Cutibacterium acnes KPA171202: PPA1029
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Entry
PPA1029 CDS
T00188
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
pac
Cutibacterium acnes KPA171202
Brite
KEGG Orthology (KO) [BR:
pac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pac03019
]
PPA1029
Enzymes [BR:
pac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PPA1029
Messenger RNA biogenesis [BR:
pac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PPA1029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
FtsK_SpoIIIE
HA2_N
nSTAND3
NACHT
AAA_23
AAA_30
T2SSE
TsaE
ResIII
PhoH
SLFN-g3_helicase
AAA_16
Ploopntkinase3
Motif
Other DBs
NCBI-ProteinID:
AAT82781
UniProt:
Q6A8Y5
LinkDB
All DBs
Position
1116155..1120240
Genome browser
AA seq
1361 aa
AA seq
DB search
MPNSRLEGELPGGGVVTFDTDLPIAAHADEIADLIKHHQVVVVAGETGSGKTTQLPKICL
ALGRRQIAHTQPRRIAARSVAERVAEEMGVELGEQVGYQVRFTRRASSDTALTVMTDGVL
LAEISHDRDLCAHDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDTARFS
AHFDDAPVIEVSGRTYPVEVRYRPLDPSEQIRPDDEDDIDDEDELLHRPSAPSLTSPDDE
VVDQVTGICRAVQELCREESGDILVFLAGEQEIRETAEALADLNLSNTEVLPLFARLSAA
EQHRVFTPHTGRRIVLATNVAETSLTVPGIRYVIDPGTARISRYSVRTKVQRLPIEPVSQ
ASANQRAGRCGRVAPGICIRLYSQTSFESRPEFTEPEILRTNLAAVILQMAQARLGAITD
FPFVEAPDRSRINDGIRLLDELGALKPGHRDASRLTKIGHQLARVPLDPRLGRMLLEGAR
QGSLAEVLVIVAALSIRDVRERPADKREEADAFHRRFATEANLLQTLQAADNTDNNQVGD
WSQVRRQHIHQEAANTAKPGPPARHTPHTRGKISPRPQAGGIDEGGDIMAIHRLWRYLRH
QRRQMGSSAFRRMCRAEYINYLRVREWDDLHGQLRQIAKELHLEVNRTSAPTDRVLVALL
SGLLSHIGLVQVRQPAKRHGQRPGPQEYLGARGTKFAINPGSLLARKSPELVVAVELVET
SRLWARTVAAVQPEWVEEVAGPLIRRSWAVPHWAASTASVVATERGTLFGVPLWADRRVT
YGRIDPVASRQIFIRSALVERNWRSDHGFLKHNDRVRDEAADLEERSRQRGLVADDDAIF
AFYDRRIPDGIVSGSHFDAWWRRVQDRHQLDLSIDDLVDSGSVDADAFPDHWKVGNLELP
VRYVFEPGSGHDGVTVTIPLALLNQVPTAPFSWQVPGLRTELATELIRALPKRIRTQLVP
APDRARAALTWLEDHDADRHAPFTNELGRALRTLTGVIINPDDWNIAAIPAHLRIGFDIT
DAEGRPVGKKSKKNGKDKLKGSQPAPIARSEDLDALQTDLAPKVSQSLTKAAGQPQIHGA
KEWTFDPIPKRVDLSRKGPDAVGYPCLVDEGDSVGTTVLDTPRAQRTSHASGVVKLLVLN
LPDPTKWVVTHMDNATKLALATSPYPSVPALLADARHKAVASVAQEKAGDLSGIRDKKTF
DDLALVVRQDQADRMARVVRTAGRILSRVVAARQALATVSDPAIHADIVAQIDDLVFENF
ISATPDPWYDDMPRWIQGVSVRIESLMTNPSRDPRQMAELEPLLADYDALCEEQPAGKLP
AEVEEIGFMLEELRVQYFAQKLGTRVSVSPKRIRMAIAKLS
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgcctaattcacgactggaaggtgagctgcctggtgggggagtcgtcaccttcgacact
gaccttccgatagcggcacacgccgacgagattgctgacctcatcaagcaccaccaagtc
gtggtggtggcaggcgagaccggttcgggaaagacgacccagctgcccaagatctgcctg
gccttgggacgtcgtcagattgcccatacccagccccgacggatcgccgcgcgcagcgtc
gcagaacgagttgccgaggaaatgggggtcgagctgggggaacaggtcggctatcaagtg
cgcttcacccggcgcgcttcctccgacaccgcactgactgtcatgactgacggagtactg
cttgctgagatttcccacgatcgcgacttgtgcgcccatgacaccatcattattgacgag
gctcacgagcgcagcctcaatatcgacttcttgctgggttacctgaaacagttgctgcca
cgacgtccagacctcaaagtcatcatcacctcggccactatcgacaccgccaggttttcc
gcccacttcgacgacgcgccagttattgaggtctcggggcgcacgtaccccgttgaggtg
cgttatcgcccgctggatccctctgagcaaatccgccccgatgacgaagatgacattgac
gacgaagatgagctcctccatcgtccatcagccccgtccctgacgagcccggatgacgag
gttgtcgaccaagtcaccggtatctgccgggcggtccaggaactttgccgcgaggagagc
ggtgacatcctggtattcctagctggtgagcaggagatccgcgagaccgccgaggcgctg
gcggacctcaatctgtctaacaccgaagtcctgccactctttgcccgcctgtcggccgca
gaacagcatcgggttttcactccgcataccggacgacggatcgtgctggccaccaacgtc
gccgagacctccctgaccgtgcctggaatccgctacgtcattgatccgggaactgcccgt
atctcgcggtactcggtgcgcaccaaggtccagcgcctgcctatcgagccggtctcccag
gccagcgccaaccagcgcgccggacgatgtggccgcgtggcaccgggcatctgcatccgg
ctgtattcccagaccagtttcgagtctcgtcccgaattcaccgagccggagatcctgcgc
accaatttagccgcggtcatcctccagatggcccaggccaggctcggagccatcaccgac
tttcctttcgtcgaagccccggaccgctcccggatcaatgacggaatccggctcctcgac
gaactaggagctctcaaaccgggacaccgtgacgcttcgcgcctaacaaagatcggacac
cagctggcccgggtgccattggacccacggctgggacgtatgctccttgaaggagcgagg
caaggtagcctggccgaggtcttggtcatcgtcgcggctctatcgattcgcgacgtccgg
gagcgtcccgcagataagcgcgaggaggccgacgcttttcatcgccgttttgccaccgaa
gccaacctactgcagaccctccaagcggccgacaacaccgataacaaccaggtgggggat
tggtctcaggtccgccgccagcatattcaccaggaggccgccaacactgctaaaccagga
cctccggcacgtcataccccgcacaccagggggaagatctccccacgcccccaggcgggc
ggcattgacgagggtggcgacatcatggccatccaccggctatggcgttacctgcgccac
cagcgtcgtcaaatggggtcctcagccttccgccgaatgtgtcgggccgagtacatcaac
tatctgcgggtgcgtgagtgggacgatttgcacggccaactccgccagatcgccaaggaa
ctgcacctggaggtcaaccgcacctcagccccaaccgaccgggttcttgttgccctactc
tcgggactgttgtctcacatcgggctggtccaggtccggcagccggccaaacggcacggc
cagcgccccgggcctcaggaatacctcggtgctcgcggcacgaagttcgccattaatccc
ggatcgctgctggcgcgtaagtcgcccgaacttgtcgtggctgttgagctcgtggagacc
tctcggctgtgggccaggacagttgccgccgtccagcccgagtgggtggaggaggttgcg
ggccctctcatcaggcgttcctgggcggttccgcattgggcagcatcaacagcgtcagtg
gtcgctactgagcgtggcaccctctttggggtgccgttatgggctgaccgtcgcgtcacc
tatggccgcatcgatccggtggcgtcccgacagatttttatccgttcggctctcgtagag
cggaactggcgatccgatcatggattcctcaaacacaacgatcgagttcgcgacgaggcc
gcagatcttgaggagcgcagtcgtcagcgcggcctggtagccgacgacgacgccatcttc
gctttttacgaccgtcggattcctgacgggatcgtctctggttcccatttcgacgcttgg
tggcgtcgggtgcaagaccgtcaccagcttgacttgtcgatcgacgatctcgtcgactcc
ggctccgtagacgccgacgctttccctgaccactggaaagtcggaaacctcgaacttcca
gtgcgctacgtttttgagccgggatccgggcacgacggcgtcaccgtcactatcccgcta
gcactgctcaaccaggtgcccacagcaccgttcagctggcaggtgccaggcttgcgcacc
gagttggcgacggaactcattcgcgcccttcctaagcgcattcgcactcaactggtacct
gcccccgaccgtgcccgagcggcgctaacctggctggaagaccacgatgctgaccgccac
gcccccttcaccaatgaactcggacgagccctgagaactctcaccggggtcatcatcaac
cctgatgactggaatattgccgctatcccggcccatttgcggattggtttcgacattact
gacgccgagggaagacctgtcggtaagaaatccaaaaagaatggtaaggacaaactcaag
ggatctcagcccgcacccattgcccgctccgaggatctcgacgccctgcagactgatttg
gctcccaaggtgtcccaatctttgactaaggccgcgggccaaccccagatccacggtgcg
aaggagtggaccttcgacccaattccgaaacgggttgatctgtcgcgcaagggccctgac
gccgtcggctacccatgcctggtcgatgaaggtgactccgtcggcaccaccgtcctcgac
actcctcgtgcccagcgcaccagccatgcttccggcgtcgtgaagttgcttgtcctcaac
cttcctgacccgacgaagtgggttgttacgcatatggataacgccaccaagctggccctg
gcaacgtctccgtaccccagcgtcccagccttactggccgatgcccgtcataaggcggtg
gcttcggtggctcaggagaaggcgggtgatctgtcagggattcgcgacaagaagacattc
gacgacctcgctctagtcgttcgtcaagaccaggccgaccggatggctcgagtggtgcgt
actgctggcaggatcctcagtcgtgtcgtcgctgctcgtcaggctctggcaactgtctcg
gatccggcgatccatgctgacatcgttgctcagattgatgacctcgtcttcgagaatttc
atttcggccaccccggacccttggtatgacgacatgccgcgctggattcagggggtgagc
gtgcggatcgagtccctgatgaccaacccttcacgcgatccccgccagatggccgagctg
gagcctctcctggccgactatgacgccctgtgcgaggagcaaccggctggaaaactaccc
gccgaggtcgaggagattgggttcatgctggaggagttgcgcgtccagtacttcgctcaa
aaactcggtactcgtgtcagtgtgtcacccaagcgaattcgtatggcgatagccaagctg
tcctaa
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