Arcobacter acticola: AACT_1314
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Entry
AACT_1314 CDS
T06605
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
paco
Arcobacter acticola
Pathway
paco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AACT_1314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paco03019
]
AACT_1314
Enzymes [BR:
paco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AACT_1314
Messenger RNA biogenesis [BR:
paco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AACT_1314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QKE28487
UniProt:
A0A6M8EVH8
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All DBs
Position
1299649..1300875
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AA seq
408 aa
AA seq
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MSFSHLGLSLEINKALNENAYKIPSKIQEKVIPLILEKKDVMARAQTGSGKTASFVLPIL
QLWNEKKYEGKAKIKVLILTPTRELALQVSQSFELFSKYLEKKPKLVTIIGGKSIGDQLL
DIQKGCDIVVATTGRLNDILDKKQMNLSALEFFVLDEADKMLDFGFEEELELLLKQIPKE
RQNLLFSATYPLKVQNIIAKITREAIEVFIEDEAPTVQTINQRLIEVNKENRSPLLRNLI
ENHSWEQILVFMANKRSCDNIAAKFRKYGLNAESFHGDLLQDERNETLQDFKDKKIKILF
ATDIAARGLHIDDISCVVNFDLPRAPADYIHRIGRTGRAGKSGNAISFIGLEDFEHFALI
EKKCDLKLQREQIEKFELIGKPLEKEKGKEPIKGKRLSKKDKLRQQKL
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttcacacttaggtctaagcctagaaataaataaagcactaaatgagaatgct
tataaaataccaagtaaaattcaagaaaaagtaattcctttaattttagaaaaaaaagat
gtgatggcaagagcccagacaggtagcggaaaaactgcgagttttgttttacctatttta
caactttggaatgaaaaaaagtatgaaggaaaagcaaaaattaaagttttgattctaaca
ccaactcgagaattagctcttcaagtatctcaatcttttgaattgttttctaaatactta
gaaaagaaaccaaaactagttactattattggtggtaaaagtattggtgatcagcttttg
gatatacaaaaaggttgtgatattgttgtggcaaccactggtaggctaaatgatatctta
gataaaaaacagatgaatttatcagcacttgaattttttgttttagatgaagcagataag
atgcttgattttggttttgaagaagaattagaactacttttaaaacaaattccaaaggaa
agacaaaatttacttttttcagcaacttatcctttaaaagttcaaaatattattgcaaaa
atcacaagagaagcaatagaagttttcatagaagatgaagcaccaacagtgcaaactata
aatcaaaggctaatagaagttaataaagagaacagaagcccacttttaagaaatctaata
gaaaaccattcttgggagcaaatacttgttttcatggctaataaacgttcttgtgacaat
atagctgcaaaatttagaaaatatggtttaaatgcagaatcatttcatggtgatttactt
caagatgaaagaaatgaaacactacaagattttaaagataagaaaataaaaatcttattt
gctacagatattgcagcacgtggtttgcatatagatgatatttcatgtgtagtaaatttt
gatttaccaagggcacctgctgattatattcatagaattggaagaactggacgagctggg
aaaagtggaaatgcaatctcttttataggattagaagattttgaacattttgctttaatt
gaaaaaaaatgtgatttaaaactccaaagagaacagatagaaaaatttgaattaatagga
aaaccattagaaaaagaaaaagggaaagaacctataaaaggtaaaagattaagtaaaaaa
gataaactaagacagcaaaagctttaa
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