Oligella ureolytica: I6G29_04365
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Entry
I6G29_04365 CDS
T07321
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
oue
Oligella ureolytica
Pathway
oue03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oue00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6G29_04365 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oue03019
]
I6G29_04365 (recQ)
03400 DNA repair and recombination proteins [BR:
oue03400
]
I6G29_04365 (recQ)
Enzymes [BR:
oue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6G29_04365 (recQ)
Messenger RNA biogenesis [BR:
oue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6G29_04365 (recQ)
DNA repair and recombination proteins [BR:
oue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I6G29_04365 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
PSD2
HHH
Motif
Other DBs
NCBI-ProteinID:
QPT40810
LinkDB
All DBs
Position
complement(849929..851743)
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AA seq
604 aa
AA seq
DB search
MLSAKEVLRHVFGYEEFRSGQEAIVEHLISGEDALILMPTGAGKSLCYQIPGLVRSGVAV
VVSPLVALMHDQVDALRALGVSAVSLHSGMVWDEIKAAEHTLLRGEIKFLYVSPERFENP
RFLRLLDNLQIGLFAIDEAHCVSQWGHDFRPAYLDLSILPERWPEVPRVALTATATELTR
AEIVERLHLEEAQQFISSFDRPNIRYEVVEKDKERQQLLSFINRQHAGDSGIVYCLSRQK
TEGVAAFLQKSGVRALAYHAGLSAEERYDNQRIFQQEDGVVIVSTIAFGMGINKPDVRFV
AHIDIPRSIEAYYQETGRAGRDGLPATAWLAYGLQDLMQQRKLIEGSNGDDAFKERSADA
LNAMLAFCEASSCRRQRVLRYFGEQSEPCGNCDICADPPRLWDATVAAQKLLSTIYRLRK
EYGEFSGAKHLIDILHGKRTERVIQQKHHQLTVFGIGRELDESQWRGLIRQLLAAEYLEM
QSEGFRTTYYLAKKSHDILLGKKKLRLRQIEPLSKLRSNNQMPSQNRAVFELSAEDTLLF
EKLREWRLEEAKASSVPAYIVFRDITLYQLALKKPQSLEDLAQVEGMGDKKIATYGEAIL
NLLK
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
gtgttatcagcaaaggaagttctgcggcatgtttttggctatgaggagtttcgtagtggc
caggaagcgattgtcgagcatctgattagtggcgaggatgctctgattttgatgccaacg
ggtgctggtaaatcactttgttaccaaattcccggtctggtcagatcgggtgttgccgtc
gtcgtctcccccttagttgccctgatgcatgatcaggtcgatgcgttgcgcgcgctaggt
gtgagtgcggtcagtttgcactcaggcatggtgtgggatgagattaaagcggctgaacat
actttattgcgtggagagatcaagttcttatatgtctcgcccgaacgttttgaaaatcct
cgctttctacggttattagataatcttcaaattggcttatttgcgattgatgaagcgcat
tgtgtttcacagtggggtcacgacttcagaccggcctatttggatttgtctattttgcct
gagcgttggcctgaggtgccacgtgtcgccctcactgcgactgcgactgagttgacacgt
gcagaaattgttgagcgtttacaccttgaagaagctcagcaatttatcagcagctttgat
cgacctaatattcgctatgaggttgttgaaaaagacaaagaaaggcagcaactactgagt
tttattaataggcagcatgcgggcgattccggtattgtgtattgtttgtcccgacaaaaa
accgaaggcgtagcggcttttttacaaaaatcaggtgttcgtgccttggcttatcatgcc
ggattgagtgcagaagagcgctatgacaatcaacgcattttccaacaagaagatggggtg
gtgattgtttctacaattgcctttgggatgggtattaataaaccggatgtgcgttttgtt
gcgcacattgatatcccccgttccattgaggcatattatcaagaaaccggtcgtgccgga
cgtgatggtttgccggctaccgcttggctggcttatggtttgcaggatttgatgcagcag
cgtaagttgatcgaaggctctaatggtgatgatgcctttaaggagcgttcggctgatgcg
cttaatgccatgctggctttttgtgaggcgtcatcttgccgtcgccagcgtgtattgagg
tattttggtgagcaaagtgagccctgcggtaattgtgatatttgcgcagatcctccgcgc
ttgtgggatgccacagttgctgctcaaaagcttttatcgaccatttaccgactccgaaag
gaatatggtgagtttagcggcgcaaagcatttaattgatattttgcacggcaaaaggact
gagcgcgttattcagcaaaagcatcatcagctgacggtctttggaattgggcgtgagtta
gatgagagtcaatggcgcggtttaatccgccagcttttagcagcagagtatttggaaatg
cagtcagaggggtttagaacgacttattatctggctaaaaaaagccatgatattttattg
ggtaagaaaaaactccggctaagacaaatagagccgctcagtaagttacgatccaataat
caaatgccgtcgcaaaatagagcggtttttgagttgtcggcagaagacaccttattattt
gaaaagctgcgagaatggcgccttgaagaagctaaagccagcagtgtgccggcttatatt
gtctttagagatatcaccctatatcagttggcactcaagaagccgcaaagtctcgaggac
ttagcgcaggttgaggggatgggcgataagaaaatcgccacctacggtgaagctattttg
aacttgttaaaataa
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