Oncorhynchus tshawytscha (Chinook salmon): 112265557
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Entry
112265557 CDS
T05605
Name
(RefSeq) roundabout homolog 2 isoform X1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Pur_ac_phosph_N
Sp38
Motif
Other DBs
NCBI-GeneID:
112265557
NCBI-ProteinID:
XP_024298730
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Position
LG13:67767239..67847235
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AA seq
1417 aa
AA seq
DB search
METHSTHVLLLTVSIICTASGSRARFEDGPPWIVENPSDLIVSKGEPATLNCKAEGRPNP
TVEWYKDGERVETDQDDPRSHRMLLPSGSLFFLRIVHGRRSKPDEGVYTCVARNYLGEAV
SHNASLEVAILRDDFRQAPSDVVVAAGEPAVLECVPPRGHPEPTVSWKRNNARVSNKDDR
ISMRGGKLMISHTRKSDAGMYVCVGTNVVGERDSDPAELVVYERPVLMRRPVNQVVMEEE
TIDFLCEVHGDPAPTVRWRREQAELPRGRFEIRSDNSLRLTGVREEDEGTYTCMSENSVG
KTEASAMLQVHVPPQIAIKPRDQNSAQGRSVTFRCGTRGNPSPAIFWKKEGSQMLLFPGQ
HFSQSGRYSVSMSGELSITDVHPEDSGYYICQAISVAGSVLTKALLEVEGGPSHRVPPII
RQGPANQTLALGSVAQFHCHAIGGPSLKIGWEKDGKKIVEDDPRMNLMENGTLQITNVED
TDSGMYTCVVSSAMGESSWSGTLTMREDGAPGSSVPRVSESIQLPGPPQRPVVTEVTRGT
VTLTWQSNPHEGGAAVTSYIIEAFSQSVGSVWQTVADRVKQEKHTVIGLYPNTVYLFIVR
AVNSYGLSDPSPISEPIRTQDGSPTEQGVDHRHVQRELGEVSVFLQKPVVLSPTSAQVSW
TVARQSQYVQGYRLLYRSTGSIWLVQDVKAGPELSTVLSDLRTDTEYEVKVLPYFNELQG
LDSPLVLLRTPEEVLSAPPQAVSVVQLSNSSSIRVSWEPPSDEQSGIVLEYKVWCLGSDS
EMKTESHINRTVDGAVLSILLTGLLPDLQYNVMVAAVTILGVGEHSPPIDLVLTLSLDMP
SDPLQKDSSLSLSEQITGVVCQPAFIAGLGVAPWLALMGFSGWLYCRHRRRKELGHYTTS
FAYTPAVGFAHIEGSGLSNGSRPGMLGSNMGNVAQNGKDSVTCCSGKLDSTDRYYNVAIS
NYLSQSEKYSSVSTDSPIYSTINTAAAEDLQGLAYYNTHSNTPCTQGSNTPCTQGSNTPC
TQGSNTPCTQGPDSYASTPVLSNFGLFGLVQDLDQWTIQSGQSVEYTKMQYARTSNAKLV
KQRSVCPPFKPAPLNWEDVLSLPLPANKGCGYTKRYQDEGRNSSSNEKDRCPPLPARTYL
MDGSRQVLPSLPSFRREKLAQDTTSSLQSTATVPPSPQEETPNHNDSPRLQHFDLRSHYE
PGSQVSHSNPNLFANIDAYDVSGPYHTSQWGDPFTGDRFTSEMSGRGGQSPPFPADSSYA
TQGHRSKKKALREGQHRRELHDQAELPPPPAPPPAADDPMQLLVDVLGCSRRPSAENSPA
LQRRGGDYSSPQKRGPAMRGSQDEGVIPYCQSSFLPRGQMSGYSSLGGVASSRASTGQRG
PGVAQRRDEVVLLLPSLLYSSLLPWYQRRAEDKSESM
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atggagacacatagcacccatgtcctgctattgacggtatcaatcatctgtaccgcatca
gggtcccgggcacgttttgaggacggcccaccttggatcgtggagaacccctctgacctg
atcgtgtccaagggggagcccgccacccttaactgcaaggcagaggggaggcctaacccc
actgtggagtggtacaaggacggtgagcgggtggaaacagaccaggatgaccctcggtct
caccgcatgctccttcccagcggctccctcttcttcctgcgtatcgtccacggacgacgc
tctaaaccagatgagggcgtctacacttgtgtggcacgtaactacctaggagaggctgtc
agtcacaacgcttcgctggaagtagccattctgagggatgacttccgccaggcccccagt
gatgtggtggtggcagccggtgaaccagcggtcctggagtgtgttcccccccgtggtcac
cctgagcccaccgtctcctggaagaggaacaacgcccgcgtcagcaacaaggatgaccgc
atctctatgcgtgggggcaagctgatgatctcccacaccaggaagagtgatgctggcatg
tatgtgtgtgtgggcaccaatgtggtgggagagcgggacagtgatcctgctgagttggtg
gtgtatgagcgtcctgtgctgatgcggaggccggtgaaccaggtagtgatggaggaagag
accattgacttcctgtgtgaggtacatggagaccccgctcccacggtacgctggcgccga
gagcaggcagagctcccccgcgggaggtttgagatccgcagtgacaacagcctgcgtctg
accggggtgagagaggaggacgagggaacttatacctgtatgtctgagaacagcgtgggc
aagactgaggcgtcagccatgctacaggtccatgtgcccccacagatcgccatcaaaccc
cgggaccagaactcggctcaggggcgcagtgtcaccttccgctgtggcaccagaggaaac
ccatcacctgccatcttctggaagaaagaaggaagccagatgctgctgtttcctggccag
cacttctcccagtccggccgctactctgtgtccatgagtggagagctgtccatcaccgac
gtgcacccagaggattctgggtattatatctgccaggccatcagtgtagcaggaagtgtc
ctgaccaaagccctgctggaggtggaagggggtccttcacaccgtgttccaccaataatc
cgccaaggcccagccaatcagactttggctctggggtccgtagcccagtttcactgtcat
gcgattggtggaccctcactaaagatcggatgggaaaaggacgggaaaaagattgtggag
gacgacccccgcatgaacctgatggagaacgggacactgcagatcactaatgttgaggat
acggattcgggaatgtacacgtgtgtggtgtccagcgccatgggggagtcaagctggagt
gggacactcaccatgagagaggatggagcccctgggtcatcagttccccgggtgtcagag
tccatccagctgccagggccgccccagaggcctgtggtgacggaggtgaccaggggcaca
gtcaccctcacctggcagtccaacccccacgagggtggggccgctgtgacctcctacatc
attgaggccttcagccaatctgttggcagtgtgtggcagacggtagctgaccgtgtgaaa
caggagaagcacacagtcattggcctgtacccaaacactgtctacctgttcatcgtccga
gcggtcaactcctacggtctgagtgaccccagccccatctctgaacccatcaggacacag
gatgggagtcctacagagcagggggtggaccacagacatgtgcagagagaactaggggag
gtgtctgtcttcctgcagaagcctgtggtcctatcacccaccagtgcccaggtctcctgg
actgtggcgcgtcaatctcagtatgtgcagggctacaggctgctgtaccgctccactggc
agcatctggctggtccaggacgtgaaggctgggcctgagcttagcactgtcctatcagac
ctgcgcacggacacagagtatgaggtgaaggtccttccctacttcaacgagctgcaggga
ctggacagccccctggtgctgctacgcacccctgaggaggtgttgagtgctcccccgcag
gctgtgtcagtggtccagctcagcaacagctccagcatccgtgtctcctgggagcctccc
tctgacgagcagagtggtatagtcctggagtacaaggtctggtgcctgggaagtgactct
gagatgaagacagagagccatatcaacaggacagtggatggagcagtattgtccatccta
ctgactgggctgctaccagacctccagtacaatgtgatggtggctgcagtcaccatcttg
ggagttggtgaacacagcccacctatagacctggtcctcaccctgtcactggacatgcct
tcagaccctctgcagaaagacagcagcctcagtctatcagagcagatcacgggtgtggtc
tgccaaccagcgtttatcgctgggttgggtgtggctccgtggctggcgctcatgggtttc
agtggttggctgtactgtcgccaccgcaggaggaaggagctgggacactacaccacctca
ttcgcctacacacctgcagttggatttgctcacattgaaggatctggtctcagcaacgga
agtagaccagggatgctgggctccaacatggggaacgttgcccagaatggaaaagactca
gtcacctgttgctctggcaaactggactctacagacagatactacaatgttgccatctcc
aattacctgagccagtctgagaaatacagctcagtgtccactgacagtcccatctacagc
accatcaatacagctgctgctgaggacttgcagggtttagcctactacaacacacactcc
aacaccccctgcacccagggctccaacaccccctgcacccagggctccaacaccccctgc
acccagggctccaacaccccctgcacccagggccctgactcctatgccagtacccccgtc
ctctccaacttcggcctcttcggtctggtgcaagacctggaccagtggaccatccagtct
ggacagtctgtagagtacaccaagatgcagtacgccaggacaagcaatgccaagctggtg
aagcagaggtcagtgtgtcctccatttaagcctgcaccactcaactgggaggacgttctg
tctctaccactgcctgctaataaaggatgtggttacaccaagagatatcaggatgagggg
aggaacagtagctccaatgagaaggacaggtgtcccccgctgccagcaaggacttacctg
atggatggctccaggcaggttttacccagcctgccctccttcagaagagagaagctggcc
caggacaccacctccagcctacagtccacagccacggtccccccctccccccaagaggag
acacccaaccacaacgacagcccccggctgcagcactttgacctgcggagccactacgag
cccggttcccaggtctcccattccaaccccaacctgtttgccaatatagacgcctatgac
gtcagcgggccataccacaccagccaatggggagaccccttcacaggggatcgctttact
tcagagatgagtggcagaggaggacaatctcctcctttcccggctgactcctcatacgct
acgcagggacacagaagcaagaagaaagccctcagggagggccagcaccgacgagagctg
catgaccaagcagaactgccccctccgccggccccaccccctgcagcagatgaccccatg
cagctcctggttgatgtgctgggctgtagccggaggccttcggcagagaactcgccggcc
ctacagaggagaggaggagactactcctcaccccagaagagagggcctgccatgaggggc
tcacaagatgagggggtaatcccgtactgccagtccagctttctgccccggggtcagatg
tccggctacagttcccttggtggagtggcctcctcgcgggcttcaactggacagagaggg
cctggagttgcccagaggagggacgaggttgttttgctgcttccttctttgctgtactcc
agcctgttgccatggtatcaaagaagagctgaagacaaaagtgaaagcatgtag
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