Pygoscelis adeliae (Adelie penguin): 103922024
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Entry
103922024 CDS
T06012
Symbol
TRPM1
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily M member 1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
padl04040
]
103922024 (TRPM1)
Ion channels [BR:
padl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103922024 (TRPM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM_tetra
Ion_trans
LSDAT_prok
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
103922024
NCBI-ProteinID:
XP_009328369
LinkDB
All DBs
Position
Unknown
AA seq
1648 aa
AA seq
DB search
MASLNTCELAKSGSEQGQKAWIEKTFSKRECIYVIANNKDVSRCCCGQLISQHIPPPPSI
TANKNGEETKQVEAQPEKWSVSKHTQTYPTDAYGNLEFQGGGHSNKAMYIRVSYDTKPDS
LLHLMVKDWQLELPKLLISVHGGLQNFEMQPKLKQVFGKGLIKAAMTTGAWIFTGGVSTG
VIRHVGDALKDHSSKSRGRICAIGIAPWGIVENKEDLIGKDVTRVYQTMSNPLSKLSVLN
SSHTHFILADNGTLGKYGAEVKLRRQLEKHISLQKINTRLGQGVPVVGLIVEGGPNVISI
VLECLREEPPLPVVICDGSGRASDILSFAHKYSEEGGVISESLRDQLLVTIQKTFNYNRN
QAHQLFIILMECMKKKELMTVFRMGSEGQQDIEMSILTALLKGTNASAPDQLSLALAWNR
VDIARSQIFVFGHHWPPLASLTAPDGTAPEKEKKSPAAQPKAARGKGKGKKKGGKGKEEP
EEETDPRKLELLNWVNSLEQAMLDALVLDRVDFVKLLIENGVNMQHFLTIPRLEELYNTR
LGPPNTLHLLVRDVKKGNLPPDYHISLIDIGLVLEYLMGGAYRCNYTRKSFRTLYNNLFG
PKRPKALKLLGMEDDEPPTKGKKKKKKKKKEEEIDIDVDDPEVSRFQYPFHELMVWAVLM
KRQKMALFLWQRGEETMAKALVACKLYKSMAHESSESELVDDISQDLDNNSKDFGQLAVE
LLDQSYKHDEQIAMKLLTYELKNWSNSTCLKLAVAAKHRDFIAHTCSQMLLTDMWMGRLR
MRKNPGLKVIMGILFPPTILFLEFRSYDDYSYQTSRQNEEGREKEEENVDANVDTGSRKG
DEENGNKNQKSLPIGTKIYEFYNAPIVKFWFYTISYLGYLMLFNYIILVRMERWPSVQEW
IVISYIVTLALEKVREILMSEPGKLSQKVKVWLQEYWNITDLVAISVFMIGAILRLQNQP
YMGYGRVIYCVDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVVIMLVVLMSFGV
ARQAILHPDEEPSWRLARNIFYMPYWMIYGEVFADQIDLYAMEINPPCGDNLYDDDGKRL
PPCIPGAWLTPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTFH
DRPVLPPPMIIFSHIYIIIKRICCRCKKGEGDQDERDRGLKLFLNDEELKKLYEFEEQCV
EEYFQEKEDEQQSSNDERIRVTSERVENMSMRLEEVNEREHFMKASLQTVDLRLSQLEEL
SGRMVNALEKLAGIDKSELTYTRSRASSECDAAYLLRQSSVNSSDGYSMYRYHVGGDELT
YDDGTTPMSPAMGLRKKAHSVSTKEDGADPRMLVPEHHSSLNYTSSANAVTTADYGKSTL
EIAQNVSRPHSGPGGFGDEKQGIFKSDGIVPQSINQMDAVSNRQSVPRSDFQNTQLKVER
TKLEATVXLDKSKAMRYFPAETFSACQTTMMKSRSFIFAQGGKLVGGVNNWTTEYSTIID
QVCPSTIEQWATEWKYEVEQQLSQERPPEYPGFISEAERQAEQKQLQMDTDDDSDVGEAG
MRASYTSMPATVGAEKENLLSVKPEKTSGFPSLRSKSLHSHSRKAKSVKDKLNRPGHASS
VTNLVVAFGSATEEQKARQENASTETEC
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggcatccttgaatacctgtgaattagcaaaatctggttctgaacagggtcaaaaggct
tggatagagaagaccttttcaaaaagagaatgcatctatgtaattgcgaacaacaaagac
gttagcaggtgctgctgtggccagctcattagccaacatattccacctcctccaagtata
acagctaataaaaatggagaagaaacaaagcaagtggaagctcagccagagaaatggtcc
gtcagtaaacacactcaaacatacccaactgatgcctatggaaaccttgaattccaagga
ggaggacattcaaataaggccatgtatatccgtgtgtcatatgacactaaaccagattct
ctgctgcatctcatggtgaaagactggcaactggagctgcccaaactcttaatctctgtc
catggaggcctccagaactttgaaatgcaacctaaattaaagcaagtattcggaaaaggt
ctgataaaggctgccatgaccacaggagcttggattttcactggaggtgttagtacaggt
gtcattcgtcatgtgggagatgccttgaaagatcattcttccaaatccagaggacgaata
tgtgccataggaattgcaccgtggggcattgtagaaaacaaggaagatctgataggaaaa
gatgtaacacgggtttaccaaacaatgtcaaaccctctaagtaagctctctgtgctcaac
agttcccatacccacttcattctggcagacaatggtacgctaggtaaatacggagctgaa
gtaaagttacgacgacagttggaaaaacacatttccctccagaaaattaacacacggctg
ggacaaggtgttcctgtagttgggctcatagtggaagggggtcctaacgtgatctccatt
gtcttagagtgtctacgagaagaaccccctctccctgtcgtgatatgtgatggtagcgga
cgagcatcagatattctgtcatttgcacacaagtattcagaagaaggaggggtaataagc
gaatcccttagggaccagcttctagttaccatccagaaaacctttaactacaacagaaat
caagctcatcagctgttcatcattcttatggagtgcatgaaaaaaaaagaacttatgacc
gtgttccgcatggggtctgaagggcaacaggacattgagatgtctatcttaactgctctc
ctcaaaggtaccaatgcatctgctccagaccagctcagcttggctttggcctggaatcgt
gtagacattgcacgcagccaaatctttgtcttcggacaccactggccacctttagcaagc
cttacagctcctgatggtacagctcctgagaaagaaaagaaatctccagcagctcagcct
aaagcagccagagggaaaggaaaagggaagaagaagggaggaaaaggaaaagaagagcca
gaagaagaaacagacccaagaaaacttgaactcctgaactgggtgaattccctggagcag
gctatgctggatgcgctggttctggatcgagtggactttgtgaaactacttattgagaat
ggagtgaacatgcagcacttcctcactattcctcgactggaagaactttacaataccaga
ttgggtccaccaaatacgctgcatttgctagtcagagatgtgaaaaagggaaatcttcca
ccagattatcacatcagcctaatagatattggtcttgtacttgaatatctcatgggtgga
gcttatcgctgcaactatactcgaaaaagttttcggactctttataataatttatttgga
ccaaagaggccaaaagctcttaaactactagggatggaggatgatgagcctcccaccaaa
gggaagaagaagaagaagaagaagaaaaaggaggaagagatcgatattgatgtggatgac
ccggaagtcagccgctttcagtatccctttcatgaactgatggtatgggccgtgctgatg
aaacggcaaaagatggcactcttcctttggcagcgaggggaggaaaccatggccaaggca
cttgtggcctgtaaactgtacaagtctatggcccatgagtcttccgagagtgaactggtg
gacgacatctctcaggatctggacaacaactcaaaagattttggccagctggctgttgaa
ctcttggatcagtcctataaacatgatgagcagattgccatgaaactactgacctacgaa
ctgaaaaactggagtaattccacctgcttgaaattggctgtggcagctaaacacagggac
ttcattgctcacacatgcagccagatgctcttaacagatatgtggatggggcgactacgc
atgcggaaaaacccaggccttaaggttataatggggattctcttccctcccaccatcctt
ttcctagagtttcggagttacgatgattattcttaccagacatcaagacaaaatgaggaa
ggcagagaaaaggaggaggaaaatgtggatgcaaatgtggatacaggctcccgaaaagga
gatgaagagaatggaaataaaaaccaaaagagccttccaattggaacaaagatctatgaa
ttctataatgcacctattgtcaaattttggttctacacaatatcatacctcggttacttg
atgctatttaattatattatcttggtgcggatggaacggtggccatcagtccaggaatgg
attgtcatctcctacattgtgacattggctttagagaaagtaagagagattctgatgtca
gagcctggcaagctgagccaaaaagtgaaagtttggctccaggaatactggaatattact
gacctggtggctatttcagtatttatgataggagcaattcttcgcctacagaaccagcct
tacatgggttatggaagagtgatttactgcgtagatatcattttctggtacattagagta
ctagatatctttggtgtgaacaaatatctgggaccttacgtcatgatgattggaaagatg
atgattgacatgctctactttgtggttatcatgcttgtggttctgatgagttttggagta
gcccgccaagctatcctgcacccagatgaggagccttcttggagactagctcgcaacatc
ttctatatgccctactggatgatctatggagaggtgtttgcagaccagatagacctctat
gccatggaaattaatcctccttgtggggacaatctttatgatgatgatggtaaacgcctc
cctccatgtataccaggggcctggctcactcctgctattatggcctgttacctcttggta
gcaaatatcctgttggtaaacctgctgattgctgtcttcaacaataccttctttgaggta
aaatcaatatccaaccaagtctggaagttccagcggtaccagctgatcatgacgttccat
gatagacctgtcctcccaccaccaatgattatcttcagccacatctacataatcatcaag
cgaatctgctgtcgctgcaagaagggtgaaggagaccaggatgagcgtgacaggggactg
aagttatttctgaatgatgaagagctaaaaaaactgtatgagtttgaagagcagtgtgta
gaagaatacttccaggaaaaagaggatgagcaacaatcatctaatgatgaacgcatcaga
gttacctctgaaagagttgaaaatatgtctatgaggctagaagaagtgaatgaaagagaa
cattttatgaaagcttctcttcaaacagtcgaccttcgactctctcaattggaagaacta
tctggtcggatggtgaatgctcttgagaagctggcaggtattgacaaatctgagctgaca
tatacacgttcacgggcttcgtccgagtgtgatgctgcatatctcctaaggcaaagcagt
gttaacagctctgatggctacagtatgtacagataccatgtcggtggcgatgagttaaca
tatgatgacggtaccactcctatgtcaccagccatgggattgcgtaaaaaagcccattct
gttagtaccaaagaagatggagcagacccaaggatgctggttccagaacaccactccagt
ctcaattatacctctagtgctaatgcagtcaccacagcagattacggtaaatctacatta
gaaattgcacagaatgtttccagaccccattctggtccaggtggttttggggatgaaaag
caggggattttcaagagcgatggaattgttcctcaaagtataaaccagatggatgctgtt
tcaaacagacagtcggtaccaagatcagattttcagaacactcagttaaaagtagaacgt
accaagttagaagccaccgtcntcttggacaaatctaaagcaatgcgctattttccggct
gaaacattcagtgcttgtcaaaccactatgatgaagtcaaggagctttatatttgcacag
ggtgggaagctggttggaggagttaacaattggaccacagaatatagtaccatcatcgat
caggtgtgcccttctacaattgaacaatgggccacagagtggaaatacgaagttgagcag
caactttctcaagaacgtccaccagaataccctggttttatctctgaagcagaaaggcaa
gcagagcagaaacagttacagatggacacagatgatgacagtgatgttggtgaagcaggt
atgagagcctcttacacctctatgcctgccactgtcggggctgagaaagagaatttacta
tcagtaaagccagaaaagacttctgggttcccatcactacggtcaaagagtttgcacagc
cattctcggaaagccaagtctgtaaaggacaaattaaatagaccaggacatgccagcagt
gtaactaatttggtggtagcatttggcagtgcaacagaagaacagaaagctaggcaagaa
aatgcatccacagaaaccgaatgttaa
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integrated database retrieval system
