Polycladomyces abyssicola: JIR001_14000
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Entry
JIR001_14000 CDS
T07192
Symbol
yqiR
Name
(GenBank) putative sigma L-dependent transcriptional regulator YqiR
Organism
pabs
Polycladomyces abyssicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS
PAS_9
Sigma54_activ_2
PAS_4
HTH_8
PAS_8
PAS_10
AAA_5
AAA
AAA_2
PAS_7
HTH_30
Mg_chelatase
NAD_binding_3
bpMoxR
AAA_3
sCache_3_3
DapB_N
HTH_50
PdtaS_GAF
HTH_28
AAA_16
Bac_DnaA
nSTAND3
Glu_dehyd_C
ADH_zinc_N_2
AAA_7
NB-ARC
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
BCU81617
UniProt:
A0A8D5ZN60
LinkDB
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Position
1412946..1415015
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AA seq
689 aa
AA seq
DB search
MKRFLIVGGGKGGTALLRTLSEMDRVAVMGVVDVNDQAPAIRLAREKGIPTGTDVTPFLR
ERPDVILEVTGDPAVYDRLCRLTEQGTLVISGAVANLMLQLIEEKETWFEAWRSRQRELD
AILNSTHDGMIAVNKQGKITLFNRAAERLMKMSMSDVMGKPVTETIPNTRLDYVLKTGKR
ELNRQQTLPDGTRIVTNRVPVTDRNGNVIGAVAVFRDITEVASLSQQVTNLESMKSLLQA
IIDSSDDAISVVDAQGIGILINPAYTRLTGLKPEEVIGKPADTDISEGESMHMKVLKTRQ
PVRGVPMKVGPHRKDVVVNVAPIIVDGELKGSVGILHDMSEIQKLNQELERARRIIRTLE
AKYTFDDIIGRSEAFTYAVEQARQAAKTRATVLLRGESGTGKELFAHAIHNDSDRKYHQF
VRVNCAAISESLLESELFGYVEGAFTGARRGGKKGLFEEASGGTIFLDEIGELAPNIQAK
LLRVLQEKEVLRVGGTKPIPVDVRVIAATNVDLEKAIREKRFREDLYYRLNVLPIHIPPL
RQRKEDLPDLALHVIKRFNLEYGRNVETIDPRALQALQSYSWPGNVRELENVLGRAMINM
GYHERTMRLEHLPPLEAKSRAVFPDMENGTEGETLQEVLARVEKETILRTYRQCGGNKTE
TARRLGISVRNLYYKLERYQLDSDPEMDM
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacggtttctgattgtgggtgggggaaagggaggaacggcacttcttcgaaccttg
tccgaaatggaccgagtggcggtgatgggtgtggtcgatgtgaacgatcaggctcccgcc
attcgtttggcacgggaaaaggggattccgaccggtacggatgtgactccctttctgcgc
gagcggcccgatgtcatcttagaggtgaccggagacccggccgtttacgaccgtttgtgt
cgtctcacggagcagggaaccctcgtgatctcgggtgccgtcgccaatctcatgttgcag
ttgatcgaagagaaagaaacgtggtttgaggcatggcggtcccggcaacgggaattggac
gcgatcctcaattccacgcatgacgggatgatcgccgtcaacaaacaggggaaaatcacg
ctgtttaaccgggcggctgaacgattgatgaaaatgagcatgtccgacgtgatgggcaaa
cctgtaacggagacgatccccaatacccgtctggattatgtgctgaaaaccggcaaacgg
gagctgaaccgccaacagacattgcccgacggtacgcgaatcgtgaccaaccgcgtgccg
gtgacagaccgtaatggcaatgtgatcggcgccgtggccgtttttcgggacatcacggaa
gtggcctccctcagtcagcaagtgaccaacctggaaagcatgaaaagtttgctacaagcc
attatcgactcctccgacgatgccatctccgtcgtggatgcgcaggggatcggcattctg
atcaaccccgcctatacccggttgaccggcctgaagccggaggaggtgatcgggaagccg
gctgacaccgacatctccgaaggggaaagcatgcacatgaaggtgctgaagacacggcaa
ccggttcgcggggtgccgatgaaagtgggtccgcaccgcaaggatgtcgtcgtcaatgtt
gccccgattatcgtcgatggggaattgaagggcagtgtcggcattttgcacgatatgtcc
gagatccaaaagctgaatcaggagttggagcgggcccggcggatcatccgcacactggag
gcgaagtatacgttcgacgacatcatcggccgaagcgaggcgtttacctatgcggtcgaa
caagcccgacaagcggcgaaaacacgggcgacggttctgttgcggggggaatccggtacc
ggaaaagagctgttcgctcatgcgatccacaatgacagcgaccggaaataccatcagttc
gtccgtgtcaactgtgcggccatttccgaatcgctgttggaaagcgagctgtttggatat
gtcgagggggcgttcaccggggcgcgtcgcggcggcaaaaagggattgtttgaggaggcg
agtgggggcaccatttttttggatgaaatcggagagttggcccccaacattcaagccaaa
ctcttgcgtgtcctgcaggagaaggaggtactccgtgtcgggggaaccaaaccaatcccc
gtcgatgtgcgggtaattgccgccaccaatgtcgatttagaaaaggcgatccgggaaaaa
cgcttccgggaagatttgtactaccggctcaatgtcttgccgatccacattccgcccttg
cgtcaacgaaaagaggatttacctgacttggccctgcatgtgatcaagcggttcaaccta
gaatacgggcgcaatgtggagacgatcgatccgcgggcgcttcaggccttgcaatcctat
tcatggcccgggaatgtgcgggagctggagaacgtgttgggtcgggcgatgattaacatg
ggttatcacgaacgaacgatgcggttagagcatttgccgccgttggaagcgaagtcccgt
gcggtgttcccggacatggagaatgggacggaaggggaaacgctccaggaagtgttggcc
cgcgtcgaaaaggagaccatcctccgcacctatcgtcaatgtggcggcaacaagacggaa
acggcccggcggttgggcatctccgtgcgcaatctctattacaagttggagcgttatcag
ttggattcggatccggagatggatatgtag
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