Opisthorchis viverrini (Southeast Asian liver fluke): T265_14685
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Entry
T265_14685 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
T265_14685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ovi03041
]
T265_14685
Enzymes [BR:
ovi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
T265_14685
Spliceosome [BR:
ovi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
T265_14685
Complex C
U4/U6.U5 tri-SnRNP related factors
T265_14685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
DEAD
nSTAND3
AAA_22
T2SSE
AAA_19
ATPase
TsaE
SLFN-g3_helicase
AAA_30
Motif
Other DBs
NCBI-GeneID:
20328851
NCBI-ProteinID:
XP_009173051
UniProt:
A0A074Z7Y2
LinkDB
All DBs
Position
Unknown
AA seq
1109 aa
AA seq
DB search
PQETVVEESDGLEEYEKEELSREKDIKERDEFVKRLLSKDHESTKKLTSGSGSKYEEALR
KVEAGEMTRKELVEEFKKESRRAYLRKRQADKLADLKGEVEDEELFFDQEELTARELAEL
QYKRTLLAVAQAHQQAGELESANRYFIPSEEKRPDESFQEESQEKGVNEEGKRWEQEHLS
SALYSFGARDKSEKEMRLRSAVAPFRCLSDMPPEGNMRAEVVPGYPSLDRGSQKLEVRFE
PQTSWSAKFDLVLDDEIDFLKTLTRPGANTEEEPVSEEKKTKSVSRRETLAEARRSLPIY
KFREALLQAIADHQVLIIEGETGSGKTTQIPQYLYEAAKFDLVLDDEIDFLKTLTRPGAN
TEEEPVSEEKKTKSVSRRETLAEARRSLPIYKFREALLQAIADHQVLIIEGETGSGKTTQ
IPQYLYEAGYCVGGKRIGCTQPRRVAAMSVAARVSQEMNVKLGGEVGYSIRFEDCTSERT
LIKYMTDGMLLREFLLEPDLGGYSVMLIDEAHERTLHTDILFGLVKDVARFRPDLKLLIS
SATLDAEKFAKFFDDAPDVARFRPDLKLLISSATLDAEKFAKFFDDAPVFRIPGRRYPAP
EADYIEAAVISVLQIHVTQPPGDILVFLTGQEEIETANEMLVERTRKLGSKIRELLILPI
YSTLPSDMQARIFSPTPPGARKVVLATNIAETSLTIDGIIYVIDTGFCKQKFYSARSGIE
SLIVVPISQAAADQRAGRAGRVAAGKCFRLYTAHAYRTELEPQPVPEIQRTNLGNVVLLL
KSLGIDDLLHFDYMDPPPHDSLIMALEQLYALGALNHRGELTKMGRQMAEFPCDPMLSKM
ILASDKYKCSGDAITIAAMLSVNNAIFYRPKDKLIHADTARKGFFHTAGDHLMLLNVYNQ
WSAADFSTHWCYEHFIQYRTMKRARDIRDQFVSLLERVEISLTSNPSEHINIRKVNFSTH
WCYEHFIQYRTMKRARDIRDQFVSLLERVEISLTSNPSEHINIRKSITAGFFYHTARFTG
NGYKTVKQKHTIHPHPNSCLAEELPKWVIYHELVFTTKEFMRQLIEIEPKWLLEVAPHYY
KEKEIECGVANTPRNKGKSRQELEPREGQ
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
ccacaagaaacggttgtcgaagagtccgatggcttagaagagtacgaaaaggaagagcta
agccgtgagaaggatattaaagaacgggatgaattcgtgaagcgcttgctcagcaaagat
catgagagtactaaaaagttgacttctggtagtggctcaaaatacgaagaggcgctacga
aaggtcgaggccggtgaaatgaccagaaaggaactcgtcgaggagtttaaaaaagagtcc
aggagagcatatctccggaagcggcaggctgacaagctcgccgacctgaagggtgaagtg
gaggatgaggagttattttttgaccaggaggaattgactgctcgagagctagctgaactg
caatataagcgaactctcttagctgttgcacaggcccaccagcaagctggtgaattggag
agcgccaatcgctattttatacccagtgaggaaaagcgtccggacgaaagttttcaggaa
gaatcccaggaaaaaggtgtcaacgaggaaggaaaacgatgggaacaagagcacctttcc
tctgccttgtattcctttggcgctagggataaatccgagaaggagatgcgcttacgttca
gctgtagcaccctttcggtgcctaagtgacatgccaccagaaggaaacatgagggctgag
gtagtgccaggttacccaagcctagacagaggaagtcaaaagttagaggtcaggttcgaa
ccacagacctcttggtcagcaaagtttgatcttgtactggacgacgaaattgactttttg
aagacattgactcgtccaggagccaatacggaagaggaacccgtttctgaagaaaagaaa
acaaaatcggtcagtcgccgcgaaactctcgctgaagcaaggcgttcgctccccatctac
aaatttcgagaagcgttgctgcaagcaatcgctgatcatcaggtgctcattatcgagggc
gaaacagggtccggaaaaactactcagattccacagtatctgtacgaagcagcaaagttt
gatcttgtactggacgacgaaattgactttttgaagacattgactcgtccaggagccaat
acggaagaggaacccgtttctgaagaaaagaaaacaaaatcggtcagtcgccgcgaaact
ctcgctgaagcaaggcgttcgctccccatctacaaatttcgagaagcgttgctgcaagca
atcgctgatcatcaggtgctcattatcgagggcgaaacagggtccggaaaaactactcag
attccacagtatctgtacgaagcaggttattgtgtcggcggtaaacgaatcgggtgcacg
cagcctcgtcgtgtcgctgccatgtctgttgcagctcgcgtttcgcaggaaatgaatgtg
aagttaggaggcgaagtgggctactcgatacgttttgaggactgcacttccgagcgcaca
ctaataaaatatatgactgacggcatgctgcttcgcgaatttctccttgagccagatctg
ggcggctactcggtcatgctgatcgatgaggcccatgaaaggacacttcacacagatata
ctcttcgggttggtcaaggatgtcgctcgattccgtcccgatctcaaacttctcataagt
tccgctacgctcgatgccgagaaattcgccaaatttttcgacgatgcacccgatgtcgct
cgattccgtcccgatctcaaacttctcataagttccgctacgctcgatgccgagaaattc
gccaaatttttcgacgatgcacccgtattccgtattcccggaagacgatatcccgctcca
gaggcggactatattgaagctgcggtgatctcagtgcttcagattcatgtaactcaacca
ccgggtgacatcctggtatttctaactggacaggaggaaatagaaacagccaatgagatg
ttggtcgagcgaactcggaaattgggtagtaaaatacgggagctcctcatactgccaatc
tactccacacttccttcggatatgcaagcacggattttctcaccaacccctccaggtgcc
cgtaaggtcgttcttgctaccaatattgctgagacatctctgactatcgatgggataatc
tatgttattgatacgggtttctgcaagcaaaagttctacagcgcccgctcaggtattgaa
tctctaatcgtggtaccgatctcacaggctgcagcagatcaacgtgctggtcgtgccgga
agagtagctgcgggaaagtgtttccggctttacactgcccatgcttaccgcactgaactg
gaaccgcaacccgtcccggagatccagcgcaccaacctgggtaatgtggtactacttctg
aaatcccttggtatcgatgatttgttgcactttgactatatggacccacctccgcatgac
tctctcatcatggctttggagcagttgtatgctttgggagcgttgaatcaccgaggcgaa
ctaaccaaaatggggcgtcaaatggctgagtttccttgtgacccgatgttgtcgaaaatg
attttggcgtccgataaatacaagtgtagtggcgatgctatcactatcgctgctatgcta
tccgtgaacaacgcaatcttttatcggccgaaagataagctgatccatgcagacactgca
cgaaaaggctttttccacacggccggagaccatctcatgttgctgaatgtatacaaccag
tggagtgcggcggatttttccacgcattggtgctatgaacatttcatccagtaccggaca
atgaaacgagccagagatatccgcgaccagttcgtcagcttgttagaacgggttgagatt
tcgttaacaagtaacccgagtgaacatatcaatatccgtaaagtaaatttttccacgcat
tggtgctatgaacatttcatccagtaccggacaatgaaacgagccagagatatccgcgac
cagttcgtcagcttgttagaacgggttgagatttcgttaacaagtaacccgagtgaacat
atcaatatccgtaaatctattactgcgggctttttttatcacacggcacggtttaccgga
aacggttacaagactgtgaaacaaaagcacacaattcatccccacccgaattcttgtctg
gctgaggaacttcccaagtgggtcatctatcacgagctggtgttcactacgaaagagttt
atgcgccaacttattgaaatcgaacccaaatggctcttggaagtagctccgcattactac
aaggaaaaggagattgagtgcggagtggcaaacactcccagaaataagggcaagtctcga
caggagcttgagccccgtgaaggacaa
DBGET
integrated database retrieval system
