Paraburkholderia acidisoli: FAZ98_08890
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Entry
FAZ98_08890 CDS
T07287
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pacs
Paraburkholderia acidisoli
Pathway
pacs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pacs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FAZ98_08890 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacs03400
]
FAZ98_08890 (uvrB)
DNA repair and recombination proteins [BR:
pacs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FAZ98_08890 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FAZ98_08890 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
UB2H
Kinesin
AAA_16
UvrD-helicase
AAA_22
FlaG
Motif
Other DBs
NCBI-ProteinID:
QGZ61839
UniProt:
A0A7Z2JFT6
LinkDB
All DBs
Position
1:complement(2041655..2043736)
Genome browser
AA seq
693 aa
AA seq
DB search
MSDSTVADAPALDESKFVTYEGSPFQLYQPYLPAGDQPTAIETLVEGVEDGLSFQTLLGV
TGSGKTYTMANTIARLGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPEA
YVPQRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSAIYGIGNPSEYHQMILT
LRQGDKLGQRDVIARLIAMQYSRNEQDFQRGTFRVRGDTIDIFPAEHAEMAVRVELFDDE
VETLQLFDPLTGRVRQKIPRFTVYPSSHYVTPRETVMRAIETIKSELRERLEFFHGDGKL
VEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGALPGEPPPTLVDYLPGDAVMFLDES
HVLIGQLNGMYNGDRARKENLVDYGFRLPSALDNRPLKFNEFERKMRQVVFVSATPADYE
KRVTGQIAEQVVRPTGLVDPVIEVRPASTQVDDVLSEINARVEVGERVLVTTLTKRMAEQ
LTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAIL
DSDKEGFLRAERSLIQTIGRAARNVNGKAILYGDRITDSMRRAIDETERRRAKQMAFNEE
NGIVPRGVVKRIKDIIDGVYNVDEARAELREEQERAKFEDMSEKQIAKEIKKIEKQMMDY
AKNLEFEKAAQARDQLAVLRQRVFGANVGDHPA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactctaccgtcgccgacgcgcccgcgctcgacgagtccaaattcgtcacttac
gaaggctcgccgttccagctttatcagccgtacctgccggccggcgaccagccgacggcg
atcgagacgctcgtggaaggcgtggaggacggtctctcgttccagaccctgctgggcgtg
acgggctcgggcaagacctacacgatggccaacaccattgcgcggcttggccgcccggcc
atcgtgttcgcgccgaacaagacgctcgccgcgcagctgtacgccgaattccgcgagttc
tttccgcgcaacgccgtcgagtacttcgtctcgtactacgactattaccagccggaagcc
tacgtgccgcaacgcgatctcttcatcgagaaggattcgtcgatcaacgagcacatcgag
cagatgcggctttcggccaccaagagcctgatggagcggcgcgacgtggtgatcgtcgcg
accgtttcggcgatctacggtattggcaatccgtccgagtatcaccagatgattctcacg
ctgcgccagggcgacaagctcggccagcgcgacgtcatcgcgcgcctgatcgccatgcag
tacagccgcaacgagcaggacttccagcgcggcacgttccgcgtgcgcggcgacaccatc
gacattttcccggccgaacacgccgaaatggccgtgcgcgtggaactcttcgacgacgaa
gtggaaacgctgcaactgttcgatccgctcacgggccgcgtgcgccagaagattccgcgc
tttacggtgtatccgtcgtcgcactacgtgacgccgcgcgagaccgtgatgcgcgcgatc
gagacgatcaagagcgagttgcgcgagcggctcgaattcttccatggcgacggcaagctg
gtggaagcgcagcgcctcgagcagcgcacccgtttcgacctggaaatgctccaggagctg
ggcttctgcaagggcatcgagaactattcgcggcacttctccggcgcgctgccgggcgag
ccgccgcccacgctcgtcgattacctgcccggcgacgccgtgatgttcctcgacgaatcg
cacgtgctgatcggccagctcaacggcatgtataacggcgaccgcgcgcgcaaggagaat
ctcgtcgattacggcttccgcctgccttcggcgctcgacaaccggccgctcaagttcaac
gagttcgagcgcaagatgcgccaggtcgtgttcgtctcggccacgcccgccgactacgag
aaaagggttacgggccagatcgcggaacaggtggtgcggcccacggggcttgtcgacccg
gtgatcgaggtgcggcccgcgtccacccaggtcgacgacgtgctgtccgagatcaacgcg
cgtgtggaagtgggcgagcgcgtgctcgtcaccacgctcaccaagcgcatggccgagcag
ctcacggaattcctcgccgaccacggcgtgaaggtgcgctatctgcacagcgacatcgac
acggtcgagcgcgtggaaatcatccgcgacctgcggctgggcacgttcgacgtgctggtc
ggcatcaacctgctgcgcgagggcctggatattcccgaagtttcgctcgtggcgattctc
gactccgacaaggagggcttcctgcgcgccgagcgctcgctgatccagaccatcggacgg
gccgcgcgtaacgtgaacggcaaggcgatcctctacggcgaccgcattaccgactcgatg
cgccgcgccatcgacgaaaccgaacgccgccgcgccaagcagatggccttcaacgaagaa
aacggcatcgtgccgcgcggcgtggtcaagcgcatcaaggacatcatcgacggcgtttac
aacgtggacgaggcgcgcgccgaactgcgcgaggagcaggagcgcgcgaagttcgaggac
atgtccgagaagcagatcgcaaaggaaatcaagaagatcgagaagcagatgatggactac
gcgaagaatctcgaattcgagaaggccgcgcaggcgcgcgaccagctggcggtgttgcgc
cagcgcgtgttcggggccaacgtgggcgatcatccggcctaa
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