Salipiger abyssi: Ga0080574_TMP2282
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Entry
Ga0080574_TMP2282 CDS
T04681
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
paby
Salipiger abyssi
Pathway
paby03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Ga0080574_TMP2282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paby03400
]
Ga0080574_TMP2282
DNA repair and recombination proteins [BR:
paby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Ga0080574_TMP2282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
AAA_29
Motif
Other DBs
NCBI-ProteinID:
APZ52616
UniProt:
A0A1P8UTG1
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Position
1654966..1657596
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AA seq
876 aa
AA seq
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MMAQYLEIKADHPDALLFYRMGDFYELFFDDAAAAAEALDIALTKRGKHAGEDIPMCGVP
VHAAEGYLLTLIRKGFRVAVCEQLESPAEAKKRGGKSVVKRGVVRLVTPGTLIEDSLLEA
RRHNYLAALARVRDEWALAWADISTGAFHVMPLGQARIGAELARLAPSELLVSEDVGETL
REVLGDLGVFPTVLGRASFDSSGAEARLCTLYGVQTLAGFGSFARCELAAMGALVDYLDI
TQKGRLPLLRAPQRDAVSRMLQIDAATRRNLELTQSMNGGRQGSLLSVIDRTVTPGGARL
LERRVSSPSRELDVIARRLAALDWAIESPQGSALRDALRKVPDLDRALSRLGLDRGGPRD
LAAVRNALEQAEEIAQALDEATLPELLAEARAALRGHDDLLALLDAALVAEPPLLARDGG
FIAPGYDADLDEARTLRDEGRSVIARMQGEYAERAGVSSLKIKHNNVLGYFIETTATHAE
KMMSPPLNETFIHRQTTANQVRFTTVELTELETRILNAGNEALEIEKRLFARLREAILDE
APALSETGLALSEFDLALGLADLSSAQGWARPQVDDSRAFEIEAGRHPVVERALQAQGAG
PFIANDCGLNAEGESAAVTLLTGPNMAGKSTYLRQNALIALLAQMGCYVPAQRAHIGLVS
QIFSRVGASDDLARGRSTFMVEMVETAAILNLADDRALVILDEIGRGTATYDGLSIAWAT
LEHLHGVNRVRGLFATHYHELTVLAGKLDGVTNATVAVKEWDGEVIFLHEVREGAADRSY
GVQVAQLAGLPKAVIDRARTVLDALEQGERERAAPKALIDDLPLFSAAAVAPPPQAGPAG
PSPVEEKLSTIRPDDMSPREALQAIYELKGLLDSAG
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgcaatatctggagatcaaggcggatcaccccgatgcgctgctgttctaccgg
atgggcgatttctacgagctgttcttcgacgacgcggcggcggcggccgaggcgctggac
atcgcgctgaccaagcgcggcaagcatgcgggcgaggatatcccgatgtgcggcgtgccg
gtgcatgccgccgagggctatctgctgacgctgatccgcaaggggttccgggtggctgtc
tgcgagcagctcgagagcccggcggaggccaagaaacgcggcggcaaatccgtggtcaag
cgcggcgttgtgcgactggtcaccccgggcacgctgatcgaggattcgctgctggaggcg
cggcggcacaactacctggccgctttggcacgggttcgggacgaatgggcgctggcctgg
gccgatatctccaccggcgcgtttcacgtgatgccgctgggacaggcgcggatcggcgcg
gagctggcgcggctggcgccgtcggaactgctggtctccgaagatgtcggcgagacgctg
cgcgaggtgctgggcgatctcggtgtgtttccgacggtgctgggccgggcctccttcgat
tccagcggtgccgaggcgcggctctgcacgctttacggggtgcagacgttggccggcttc
ggcagtttcgcgcgctgcgagctggcggcgatgggcgccttggtcgattatctcgacatc
acccagaaaggccggctgccgctgctgcgcgcaccgcagcgcgacgcggtctcgcgcatg
ttgcagatcgacgcggcgacgcggcgcaatctggaactgacccagtcgatgaatggcgga
cggcagggctcgctgctctcggtgatcgaccgcacggtgaccccgggcggcgcgcggctg
ctggagcggcgcgtgtcgtcgccctcgcgcgagctggacgtgatcgcgcggcggctggca
gcgctggactgggcgatcgagagcccgcagggctcggcgctgcgcgacgcgctgcgcaag
gtgcccgatctcgaccgggccctgtcgcgcctcgggctcgaccgtggcggcccccgcgat
ctggcagcggtgcgcaacgcgctggaacaggccgaggagatcgcgcaagcgctcgacgag
gccaccctgcccgagctgctggcagaggcgcgcgcggccctgcgtgggcatgacgacctg
ctcgccctgctcgacgcggcactggtcgccgaaccgccgcttctggcgcgcgatggcggc
ttcatcgcgccgggctacgatgccgatctcgacgaggcccgcactctgcgcgacgaaggc
cgcagcgtgatcgcccgcatgcagggcgagtatgccgagcgtgccggggtttcctcgctg
aagatcaagcacaacaacgtgctgggctatttcatcgaaaccaccgcgacccatgcggaa
aagatgatgtcgccgccgctgaacgagaccttcatccaccgccagaccaccgccaatcag
gtgcgctttaccacggtcgaactgaccgagctggaaacccgcatcctgaatgcgggaaac
gaggcgctggagatcgagaagcgcctcttcgcccggctgcgcgaggccattctcgacgag
gcaccggcgctttcggagaccgggctggcgctttcggaattcgacctggcgctggggctg
gcggatctctccagcgcgcagggctgggcgcggccgcaggtcgatgacagccgcgccttc
gagatcgaggccggacgccacccggtggtggagcgcgccttgcaggcccagggcgcgggg
cctttcatcgccaacgattgcgggctcaacgccgaaggcgaaagcgccgcggtgacactg
ctcacaggtccgaacatggccggtaaatccacctatctgcggcagaacgcgctgatcgcg
ctgctggcgcagatgggctgctacgtgcccgcgcagcgcgcccatatcgggctggtgagc
cagatcttcagccgcgtcggcgcctccgacgatctggcgcgcgggcgctcgaccttcatg
gtcgagatggtcgagaccgccgcgatcctcaacctcgccgacgaccgggcgctggtgatc
ctcgacgagatcgggcgcggcaccgccacctatgacgggctctccatcgcctgggcaacg
ctggagcatctgcacggcgtcaaccgggtgcgcgggcttttcgccacccattaccacgag
ctgacggtgctggcgggcaagcttgacggcgtgaccaatgccacggtggcggtgaaggaa
tgggacggcgaggtgatcttcctgcacgaggtgcgcgagggcgcggcggatcgctcctat
ggcgtgcaggtggcgcagcttgccgggttgccgaaagcggtgatcgaccgcgcgcggacg
gtgctggatgcgctggaacagggcgaacgcgagcgggccgcgcccaaggcgctgatcgac
gatctgccgctgttctctgccgccgccgtggcgccaccgccgcaggccggccccgctggg
ccctcgcctgtcgaggagaagctctccacgatacggcctgacgacatgtcgccgcgcgag
gccttgcaggcgatctatgagctgaaggggctgctggacagcgccggctga
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