Opisthorchis viverrini (Southeast Asian liver fluke): T265_13304
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Entry
T265_13304 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03030
DNA replication
ovi03410
Base excision repair
ovi03420
Nucleotide excision repair
ovi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T265_13304
03410 Base excision repair
T265_13304
03420 Nucleotide excision repair
T265_13304
03430 Mismatch repair
T265_13304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ovi03032
]
T265_13304
03036 Chromosome and associated proteins [BR:
ovi03036
]
T265_13304
03400 DNA repair and recombination proteins [BR:
ovi03400
]
T265_13304
DNA replication proteins [BR:
ovi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
T265_13304
DNA Replication Termination Factors
ELG1-RFC complex
T265_13304
Chromosome and associated proteins [BR:
ovi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
T265_13304
DNA repair and recombination proteins [BR:
ovi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
T265_13304
Check point factors
HRAD17(Rad24)-RFC complex
T265_13304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
AAA_16
AAA_assoc_2
AAA_24
AAA_22
Mg_chelatase
RuvB_N
AAA_14
AAA_30
AAA_11
AAA_19
Bac_DnaA
DUF815
AAA_28
bpMoxR
IstB_IS21
AAA_5
ResIII
SLFN-g3_helicase
DUF1940
AAA_25
AAA_18
AAA_7
TIP49
RNA_helicase
MCM
AAA_23
Motif
Other DBs
NCBI-GeneID:
20327471
NCBI-ProteinID:
XP_009166517
UniProt:
A0A074ZVA6
LinkDB
All DBs
Position
Unknown
AA seq
339 aa
AA seq
DB search
FEEAQKSGPHPLGGEIVDRCFDGYQLLHFSRPKTIDEVAYQTEVVSVLRKCVEGADLPNL
LFYGPPGTGKTSLILAVARQIFGPLYSERVLELNASDERGINVIREKVKTFAHLAVSSGT
GMGSSAKIPPYKLIVLDEADSMTAPAQAALRRTMETETRTTRFCLTCNYVTRIIDPITSR
CAKFRFRPLDNEVARDRLRHICDEERLDIEDEVLDHVLQLSHGDLRRAITMLQSVCQLWH
PVNRTVTKDHFDEVAAVVPDKMINSLLKAATAGRFDDLQLQIKLIGVNGPPASETVKDRN
GVNISNEEERLNRWAEYFEQQFSRPSAGTPLEPTGNVEP
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
ttcgaagaagcccaaaagtcaggcccacatcccttgggtggagaaatagtagatcgatgt
tttgacggttatcaactgcttcattttagtcgaccaaaaacaattgatgaagttgcttat
cagacggaagtcgtttcagtgctgaggaaatgtgttgaaggagcagatttgcccaacctg
ttgttttacggtccaccgggaacgggaaagacctctctgatcctggcggttgcacgacag
atattcggccccttgtactcagagcgtgtgttagagttgaacgctagtgatgagcgtggt
attaatgtgattcgtgaaaaagtcaagacgttcgcccacctagctgtgagcagtggcact
ggcatggggtcatccgcaaaaatccccccttacaaactcatcgtactggatgaagcggat
tcaatgactgctccagcacaggcagcacttcgacgtacgatggaaacagaaacgcgaaca
acccgtttttgtctgacttgcaactacgtgactcgcatcatcgacccgatcaccagtcgc
tgtgcaaagtttcgattccgtccactggacaacgaagtcgctcgagatcgattgcgtcac
atttgtgatgaggaacgcttggacattgaagacgaggttctcgatcatgtgctccaactg
tcccacggtgacctgcgacgtgccatcacaatgctacaaagcgtttgtcaactttggcat
ccggtcaataggaccgtcaccaaggatcatttcgatgaagtggctgcagttgttcctgac
aagatgatcaacagcctgctgaaagccgcaactgccggtcggtttgatgatttgcagttg
cagataaaattaatcggtgtgaacggtccacctgcgagtgaaaccgtcaaggatcggaat
ggagtgaacatctcgaatgaagaagaacgcctcaaccggtgggccgaatacttcgaacaa
caattttcaaggccatcagctggcacccctctggagcccacaggtaatgtagaaccctga
DBGET
integrated database retrieval system
