggaggccctgaaggagctcctcaaa
ctcatgaggatagaggaccccgctctgctgaatgggagagtgactctgcaccatgccaag
gcaggaaccgtgctggctagacaaggagaccaggatgtgagtctccactttatcctgtcc
ggctgcctccacgtgtaccagcggatgatcgacaagcaggatgcggtgtgtctgtttgtc
acccagccgggtgagatggtgggccagctggccgtgttgactggagaacccctcatcttc
accatcaaggccaacagagactgcaccttcctcaagatctccaagtctgacttctacgag
atcatgagggaacagcccagtgtggttctgagtgcagcccacaccgtagccatccgcatg
tcccccttcgtcagacagatggacttcgccatagactggatggctgtggaggccggcaga
gccctctataggcaggaagaccagtcggactgcacctacatagttctgaatggacgtctg
cgttctgttatacgtaaagctaacgggaagaaggagctggtaggagagtacggtcgagga
gacctcataggagtggttgaggctctgacccgacagcccagagccaccacggtccacgcg
gtcagagacacagagctggtcaagctaccagagggaacgctcaacaacatcaagaggagg
tacccacaggtggtcaccaggttgatccacctgctgggacagaagatcctggggaacctg
caacaggcccgcggaccattctcaggttctgccctcggccggtccagcgtagcgtccagc
cctgacgtcaccaacccggccagtaacctgtccactgtggccgtactgcccatctgtgac
gaggtgccaatcaacgccttcaacctggagctcagccacgccctcagcgccataggacct
gccctgctgctgaccagtgacatcatcagagagcgactgggggcctccgctctggatagt
atccacgagtaccgtctgtctggctggctggcccagcaggaggacatcaacaggatagtc
ctgtaccagacagacagcagtatgactccctggacccagcgctgcatcagacaggctgac
tgcatcctcatcgtgggcctgggggaacaggaacctgcgctgggacagttagagcagatg
ttggagaacactgcggtgagggccctgaaacagctggtgctgctccataaagaggacggc
tcggggccctccaggaccgtagagtggctcaacatgaggagctggtgctccggacacctc
cacctccgctgcccccgccgggtcttctcacgacgcagcccctcaaaactgagggaggtg
tatgagaaggtgtttgagaagacagcggacagacacagtgatttctctcggctggcccgg
gtactgactgggaacagcatcgctgtggtgctaggaggaggaggagccagaggctgctcc
cacgtgggtgtgatcaaggccatggaggaggcagggattcccatcgacatcgtgggcggg
acgtccatcgggtcgttcatcggggcgctgtacgccgaggagaggagtgcggtgcgcacc
aagcagagagcccgcgagtggtccaaggcgatgaactccgtattcaaaaccatccttgac
ctgacctatcccatcacctcaatgttcaccggcgccgccttcaacaccagcatctccaaa
gtgttccaggacaagcaggctgaggacctgtggttgccctacttcaacgtgactactgac
atcacggcgtccgccatgcgtgtgcaccaagacgggtcactgtggcgctatgtgagggcg
agcatgaccctctcagggtacctgccgcccctctgcgaccccaaagatggcaacttgctt
atggacgggggctacatcaacaacctgccagcggacatcgcgaggaacatgggcgccaag
actgtcatcgccatcgacgtaggtagccaggacgagacggacctctgtaactatggcgac
agcctgtcgggctggtggttgctgtggaaacgaatcaacccctgggcagagaaagtgaag
gttccagacatggcagagatccagtccaggctggcctatgtgtcgtgtgtacgtcagctg
gaagtggttaagaagagtgcctactgtgagtacatcagaccacccatcgaccgcttcaag
acaatggacttcggcaagtttgacgagatctacgatgtgggctaccagcacggcaagctg
ctcttcaccggatgggcccgtggtgacatcattgacaacatgctcaaggaccaccgctcg
gcagactacagcgacagcaagaccaagacggactcctatacgtgtccagggtcagacttc
actgacctggctgagatagtgtccaggattgagccggtccagacctacgtcgatcctgac
gctgctgaggcgggggacgagtcggactgcctgacggaatatgaggaggacgggatgaac
acggtgagagaagaggaggaggaggaagaagaggaggaggaagagggggaacaggaactc
gatgacctctccccgggagagtggggtcagaacggagtcttccaggcggatgagaagtca
gtccgccagaggaggaaaacagaaggtgaagccaacacctactccgagctctccgactgc
tga
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